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BMC type: RMM2


Organism: Proteobacteria bacterium TMED61. Bacteria; Proteobacteria.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       CBC21_02530 (fasta)
               CBC21_02535 (fasta) HMMreg12833_4_GRM5 GRM5 (HMM details)
                       CBC21_02545 (fasta)
                             CBC21_02550 (fasta)
                                   CBC21_02555 (fasta)
                                        CBC21_02560 (fasta) HMMnopfamclust3_1 RMM2 (HMM details)
                                               CBC21_02565 (fasta) HMM01636transf_1_rmm RMM2 (HMM details)
                                                        CBC21_02570 (fasta) HMM00202amintr_1_rmm RMM2 (HMM details)
                                                                   CBC21_02575 (fasta) HMMalddh_2_egra RMM2 (HMM details)
                                                                       CBC21_02580 (fasta) Tdp_cinnamon RMM2 (HMM details)
                                                                          CBC21_02585 (fasta) HMMnopfamrmm1_2_rmm1 RMM2 (HMM details)
                                                                           CBC21_02590 (fasta) P_cobaltBlue RMM2 (HMM details)
                                                                             CBC21_02595 (fasta) H_darkIndigo RMM2 (HMM details)
                                                                                 CBC21_02600 (fasta) Tdp_sepia RMM2 (HMM details)
                                                                                     CBC21_02605 (fasta) HMM00857isoch_1_buf1 RMM2 (HMM details)
                                                                                             CBC21_02610 (fasta)
                                                                                                     CBC21_02615 (fasta)
                                                                                                               CBC21_02620 (fasta)
                                                                                                                       CBC21_02625 (fasta) HMM13382deam_1_buf1 BUF1B (HMM details)
                                                                                                                               CBC21_02630 (fasta)
                                                                                                                                            CBC21_02635 (fasta)
                                                                                                                                                    CBC21_02640 (fasta)
                                                                                                                                                      CBC21_02645 (fasta)
                                                                                                                                                                CBC21_02650 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_darkIndigo

BMC-P(map on tree)

       P_cobaltBlue

BMC-Tdp(map on tree)

       Tdp_cinnamon
       Tdp_sepia

(complete list of loci)

Protein sequences:

>CBC21_02530_UniProt_A0A1Z8VK83
MIESQDVDVVEVEVDGYRIVTYSYGKGDNVLFLLNGGPGLPCDYLRDPHIPLADEGYRIVAFDQLGCGNSDRPEDPTLWHISRYVEEVETVRKALGLDHVHLLGQSWGGWLSIEYALTYPAAIRTLILANTCGDLPHLTTELNRMREALGSETVAMMLHHEALGTLDHPEYQAAVTILNYRHVCRLKEWPASLLASVNDWNMGPYGTMQGPNEFLYIGNLKDWNRIPDMHRLEMPALIITGTHDEIGPACALKMANVLPNSEVAIFPNSSHVPFYEEPADYFDALKNFLDRQS

>CBC21_02535_UniProt_A0A1Z8VJV0
MNSSLPSKVLASAASGVIPLIEANHGDPELIFGRSGIRFKDIENPNNELALGQFCRLFTEAAQQTGNDNFGLHFGSDFEPRRLGAIGYAAISSPTLAAGLRNMETHFPAHQGQSSFGLIRDDDMLWLSYRVNDPQINDRRHDAELSMGMFLNIFRHALGPNWCPLEIRFEHSRPENHQEHETLFGAPVQFGRRTNALAFRPTDLDIKMPTADPYLYSIVEAFLQSRCDLHDNPETFSESVRNQIKLNLSTTIPTVAEIAQLFDLSDDEFQHELNAHRLSFKRLLRSAREELSLHYLDNYDLPLTEVAMLLGYSELSAFSRAFRKWTGMSPQKYRQSHRKSPKPHTV

>CBC21_02545_UniProt_A0A1Z8VKC3
MSPEPILRLEGVSKYFGXFTALDNINLEIDEGEFLTIVGPSGSGKTTLIRILVGIEELSKGKIWLRDERIEEMPANLRPTCMVFQSLALFPHRSVGENIEFPLXLRKQRPDDRXARAFELLDLLHLPRSXYQKRISECSGGERQRVALARALAFDPEILFFDEPLSAXDFRLRKNLEKELKDLHXRTGKTFVYITHSLEEAMVMSDRIAIMRSGHFEQIAVADEIYARPISRFVAEFMGEVNLFSVKGDVSGNLVGTEIDIQTGRVGPDSGMRLAQGXSATLMVRPESVHFLSEDSTADFMVEGVLQAEYALGSRTQYKIQADNXDELAVEKLREDRFPGKIGXRVRLGWNAEYAHMXTEE

>CBC21_02550_UniProt_A0A1Z8VJV6
MERQDQRIGLLSAVPMGLVLLISFLAPLLVXAVFSVMPQKVFSLLHLPDFSSYKLVFTQGYIKSVVWSFGMALASTVILFVVCWPLAFGMAKVFKGFGLFITIAVVVTLFVSENIRLFGWVLTLMKGGLIEGHLRAWTGXTFEGALYNXPVIVFGLVYAYFPFMLFPLIQGIAMVPDDARQAAADLGASRWQIFXEVDLPLSAPGIVIGSLLSFVLAAGAMAESKLLGGQTVIVIADEIETAFTYGQNWPLGSALSIILILIIGALSIFGINRVNLDLIMGGRRS

>CBC21_02555_UniProt_A0A1Z8VJV2
MKMSRSARIALTLYGVLAILFLYLPIISVGFASVSKARYLTFPIKRYATKWYGKAIESSTVQDLLWTSLSVALLVTXISMVVGFFGALAFARYQWRFRGVFQKLILLPIFFPQAVLGLALLLWFNALGIIPTWKTAVVAHLVWISPIATLIIAIRAYSFDPSLEEAARDMGASTWIVMKEITGPLLWPGVVSAGLFAFLLSWGNFPLSLFTTGADSTLPEWLYAKMVSGYSPLVPSVGILSIVTSIVLLLSGVIVMRLIRTRNEASNAR

>CBC21_02560_UniProt_A0A1Z8VJW0
MLTSIKGRSVIVTGGSKGIGKGIAQVFATHGARVMIAARGEAXGMAAVEELKASGADADFCQCDVSDWESVQNMVATTAEKFGGLNVMCANAGGFPQTKMIDMDPSEWDQVMATNLKSAFLCVKAAIPHFEKAGGGRVVLTSSITGPVTGFPGWSHYGASKSGQLGFLKTACMELSRYNVTINAVMPGNIYTEGLQDLGQDYLNTMAASIPLKRLGNVADIGNAALFFASDEAGYITGQSIIVDGGQIIPESLEAIEEI

>CBC21_02565_UniProt_A0A1Z8VK20
MRYLSSLANEALELWNLPEGSKARLINVSENETFLVETPTGLKSILRIHRENYHTETAISCEHAWSRALNAEGGVKTPDILPGKNGSTIQSATSEALGQKRYLAMFEFVEGSEPDQQDDLTGGFQELGEIAAKTHVHSIDWDRPEPFERLVWDLDTVFGQDATWGHWRDGPNIGTQTRQVLEQVETTVIERLTQYGRKPDRFGLIHADMRLANLLITDGETRLIDFDDCGLGWLMYDFAAGISFMEDDPRIPELKDAWVQGYRSIRPLSEEDETEIPTFIMMRRLALLAWIGSHSEVEIAKELAPTFAPISEELGRKYLASLS

>CBC21_02570_UniProt_A0A1Z8VK25
MSEAKLEFLDRSRAFWNPGKTQDWQDMGIDLVIDRREGYYLYDMDGHRLIDLHLNGGTYNLGHRNPELVQALKAGSERFDMGNHHFPALARTALAEALAACAPSPDMRYTAYGSGGGEAIDIALKTARHATQKRKIVSIIKAYHGHTGLAVKTGDDRFSKLFLSEDTEGEFVQVPFNDLNAMEDALRGRDVAAVIMETIPATYGFPMPHEGYLPGVKQLCERYDALYIADEVQTGLMRCGEIWACTKYGIEPDIMVTGKGIGGGIYPIACVLISERCGGWLKEDGFGHISTGGGAELGCIVAMKVLEMVQRPEVRTMVRYISDYMRAGLDQIMAAYPDFFIGIRQHGVVMGLEFNHEQGAKPVMKHLYDNGVWAIFSSLDPRVLQFKPGLLMTQADCEEVIRRVEIAVGLARDEVMGASHHSYRKSA

>CBC21_02575_UniProt_A0A1Z8VJW3
MEPQVRTLVDIADTPAALAGQADIVLERARWAAEVFRRFDQTLTMSIVDAVAKAAHENAGRYADWAVEETGFGVAAHKKIKNELTAHPLVDFYRDQDFVNPRIDEPRKMVEIPRPAGVILALTPSTNPIATINYKILIALMTRNAIVIXPHPAARECSVDAAHLLSKVAQEAGAPDGVIQIIEHPTIPLVEEFMRSKKTSVTLATGGNAMVRSAYSSSNPAIGVGPGNAPXXVXXTADIXXAAKRIIESKSFDNSALCTNESVLIALESIDKRLCQALRQNGAYICDADDVERLRRYLFHDRGFNVETVGRDAVWIAKECGIRVPENIKVLVAPIGQIGVEEPLSREKLCPVLAYHVVRTRSQAISQARAVLRIAGAGHSAAIHTSDETAAMEFAGAVEVYRVVVNAPCTQGAAGFATALAPTFTVGTGYFGRSSIGENIGPQHLVHWTRLAYNSSPXEAFGSYHGVSVNLAGPLPXAPADGVPGSSXSAVRXPXSXASTEGSTDPSRDELRKIIAEELRSILRH

>CBC21_02580_UniProt_A0A1Z8VK18
MSDLRSFIFLDQLQPQTLAYVASWMRGVXPRHNMAAQIIEVAPGLDIEGLTDVAXKGANVSVGLLVVXRQFGYLEFHSSATAEVKVGAQAVLDAIGAREEDASAPQILGSKVVTRVDHQHAFLINXNKLGSMILGGDSLYLLECQPASYAILACNEAEKXSNIKVVDYRMIGANGRVYLAGDEAEIRNARDAAESSLRNAGAV

>CBC21_02585_UniProt_A0A1Z8VK91
MSEALRQTIRELXREELHKIRRDKSEPDHPAERVKEETVAINTDQDLARFARRILAISADAAGRAAIDSGRHVFRLETRERASAPGHQNALPAAVGSTVIQIDKGVITEKQAMKFPEEVGTVRISKGVQLTPLANDVIRRAGKKIERLKQ

>CBC21_02590_UniProt_A0A1Z8VJW6
MIRGRVTGRVWSSRRIDTXPNGALLEVSLDGGGTLIALDPLGCNEGEAVLITQGSVAAAYFTKIKAPIDALIIGSIDEKS

>CBC21_02595_UniProt_A0A1Z8VKD2
MSNQAIGMIETRGYVPALASADAMVKAANVELVSKNEVGGGLVSVVIKGDVGAVKAATEAGAEAANQVGEVVAVHVIPRPHADLSGHFALTADA

>CBC21_02600_UniProt_A0A1Z8VJW2
MTELRVYLPIYDLQPQFAAYLSTPTRARGYPPFEGQHSLIIEVSPALAIHRISDLALKAAPDMEPGILFTERQFGLLELHSSDREELDAAGDAILRGIGASATDQLAPQVLFEDVIENLADQHAIILNRSRSASMLIPGQSLLLCEMTPALFACAAANEAERAAPGAVLNDVQMMGVSGRVFMSGDVEELRKAQAAIKETLXAVRGRSR

>CBC21_02605_UniProt_A0A1Z8VJW1
MSDWKNAFRSFYYETAEPPENPELKPSETALLVIDIQNTYLEVPDDPEEAARWTPFLERMNHQVIPGTAALVDQCRSHGFEIIYARIACLTEDGRDRSLSQKKPGFNYLLLPKDREDXQLVPELTPQGDEIVITKTTDSALTGSNLRLILHNIGIRNVVVAGIFTDQCVSSTVRSLADESFNTLIVEDCCAASTMALHNHELEVINMIYCHVVQSEDIAAFVTA

>CBC21_02610_UniProt_A0A1Z8VK35
MFTRRLDGLRSKMAKAAIDIAVITDDDSVYYYSGYYGYLHMDFGRPTIMVVVADGKTVLITPAMEKDLAESLAVVDHIALWNDGMGTEWREALPNLLGTTAAVGIEPDLISPLVRTFIDSVVDAXRYRDVSPIISEMRMVKSEEELKIARHAGEVGIAMMEAGRGAIKEGXAEYEVALAATTAGTHKAAELLRTHYEGSQMSPSIHFMQILASGQEITMTHHRASTKRLXYGEPVFLCFCGMTDFHRFKLGFDRTFWIGEIADRSQEAAYQTAVDSQAAALSVLRPGVLAEEVHAAYAEVIQSAGFEYPFRCGRATGFSFLECPXLVYGDKTVLEPGMVFAVDGSVTVPGKFRAQVGDSFIITEDGYEQITXHPKVXAQVIV

>CBC21_02615_UniProt_A0A1Z8VJX2
MSAIVILGAGHAAIQCAASLRDLGNTSPITIIGADTDLPYHRPPTSKKYVIEGVPXDFSLLRAADFYXTEKIDLLLDETVESVDPAGRKITLASERELDFGQLVMALGSEPXTLPIPGIEYALSLYSLXDARXVFKRLSSANSVAVIGGGFIGLEIAAAAAAAGKDVRVIEAAPQILGRSLTPALAQRIRSIHEDAGITITDSASVESVSXDGVLTGEGFIXADLVLCGAGSVPRIQVAEAAGLKTGNGIEVNQYLETSSPNIYAIGDVACFLSAYGDHRRYESVQNANDQARALAKTLSGEPTAYEAFPWFWSDQGSIKLQMAGDSRDASEISIIEGSQPPQVAVFCFDAENHLCAVETINWPAYHALSRKALSDGRIVSREQLAAVNFDLKTALKK

>CBC21_02620_UniProt_A0A1Z8VK30
MANEDPLRIGELTLGDYLRGTGMQAVVVGKSEGKFNAAAAMRFQVTEGSEQEQCLRNNGFTPYELFAGLYPDPILPADLGYSDYLRSHGFDGNNPWETWANSAVNEQGKIVSGWQMRNASLAARVPEEYSETAFVTDRAIEYLNGLQADEPWCMHLSYIKPHWPYLAPAPYHELYGAEDILPAVRSDQEKENAHPVYQAFMAQDYSENFSRDEVRQTVIPAYMGLIQQLDHHIGRVISTLEQKGLRQNTLIVLTSDHGDYLGDHWLGEKDLYHEPSIRIPLIISDPSPAADATRGLARNDLVESIDLVPTFVESAGGVVSPQRMEGRSLLPLLHDAMPTLPWREFAISEIDFGDRGPRHLLGVHPYDCRAWVVRTAKWKYVLHQKFRPQLFDLVDDPNEFHDLGHDPNCSRVREELHEMLFRWQRALKARTEIPMDDLMERGPRRDEEDFGILIGHW

>CBC21_02625_UniProt_A0A1Z8VJL2
MXDLLIKXGLVVDGTGXPGFMADVAVKDGKIVSVGKISENAKQVINAEGQIVSPGFVDGHTHMDAQIFWDPLGQCSCYHGVTTVMMGNCGFTLAPCAEKDADFVFRNLERAEDLPRDAMREGIKWQWETFREYLDVIEALPKGINYGTYIGHSALRTYAMGERAFSEAATADDLKCMQEEVQDAIRAGAIGFSTSRTMNHLTADDRPVASRVADWSEVCSIVNAMGEAGGGIFELASEEPGRNPQRRQDYFDRLKALAIESKCPITYGMPSIRIAPELWPAFYDLGSEVEAAGGKLFVQAHSRSISTMLSFLSKTPFDAWDVWRDVRARPIAEQKKLLRDPEVRRKLIEVASKPHDGPKAAGAEARPPEWDWVYLFNGVGDERL

>CBC21_02630_UniProt_A0A1Z8VJM3
MPQYHIIDVDTHVTERGDLWTSRVPERMRDKVPYVAKNKRGRVMWXIGDTAIARLGFNATAGVGDMMNPPNDYDDMHPGAWXAHERLKYMDQYGIWAMVMYPNVGGFGNQAFLKLKDPELMLTCVQVYNDWQTEWASADPRRLXAXTSLPFWDIDQSVAEVYRCAKKGHKGILFTGDPQSHGQPFLGDPHWDPLWQAACECDLPISFHIGSGNMEGGLVREKSEVVGKMAAFTELSVEFFMRNGVQLTDLLLSGVLAKFPSIKFVSVESGIGWIPFVLEALDYQFEGNSVRKQRPDLAMPPSEYFKKNVXGCYWFEQVAPKKLXDAVGVDNILFETDFPHPTSLFGDEIQSRISEGLGDCDPEIKEKILWSNAAELYKVDLPPEQ

>CBC21_02635_UniProt_A0A1Z8VK59
MRLLLNKFICFILLSAGSGANAYELDSNLLAEFKPLKESDWSYEKAAHLLERAGFGGTPSQIYKLLEVSPEEAVDSLVNPKRTNSHLLKFEHSGIFDPGLEPFPASRPATTKLANETGQALGIKVRPNGNRPLQPIVNKFFYWLRASRLETDRVAQWWGERMVFTDTPLTEKMALFWHGHFATNEDKVRDYRKMLKQLQLFQTEGLGSFRTLMVAVAKDPAMLAFLDAGVNIKESPNENFAREIVELFTMGVGHYTEQDVREAARAFTGWNYRGLDFVLNRDQHDYGSKTFLGHTGNLSGEEVIEIILEQQVSAEFIASKIYAFFVSENIDPKLRKALGQQLQDLNYEIRPFLKLLFLSXNFYSTKVVGTRIKSPTELVVSTYRKLGLDKFPGAPDFNHVTGSLGQRLMHPPTVAGWSYGKAWITPSLLIQRGNFAYNLMFPDIEFIPWDKYPGEIQYRIINVHQKIRDGASITEATKPTSDYSEVAALSNQTDRNEEFNTRFGSYRGWQMAIERVLPIERDLPQISLTNMIVSEKLNTKEQVVDYLVRRFISVPLGEHTRITLGQLLLKEVGDDDLSQHTNSLEMPLRTLLHAILSLPEYQLG

>CBC21_02640_UniProt_A0A1Z8VJT5
MKRRQLLKGXVAATLSAGLNPLTKLSAVTNQPRILVVFELSGGNDGLNTIIPYRNDDYYRARPNIGLRPNEILKLDDEWGMNLGLAGLKQQWDKGNVAVIHGCGYERPSYSHFTSMAYWHTASPNSGDAYGWCGKTADFLAPDAPENFIINIDTSQSLAVTSRYHTPVVFDDPDLFRRINPNGVMTIPPNGPTGHPRTETTRTFLSSVAASAKSASRKVREACASYQTPVDYGIAPSQLDQVAACIAAGFETQIYYLAFRNNAFDTHVHQKDLHQRLLMYAGDAINGFLEDMERIGMAEHVTLMMFSEFGRRVGENANLGTDHGTANTMFMAGKPVIGGHYGKPPILGTLDETDNLIHTTDFRRVYATAIESWLGSSNSIDILKGNFKPFPIFS

>CBC21_02645_UniProt_A0A1Z8VJT1
MSLIVLDPTGELEPSFRQPLGKPNSLEGLTLGLLDISKAKGDVFLDRLETLFTEKGVAVRRYKKPTFARPAPTELLQEIATNVDVVIEGLAD

>CBC21_02650_UniProt_A0A1Z8VJN0
MQFDDGIIAVVKKDCPTCILIEPVLKDIEDRGLHITIFFQDESDFLSTSKNIDDTSLEASYFLNIETVPSLIKIEKGEETTRVVGWERVEWQEFFEEQGLGMGLPDWKPGCGSLSVEEGVPERLAVKFGGVDFYSRKLKIPSLVDDIEYCYEQGWTDGLPVIPPTEERVLKMLNASPRLPNEIMGSVPPHSVNCPVVKVAINAVMAGCKPEYFPIVLAAVEAALDDRFCLGGLLATTWFSGPMVVVNGPIREAVDMNWSGNLLGQGNRANATIGRALQLVVRNVGGGHPKGTDQSTFGTPVKYGLCFAEDEETPWTTLAEDQGIARDRSAVTVFSADGPLGCVDQNSRAPEGVVESLAGSLRSINHVEMANASDAVILIGPEHGRVFDLAGWSKADTVSALHENLFIDGADLGMTSDDEVIEDLTQSKNKIPKFREEGLQLIRAGGDAGLFSAIIPGWLMKGELGTDPVTKEI

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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