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BMC type: RMM1


Organism: Mycobacterium chubuense (strain NBB4). Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

   Mycch_4880 (fasta)
           Mycch_4881 (fasta)
                Mycch_4882 (fasta)
                        Mycch_4883 (fasta)
                                   Mycch_4884 (fasta) HMM08841dhact_1_pdu RMM1 (HMM details)
                                     Mycch_4885 (fasta) HMMpropdeh2_1_pdu RMM1 (HMM details)
                                                   Mycch_4886 (fasta) HMMpropdeh1_1_pdu RMM1 (HMM details)
                                                             Mycch_4887 (fasta) HMM13520tp_2_rmm1 RMM1 (HMM details)
                                                                     Mycch_4888 (fasta) HMM00202amintr_1_rmm RMM1 (HMM details)
                                                                               Mycch_4889 (fasta) HMMalddh_2_egra RMM1 (HMM details)
                                                                                  Mycch_4890 (fasta) Tdp_mustard RMM1 (HMM details)
                                                                                     Mycch_4891 (fasta) HMMnopfamrmm1_2_rmm1 RMM1 (HMM details)
                                                                                      Mycch_4892 (fasta) P_cobaltBlue RMM1 (HMM details)
                                                                                       Mycch_4893 (fasta) H_darkIndigo RMM1 (HMM details)
                                                                                           Mycch_4894 (fasta) Tdp_butter RMM1 (HMM details)
                                                                                                 Mycch_4895 (fasta) HMM01636transf_1_rmm RMM1 (HMM details)
                                                                                                      Mycch_4896 (fasta) HMMnopfamclust3_1 RMM1 (HMM details)
                                                                                                           Mycch_4897 (fasta) HMMreg00392_1_rmm1 RMM1 (HMM details)
                                                                                                                Mycch_4898 (fasta)
                                                                                                                         Mycch_4899 (fasta)
                                                                                                                              Mycch_4900 (fasta)
                                                                                                                                      Mycch_4901 (fasta)
                                                                                                                                            Mycch_4902 (fasta)
                                                                                                                                                  Mycch_4903 (fasta)
                                                                                                                                                                Mycch_4904 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_darkIndigo

BMC-P(map on tree)

       P_cobaltBlue

BMC-Tdp(map on tree)

       Tdp_mustard
       Tdp_butter

(complete list of loci)

Protein sequences:

>Mycch_4880_UniProt_I4BQL6
MLGKLARASTRAWIPLLLVVVVALGAYAVLRVRGDIGGHELSGGTEAGAGGFTDPFNPKHITYEISSSSSNGPVSVDYLDENGQPHHVDGQLPWSFTIVTTLPSMSANIVAQAGTGASDLRCRVVVDGQVRDDRSTDEYHPFIYCLVKSV

>Mycch_4881_UniProt_I4BQL7
MAAMKLPVMPPVSPMLAKPVAEMPPDASYEPKWDGFRSILFRDGDDVELGSRNERPMTRYFPELVDAARTELPPRCVIDGEIVIATPEGLDFEALQLRLHPAASRVRLLAGQTPASFIAFDLLALDDCDYTSRPFGERRAALVETLAGSGPTIHVTPATTDIRIARRWFSEFEGAGLDGIIAKPLNLTYQPDKRVMFKVKHQRTADCVVAGYRLHKSGDDAIGSLLLGLYTDGGALASVGVIGAFPMATRRALFTELQPLVTTFDDHPWNWAAQAAADPALARRYGVGSRWNAGKDLSFVPLRPERVVEVRYDHMEGKRFRHTAQFNRWRPDRDPRSCTYAQLEQPLTFRLDDIVPGLGRP

>Mycch_4882_UniProt_I4BQL8
MDLGIHVPIFDIDGGTTAIAGELARVGSAVEESGATWLSFMDHFFQIEPTGLPAESHMLEGYTTLGFLAAHTSTVSLGLLVTGVTYRHPGLLAKTVTTLDVLSGGRAVLGIGAAWFEREHRGLGVPFPPIAERFERLEETLQICDQMWDPDNNGSFDGTHYHLEETLCSPQPINRPKVMIGGGGERKTLRLVAQYGDACNLFASSPDDVAHKLEVLRRHCDVAGRDYGTIRKTVMVNNPRPTPETRDEFVRAMADYAAIGVDTVIVTPTTGSPAAWIEGMTPAVKQLAELG

>Mycch_4883_UniProt_I4BQL9
MGSFVTGAAARERFSTLLDQVDAAYAEMTDLPCDTVGSRFRMEMAERLETQERRNRALMYRTFGQIADPPDEAAMAPMVKPRLAARLRIPVREVTRRFKTAAKVCARRQLSGPALPPLLPVVADALAAGTLGEDHLRAITTTMDKLPSATSAVDREDVEATLVRESAKQDADFVKEVGKRLDEVFNPDGHYDEADRARRRGLHLGAQGPDGMSKLWGWVDPENRAYIEACSAAVRPGRHLPDGSIENTPDDRTPSQRCHDGVKLGLKTALSSGQMGSHRGHPVTVIARTTLAELNQAAHAATNPDVSMPAPARTGGNTALPMRDLIRMATDAIHYLAVFDDHSDRPLYLGRQTRIATTDQRIICYSRDGGCTRPGCLEPGYHSEVHHSTDWARGGRTDADVLYFACGPDHKLLTDGHWTAAVTERGRLAWTDGTSSPGVNRAHQPDELLRGDPDG

>Mycch_4884_UniProt_I4BQM0
MVAGIDVGNHTTEIVLARVRSGVVFTIAHGQAPTRGRKGSVESLQAAAALLHRIEVDAGVRADELLLSSLRPVDTATAPIPPGYSPSSPVRSLRRPDASTPAGAGYGVGSHVRLADLTASAAGGPVVVSVDDATDFEVAAREISAAVDRGWHIVGVLAAQDDAVLIRNRIPIDVPVVDEADVADLEPGALVAVEVVEEGRAYRAMADPIALSAALGLPADSLVDVAEFCRELADSAAIAVTRRTSPPPPPAPDDDYVEIGVNGETSRFSPAQAHAVLRRSVPGCVRQVRLRSVPTAVDGLAVHDAFFTDLASIDNGAWLRRGVADAQGTVVALLAAEEAADAAATLEELTGRRATTLATEPEAAAWGARTTPGIPPGAVVCDIGGGTVDLIGTERTVVAAGAGESITVAVARVLGIPRALAEAVKRTPAVRVEGPHVAHEEDGRRVFLDSPASHDAIGRLCTRGSAGLVPFSNRLAAEEWRSLRLAIKQETVAANIARCLAAFDEPPTALVLAGGGALDDELMRTVGEALRGVPVVVGRANIDGVHGPRFAVAAGLTAMYAKQ

>Mycch_4885_UniProt_I4BQM1
MSDRDVTIGNAVDGKLGLADLRMDPAALAHQAVVAEEGGNPQLAENFLRAAELATIDDEDVMALYEALRPYRSTAAELEELRASLVARGASRCAALVEQAAAAYTRRGLLR

>Mycch_4886_UniProt_I4BQM2
MADELGRFRVLNSKPVNLDGFSVADPGLGLVAMHSSHDPSPSLVVQWGDGGPYVTELDGKGAAEFDVIDEFIARYGIDLAVAEEAMALDDAALARMAVDVNVPRAEVVRLIGGTTPAKLARVVALMSPVEMQMAMAKMRARRTPSNQAHVTNQLDDPLLIAADAASAVAYGFREVETTVPVLGDAPSNAVALLIGSQVGTPGAMAQCSIEEALELRLGLRGLTSYAETISIYGTEQVFVDGDDTPFSKAILTSAYASRGLKMRVTSGGGAEVLMGAAEKCSILYLESRCVSLARALGSQGVQNGGIDGVGVVASVPEGMKELLAENLMVMMRDLESCAGNDNLISESDIRRSAHTLPVLLAGADFIFSGFGSIPRYDNAFALSNFNSDDMDDFLVLQRDWGADGGLRTVSPERLEAVRRRAATAVQAVYRDLGLADYDDSRVEEVVSANGSRDLPAGHPKMVAEAAASIEARQLTVFDVIASLHRTGYVEEAEAITTLTRERLRGDQLQTSAIFDDQFRVLSKLTDPNDYAGPATGYALTEQRRAEIDAIRQARSSAELTADQVEHRGHVVVTDIEEARQGSDPREVCIGLSPAWGDTVWLSLCGLTIGEVLRQISAGLEEEGCVARTVRVRSTIDVGLIGLTAARLSGSGIGIGLQGKGTALIHRRDLAPLANLELFSVAPLLTARMYRELGKNAARHAKGMAPVPIFTGGTDESISARYHARAVALVALEREASEPGKPPMTVKVEYP

>Mycch_4887_UniProt_I4BQM3
MTDDPTTLAPGQQKSTDSVQRLKRNAVGTFGVIFMAVATAAPITAMVGNVPIAVGFGNGAHAPAGYLVATIVLGLFAIGYATMAKHITSTGAFYGYISHGLGRVIGMASGLIITMAYVVFEGSLIGIFAFFFQNLFDSQLGIHVHWLIPALLMLTLNCILTYFDVNLTAKVLGVFLITEIVMLSLGAIAVAVKGGGPDGFAVGQILNPVGAFQPAAIAGASAGLGLFFAFWSWVGFESTAMYGEESKDPKKIIPRATMIAVLGVGIFYVLVSWMAIAGTGPKQAVDLAQSADTSSEIFFGPVRSTYGEWAITLFNILLVTGSFACGMAFHNCASRYLYAMGREGLHAGLQKTLGATHKHHGSPHIASFVQTGITLVLILAFFFAGMDPYIHMYTLLAILGTMAILIVQSLCAFSVVAYFHFHKNHPSSAHWFKTFLAPLLGGIGMLYVVYLLWEHKDAAAGAASGTLLFKLTPWIVVGVFAFGALLALYFKFRDKDRYELIGRIVYEDNEIRD

>Mycch_4888_UniProt_I4BQM4
MYDYGTFSFDSKAQVLERAKEYWNPDKTQFWTDSGVDLVIDRRQDYFLWDMSGRRLIDMHLNGGTYNLGHRNPELVQAITEGMQYFDVGNHHFPSVARTALAQKLVESAPASLTKVAFGSGGGEAIDIALKSARHAMQRRKIVSIVKAYHGHTGLAVATGDDRFAKLFLADRPDEFVQVPFGDVDAMEQALRGRDVAAVIMETIPATYGFPLPPIGYLEAVKDLCERYDALYIADEVQTGLMRTGEMWAITKHGIEPDIMVTGKGLSGGMYPITAALLSDRAAKWLEQDGFGHISTFGGAELGCVAAIKTLEITSRPEVRSSVHYIAEIFSEGLTRIQADYPDWFVGIRQNGVVIGLEFDHPEGAKFVMRELYQNGVWAIFSTLDPRVLQFKPGLLLGRELCEDVLDRVEVAVGRAQQAATGRRKP

>Mycch_4889_UniProt_I4BQM5
MTGENLVPHAGQLLERAHFAAAAFSDYDQASVARIVEAVAEAGHRNAERFAAAAVAETQMGVVDHKIVKNRACSRGIVDFYRDQDYVSPRIDSARKIVEIPRPAGVVLALTPTTNPVSTVYFKVILAMMTRNAVVVAPHPRAKQCSADAARVLAEAAATAGAPDGIIQVIDEPSIPLVEALMADERTDVIVATGGTGVVRAAYSSGNPALGVGPGNVPVLVDATADVEAAARRIVDSKAFDNSVLCTNESVLIVEEAVAARLRSALTRHGAHILDEDAALRLREFMFPGGALNTEVVGRDASWIAERIGLRVTPKTRVLIAPFTDVIGEEVLTHEKLSPVLGMTTVADARRGIRAARAVVRIAGAGHSAAIHSEDPATITDFAAQVPVLRVAVNVGNSTGSSGLDTNLAPSMTIGTGFVGRSSIGENLQPDNLINWTRIAYNSDAGVPMANFAGLSPWRSPAGPVPAYPRASNDTAAAPAPAVRTVSRAPARRNGDPGIEALRAELRALVAEELAQLIKR

>Mycch_4890_UniProt_I4BQM6
MAELRSFIFIDRLQPQTMSYLGTWIKGALPRAGVAAQIIEVAPGLDIEGVTDVALKHAEVQAGVLVVERQFGYLEFHGETAAVEAAADAALDELGRESDSATAPQILASRIISSIDAQHAFLINRNKIGSMVLAGETLYVLEVSPASYAILATNEAEKAADIKVVDFRMIGATGRVYLSGTESDIRQAAAAAEESLARSVP

>Mycch_4891_UniProt_I4BQM7
MSIDREELRRLVRDVIRETVGDLKAAPAPAPAPPKASPPAPARAPEGPVATGPLAADERSRTDTVRIANDRDLDVFVRNLLRLFENPKTRADLRHGRLTFRLAGAERGGSGSSRRVERGAVTERQIADIAEAGSSLILGPRAVLTPLARERARALGVTIHKERT

>Mycch_4892_UniProt_I4BQM8
MIRGTVTGQVWSTRRIDGIPAGAFLEVQTESSQLIAFDVLGTGVGEQVLVAQGSVAASWFTGTPPPVDALIIGSIDPAG

>Mycch_4893_UniProt_I4BQM9
MASNAIGMIETKGFVAALAAADAMVKAANVTITDRQQVGDGLVAVIVTGEVGAVKAATEAGAESASQVGELVSVHVIPRPHSELGAHFAVNGQ

>Mycch_4894_UniProt_I4BQN0
MAVLNTPKGNEAPTRTDIRVYLLVEDLQQQFAAYLGTPTRARGYPPYAGEHALIVEVSPALAIERVIDLALREVPGIQPGILYVERQFGVLEIHSGDLADVRRAGEAILNGTGNVAADQLRPRVLYHDVIEDITDQHAVILNRNRQASMVLPGQSLLVYEMTPALFAAVAANEAERAAPGLTLVDVQMIGAAGRLYISGSTEDVVTARDRITAVLAAIEGRDH

>Mycch_4895_UniProt_I4BQN1
MGDDRAVAEQALEAFDLPQGSALRLLNLSENATYAVEEPGTGHRSILRVHRKDYHRRDQIESELHWLDALRRDSDLTVPTVIPARDGGRVVTVTHDGTERHVVHFEMVPGAEPDENSLTTTDFHTLGCITAALHDHARSWRRPAEFSRFAWDWEHSLGDSPRWGRWRDAVGVGPAEEEVLTRAQELLQQRLSEYGSGPDTFGLVHADLRLANLLVDGDTITVIDFDDCGFGWYFYDFGTAVSFFEDHPSVPEWQEAWVSGYRTRRELTPADEDMLASFVLLRRLLLLAWMGTHSHSRESQAISITYAAGSCELAERYLSSDGHRLT

>Mycch_4896_UniProt_I4BQN2
MFTSLQGRSAIVTGGSKGIGRGIAETFARAGVNVVLTGRHQADIDATVSDLDGLGGSVTGVAADVTSPEDCRRVVGTAVERNGGLDIVCANAGIFPSGRLADLTPEDIEQVIGVNFKGTVYIVQAALEPLTASGHGRVIITSSITGPITGFPGWSHYGASKAAQLGFLRTAAIELAPKKITVNAVLPGNIVTEGLIEMGQAYMDQMAAAVPAGRLGAVADIGNAALFFATDEAAYVTGQSLVVDGGQILPESPEALADL

>Mycch_4897_UniProt_I4BQN3
MATQTEELRRLIVADINAGEPGTKLGSERELAERYRTSRSSLRQVLAALEESGLVDRVIGRSGGIFISHGQVQRSLSDVVGVPAFLASQGYVAGTRVLSTKIAAPDATTQQALGIAAEDFVIEIQRVRLADGSPISLELARFPAETFPGLLEQQLGGSLYEILESHYGLVTSRADERIEAVNATPEEATLLGIKPGSALLLITRITYDQNGTPCEYSRDLFRGDRTRLAVTARGRGVGAQPSVGDASVALQSQQRRVG

>Mycch_4898_UniProt_I4BQN4
MTSPPGAGRFAPSPSADLHIGNLRTAVLAWLFARSTGRRFLMRVEDLDDRTHPEVAERQLADLAALGLTWDGPATRQSDHPQRYDDVVDALADRGLLYECFCTRRDIAQAPRAPHAPEGAYPGTCRNLTDAQRAQRRDETGRPPALRLRTDTAQFTVHDLLHGDYTGVVDDFVVRRGDGVPAYNLAVVVDDAASGVDQVVRGDDLLSSSPRQSYLAHLLGHRQPVYAHVPLVLNADGARLAKRDGAVTLAEIGVPEALGRIAGSLGYRAHTVAGMLAEFDPARLPRTPWVYLPE

>Mycch_4899_UniProt_I4BQN5
MGYPRRRRAGLVTILLLAAALLSACGPSADRSENPIKSAGVLRVGTEGVYSPFSYHDAATGRLVGYDVEVARAVADKIGVNVEFVETPWDAMFAALEANRFDVVANEVTINPQRRAKYDLSEPYSVGEGVIVTRAADNSITSLADLKGKVAAENATSNWSDVARKAGARVETVEGFTQAITLLNQGRVDVVVNDSIAVYAYLAETKDTSVKIAGSVGEKSEQGFAARKNSGLLPELNKALDELRADGTLARISQKYLNANASGAPEAAGAPPVRSAWQLILDNLWPLAKAALTMTIPLTIVSFVIGLAIALVVALARLSANVVVANVARFYISVIRGTPLLVQLFIVFFALPEFGVKIDPFPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAASTIGLNYVGTLRRIILPQAARVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIIAAPTFEFFALYGTAAVYYWVICLVLSFGQARVERRLERYVAK

>Mycch_4900_UniProt_I4BQN6
MTEPTEPTEYRVTAAGVRKAFGDNQVLKGVSFTVPRGSATTIIGPSGSGKTTLLRALNALDPPDAGVIRIGGPQDGVEVDFSKPVSKEWLRRYRAQSGFVFQSHNLFPHKTVLQNITEGPIVAQKRPREEAEAEAVELLDQVGLADKRDQYPFQLSGGQQQRVGIARALALRPKVVLFDEPTSALDPELVGEVLAVIRDLAVEGWTLVIVTHEIQFARAVSDQVLFTDGGVILEQGPPAEVIGDPKEERTRQFLQRILNPL

>Mycch_4901_UniProt_I4BQN7
MAHPPAVAADVIVVGAGISGLIAARTVLAAGLTPVILEADSRVGGRILTEEAAPGLPVELGAQWIGDTHHRMFALAEELGVQTYPQFDEGETSYELAGSGVLRENEFRARFAGELGELEKVLRLLDELAAEVPPEAPWRAPRAADWDAITAGAWYDGQALSPVARTLLEICTVGILAVPTVEVSFLHLLFTIQTCGVTSELFAESEGGAQTTRFVGGTGEIPKRLAALVTDHLVLDAPVQLIEHSDDSVTVHCRGGRTARGRRVIVAISPALAGRIMYDPPLPGKRDQLTQRMPNASAMKAFFVYDEPFWRAAGLNGQLISDVGPARMSNDTCLPGDDHGVILCFLEGEQARTYGRMPTEERRAALTAELVRHYGDKAARPAAYLDGEWADRQWTRGCYNANLGPLVWTNFGDALAEPIGTIHWASTDTAVRWSAYMEGAVEAGERAAQEVIDALTG

>Mycch_4902_UniProt_I4BQN8
MSPRTSLVMGASGFLGSHVTRQLVARGDDVRVMLRRTSSTRGIDDLDVERRYGDIFDDEAVRCAMAGREVVFYCVVDTRAMLPDPAPLFDTNVEGLRRVLNYAVDAGLQKFVYLSTIATMALSSDGRPVTEEAPFNWSRICGRYVQSRLTAEELVLDAEQRRGLPAVVMNVSNTYGPRDWQPTPHGAVVARAASGTMRFYARGAAAEVVGVEDAAHAMLLAAEHGRPGERYIISESYMQLRDILRAAADETGVRPPAVAVPMTMLYAGAYAGLPLRRLLPTRIAPLLDVVRLLDLTSPADHSKAARELGWRPAPTSQAIRRAARFYAEHRPHLG

>Mycch_4903_UniProt_I4BQN9
MSTRSLLLTGATSGLGLGVARRVVGRPGWQSVLLVRNAQRGAVLRELLGDRFTEGFDQIVNCEQSSLDSVRGAAAHVGELIDEGRVAPLSTIVLNAAVLRNDATELSVDGIELTVATNLFGPHTLLARLSPRLAADARILIVGSPTIRQTWFQRAAGVKAASWKPLREQCAPSQDGVAAYARTKLGLFYLSCAAARLAPAEMGAAYFDPGVMPGTNILRERHRASQIYWLKVLPYIAWTFGGVTVGRGSRVMAPYVLHEKPMGDRAFLSVKRGKRPPPVEVARVREYFTGANEICCVEPGDAAPWWHRPEALCG

>Mycch_4904_UniProt_I4BQP0
MLDLISRLAIVAPKRVIAVAIALMALAGVLAAPVGSMLSAGGFTDPDAQSNQANRVLTEEFHRGFVNLNLLVTASEPVSSPSVRSALDRLVAELRSSEHVARVLSPTETADPVGAGLVSKDGKSALVIAYLDGDESTGIADSTALVERFVGQREPGLTIAAGGPGAVYGQVNEQARKDLTLSEAIVLPLTFLVLIWVFGGLFAAMVPLAVGAFAISGSVAILRVVAEFAEVSVFALNLAVAMGLALAVDYSLLLVSRYREEIGDGSDPDEALRRTMRTAGRTVVFSAVTVALCLATMAVFPMYFLRSFAYAAVSVVMLAALAALVITPAAIRVTGDRIGKPGKHKPLTESRWYRWAQTVMRRPWLAVAFTVVPLIVVGLPFLDVEFGFPDDRILPTSSPARQVGDQTREDFTQDAGLPVHIVLSHGDGFGGAGDVDAYAAELSKVPSVVVAVGPDATYAAGRAVGPAAGESATAADHSFLTVTSTTEPFSAESDRLLDRLHAIPPPEGTTALFTGAAQSNRDGVESISSRLPALLGLIAVVMYVLLFLLTGSLVIPLKALILNALSLTATFGALVWIFQEGHLGGLGTTVVGTLVSTIPVLMFCVAFGLSMDYEVFIIARTREFWLASDRSDGANRRAVALGLAGTGRIVTAAALVMAITFAGLTASQVSMLRIFGFGLAVAILVDAVIIRSVLLPAVMVLLGRWNWWAPRVLGRMHDRVSVNEGSAHRDPVVSGERT

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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