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BMC type: PVMlike


Organism: Desulfotomaculum guttoideum. Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

      SAMN05443270_4508 (fasta)
               SAMN05443270_4509 (fasta)
                          SAMN05443270_4510 (fasta)
                                 SAMN05443270_4511 (fasta)
                                          SAMN05443270_4512 (fasta)
                                                  SAMN05443270_4513 (fasta)
                                                       SAMN05443270_4514 (fasta) HMMreg00455_1_GRM5 PVMlike (HMM details)
                                                              SAMN05443270_4515 (fasta) HMMaldol_2_pvm1 PVMlike (HMM details)
                                                                        SAMN05443270_4516 (fasta) HMMalddh_1_eutpdugrm PVMlike (HMM details)
                                                                          SAMN05443270_4517 (fasta) H_mint PVMlike (HMM details)
                                                                            SAMN05443270_4518 (fasta) H_cyan PVMlike (HMM details)
                                                                              SAMN05443270_4519 (fasta) H_evergreen PVMlike (HMM details)
                                                                                SAMN05443270_4520 (fasta) H_cyan PVMlike (HMM details)
                                                                                    SAMN05443270_4521 (fasta) HMMptac_3_eut2 PVMlike (HMM details)
                                                                                     SAMN05443270_4522 (fasta) P_ocean PVMlike (HMM details)
                                                                                             SAMN05443270_4523 (fasta)
                                                                                                      SAMN05443270_4524 (fasta)
                                                                                                           SAMN05443270_4525 (fasta)
                                                                                                                SAMN05443270_4526 (fasta)
                                                                                                                        SAMN05443270_4527 (fasta) HMM00465alcdh_3_mix PVMlike (HMM details)
                                                                                                                               SAMN05443270_4528 (fasta)
                                                                                                                                   SAMN05443270_4529 (fasta)
                                                                                                                                                SAMN05443270_4530 (fasta)
                                                                                                                                                          SAMN05443270_4531 (fasta)
                                                                                                                                                                SAMN05443270_4532 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_evergreen
      2x H_cyan
       H_mint

BMC-P(map on tree)

       P_ocean

(complete list of loci)

Protein sequences:

>SAMN05443270_4508_UniProt_A0A1I0KTL9
MKCAVSDFDRTLYIDGCISAKNLNAIGDWQAAGNRFVIATGRNESSVRVFLEKYSIKPDALILNNGALLLDETGKELFCRTIDDQTAREVLWYLHGLGEEGSGVSMRNGKVNVLSSSGATTQKPCDGQVSIDQIHSLEEIIQVHRRRQDVQWIRTLCARLNERFPLISAYANVWNGDIVAKGVNKSAAVEWISRYWGGFDEIRTIGDSFNDLQMIKDYGGATLQSGDPEVQAAASLIVEDVAEYLSMP

>SAMN05443270_4509_UniProt_A0A1I0KRS4
MKKRLAMVLAAAMVLSTTACGSSGTAATAAPASTEAKTEAAKTEPATTAEKVENAQSTGSLAGKKIAVVRNLAAGDHTQQFLDGCVSEGKKFGWTVDTFVTDGDDAKAQETVAQVIAKDYQGIIVSHGQLSYSYDMLKPARDKGMEVVTFDTMPYKGGDASGELLSGVTSTAQNDQALAELSLGYMMKEFEAKGGKYPMKVLKTFMGPGIPPLDRRNEIYTKLEAEGKIQTLEVIAPSDSANARGDMTNKTAAILPKYPEGSVDAIWGCYDELAKGVLQALNDAGRTDIPMYTIDVSNDDIQLMVKNPDVWKSTAAVDPKLIGIVDARLLALKFMGEETPDYFNLNACNIETTQLNAQTTMSDLSSIIDGWGDAEDPKGALYTDTIKNKYVN

>SAMN05443270_4510_UniProt_A0A1I0KRA5
MTEVKLEMKDISIEFPGVKALDGVDFGLKSGTIHALVGANGAGKSTLMKVLAGVNTHYTGQIYVGGEPVEIRCPKDAKNLGIEIVFQEVDTALIPYLTVAENVMFNTLVNKMGRKQIVHWKEIRQAAETVLKKLNVDVDINKKVSGLTLAQKQMVLIARCVAEKCRFLILDEPTAPLSNSETLELFRVVRELAKENVGVVFISHRLSELYEICENITIMRDGKLVTELPLSRELEVNTLVEYMLGRSYEDNYIKKKCEIGGPLLEIENLSEREGKVKDINMTVCKGEIIGVAGLVGAGKTELCKTLFSAYQQSGGTMKLNGKVIKAKGPTQAVKHGLALVPEERRKEGVLISDPVVSNISVAAMEKYTNRLSVVNKKREKVDAKNMIRDLGIKTPSENQVVALLSGGNQQKVVVGKWLNKDSEVYIFDEPTKGIDVGAKQDMYELIEGLAARGKGIIYATCEFQEILSICDRIYVMYDGEIIKELNAADTNEKELLYYSTGGK

>SAMN05443270_4511_UniProt_A0A1I0KRC8
MSGAEKVKKKRNVGDFVTKWGTIATMLIMFILFTFGNWSKDTGASMFLTQSNMITILRAVSITTIIAIGLTFALAVNGMDLSIGATAQFANVFVMTCFVWHNINIGVSIILTVLICLSVAVINSILIVKFKIPDMVAALSVMFMYQGVSMTYSKGGAITERMTRADGTQAPGLVPEAFRALGKEPWLIIIMICVVLFAYFFLNYTKHGRYMYAVGGNPEAAQLSGIPVAKYKILAYFLSAIFASIGGICLAARVGTAQISAGDSYLMPSVCAAYIGFSVLGAGKANAFGTFAGAVLVGMLENGLIMMSVPYYAMNIIKGAVLAIALAMTYASGKTKNVN

>SAMN05443270_4512_UniProt_A0A1I0KSC8
MSKYDSYFLMKAEEVPDYVKEKLTYFDADARLECKEIGDGNLNYVFRVKDPASGKTIIVKQAGEALRISAEMHVSTDRGRIEAKILGIQDSYAPGLVPKVYLYDGTMCAMVMEDMIGHTMMRTGLLKHETYPKFADHVTTFMVNSLLRTTDVVLGHKEKKELVKSFINPDLCEISEDLVYSEPFIDYNHRNNVFPPNAEFVKKELYEDQALHLEAAKLKFEFMNNAQSLIHGDLHTGSVFINKEHTYIFDPEFAFFGPMGYDIGNVIANMFFAWCNGDATIEDEKEKEEFCGWCLSTISDIVDLFIEKYNKVFDEHVTETMAKVPGFKEWYLEGILSDTAGVAGLESIRRTVGMANVIDITTIPDEEKRARAEKIVISLAKNYIMNRRSFRSGADYLNAIKEAIGKFESR

>SAMN05443270_4513_UniProt_A0A1I0KRB7
MSEETKKSIMDYDTVALDDENNALVIIDQTQLPYHTEILSLTKQEDIWNAIYLLQVRGAPAIGVAAAIGIYMAAREIKADGFDDFYAEFQKAKDYLDSARPTAVNLSWALKRMEQVVLKNKEKTVPEIVEILHKEAIEIREEDIWVCKMIGEYGLSLVKPGDGLLTHCNAGQLATVKYGTATAPMYLGHEKGYNFRIFSDETRPLLQGARLTSFELKESGLDVTVICDNMSATVMRNGWVDAVFVGCDRVAANGDTANKIGTSMVALAAKRYGVPMYICAPTSTIDMNTLTGKEIHIEERPAEEVVEMWYKKRMAPEGVKVFNPAFDVTDNDLIAGIVTEYGIARAPYTESLKEIFRKKEEALKAKEM

>SAMN05443270_4514_UniProt_A0A1I0KRD6
MLAVTRKAKIKDIILEKKSVTVTELSKIFSVTEETIRRDLKQLEDDGFLTRTYGGAFIQDGVENNVELTIRETAYMESKQAIAKKCLSVIHNGDSIFLDASTTSLQLAKALQGMRLTVVTNSLLIINELYDKEDIRLISIGGSYTPRDKAFVGNTAIRNLESFYLDKTFMSCRSVSIEHGITDSNEAIAAIRQTLMTRSNHVYLIADHSKFDKTSFIRISGFETIKGLVTDKQMNEQWREYLLKNNVELLEATEA

>SAMN05443270_4515_UniProt_A0A1I0KSD6
MMTVQGVKYMSDFEAKKAILDIGRRMYEKGFVASNDGNISCKVGPNTIWTTPTGVSKGFMTQDMLVKMDLNGKVLMGRWKPSSEVKMHLRVYKENPDVQAVTHAHPLVATSFAIAGISLDAAILTEAVLGLGSIPVAKYATPGTEEVPDSIAPFVKSHNGVLLANHGALTWGKDIHQAFYRLESIEYYATILMYTGNIIGRQNLLSCDQVDKLLDIRHKLGITAGGIPPCSVEVTNMKDVVTAADVRPAEQTGTGPVLKGVTSIVRPGESLPVSGCGCTGVTQKSLTLEEQKPVEAEALGKAKKEIIAEVVRRVIEQLN

>SAMN05443270_4516_UniProt_A0A1I0KTP0
MEIGAKEIELIVKEVLAGIESRGVKPSYFSSQSENGVFEQVEDAIAAAHTAQREWVEHYRIEDRRRIIEAIRITAKSHAKTLAKMVWEETGMGRFEDKIQKHMAVIEKTPGVECLTTDAISGDEGLMIEECAPFGVIGAITPSTNPTETLINNTISMIAGGNSVVFNVHPGAKRCCAHCLELLHQTIVENGGPANLITMQKEPTMEAVSKMTADPRIRLMVGTGGMPMVNALLRSGKKTIGAGAGNPPVIVDDTADIDLAAKEIYRGASFDNNILCLAEKEVFVMERVADELVNKMEKEGAYLLNSRELNEILKFAMIEKDGSYEVNKKWVGKDATLFLEAIGVSGHKDVRLLICETDRSHPFVMVEQLMPILPIVRLRTFEECVECAVAAESGNRHTASMFSRNVENMTKFGKIIETTIFTKNGSTLKGVGIGGEGHTTMTIAGPTGEGLTCARSFTRRRRCMLAEGGLRII

>SAMN05443270_4517_UniProt_A0A1I0KRV6
MAIGFLECAGYGAVLYAMDKACKAANVRIIGIDTINPKDATAFIPLTVQVKFEGGIDDVKEACEAAKRAALKFNSPEEVLVEMIEKPYEGTKALSHITKVSFEEENIINFRR

>SAMN05443270_4518_UniProt_A0A1I0KS71
MASTSIGLVETRGLTASIEAADAMLKAADVELVGTEKIGSGLVTVIVTGEVGAVKAATEAGEAAASRVGELVAVHVIPRPHQDIDKILPRIK

>SAMN05443270_4519_UniProt_A0A1I0KRZ0
MKTNRNAIGVLEINYYANTVVVVDQALKAAEVEIVSCHKKLGGRMCHTVLAGETSAVRAAVEAAKEAGRIVGDDNVKVSVSIENPHPEVLKLLNMIDRHENEKNSVKPEEEEHKIKEEK

>SAMN05443270_4520_UniProt_A0A1I0KTE7
MAETAVKKGMLALGMIETRGLTASIEAADAMLKAADVEMVGTEKIGSGLVSVMVQGDVGAVKAAVEAGEEAASRVGEVVAVHVIPRPHNSIGGILPFLK

>SAMN05443270_4521_UniProt_A0A1I0KTD5
MENREELIQKVTALVLDNWKRLSTQPYQVPVGISARHVHLSKEHVEALFGAGYRLTPMKALSQPGQFACEEQVAVSGPAGTLPKVRILGPERKQSQVEMASGDCRILGIQPQVRSSGDLKRTPGIMLKGPKGEVLLTEGVIIADRHIHMTPEDAQWFGVSDQDRVSVSVDGPKGGVLGHVLIRVTRDSRLDFHVDTDDANAFQLKQGQWVTIRKEEAR

>SAMN05443270_4522_UniProt_A0A1I0KRG1
MILGTIMGTVVSTRKCRNLVGFKLLLVEPYYGDQKDIFVAADTIGAGIGELVLVTTDNTTQYALDRSAPIDAYIVGIVDAPPQPGR

>SAMN05443270_4523_UniProt_A0A1I0KRF9
MEQETLKILAVADPAVEGYLDKELGIIDGYGGNVDFHIVPWADYYPMMMKAFTGEADYDIVMVAGHLWLRDFVENGYLSELALEEEDILPVIAEEMKYKGKAYLSPSFCDGHMIVYRKSLLEQVLGKELGSVITPREYIETAKAYKAACGEQAVAMKADKSEIFTDALPFLRMYGGDAYDPDGSAACGKEDAVKGLKSYVELRACAVSGTDSFGNGEIAETIRQKRAAMAVTWSGQMGEVFKEGCMEPEDLGFSTFSTAWNVTWSFGICSSCRKKEAAEKFLSYLRSPEVDQKVGRMSGAPVRRGSYLEGAGDCPWFPVQQKMMELARPLPDLSKAGEKNGVLYEKIFEAFSGKKTAEEAMREAGKMMSGITEL

>SAMN05443270_4524_UniProt_A0A1I0KTS7
MKIIIIGGVAAGMSAASKIRRVDPDAKVTVYEKGGFLSYGACGLPYYVGDYNDDYRKMIARSRETFTKMGIETFLRHEVQSVDVDRKEVLVKNLENGQEFTDSYDKLMIAVGASAVVPPFPGRELMGVHVLKSMEDGIFLKEYAKMPEIRNIVIVGGGYIGVECAEAFLNLGKNVRMLEAAPRILMPFDEEIAALAHDELVKSGVLLNTGEKVEGFYGDGLYVKGVKTDKGTYDADLVIVAVGVRPCTEFLKNTGISMGKNGGLIVDREMRTSIPDVYAAGDCILVYNEVLEEDSFLALGTVANKCGRIAGANLAGGHESFIGALGSAAIKVCGLELGRTGMGEGDAIRLSKDYKTLIIQANDHPAYYPDPTPITIKLIYEKGTKRLLGAQTCGQKGAVLRADVFAVAIHCRMTTAELGMTDLIYAPPFSGVWDAIQIACNAAK

>SAMN05443270_4525_UniProt_A0A1I0KRY4
MSKIMTLQEAAARIHDGDILGLGGNVLHRAPMAMVRELVRQKKRDLKLVKTAGAMDVDMLCFGGCVSSVDAGFISYESEYSLAGHYRKAVESGAVKGNEHACYTVISALRAASYGVGFMPVKGLVISDLIDANDYFIRVEDPFTKEPVTVVKAIRPDVAVIHVQEADEDGNARITGPLFEDVLFSRAAKRVILTAENIVHGSAFTGSSKKADIPHFLVEAVVRVPKGAAPCSCPGSYDIDGKNLKEFKGLKDLDGLNAYLKAFEKSDYKG

>SAMN05443270_4526_UniProt_A0A1I0KRG9
MMEEKYRVSDIMVCAMARLIPDGSKVFHGVSSHMPMIALLLAKALHAPGAVHLNIPGGTDPDPVRLKKYTSAGPELLERATAYFPLMEVFDLAMRGELDVAFLSGIQFDSHGNVNASVIGDYKKPKVRMPGGAGSAVLIPTAKRAILWRTKHDKRTFVNQVDFVTTRGNVERIITPLCIFKMENGEMVLDTIHPTSSLEEVQENTGFPIKSSHIAYTPLPTKEELSVLKRIDPGDFRNIEF

>SAMN05443270_4527_UniProt_A0A1I0KRI1
MALERINAVGTSFFGRGSIGLLPDEFKKRGFKRALIVTDPFLYKNGTGDKVGACLLKAGVEYAIYYLVEPNPTTMVVGDCLEAAKALEVDLLVAVGGGSAIDTAKAVSIVMANGGKVEDYEGVERSLDPGMPIVAVNTTAGTGSEVTSFYIVTDPVRHSKMCMVDSNCMVTIAVNDVDFMMSMPKALTASTGMDAMTHAIEAAVAKRATPYTDKDALWAMGVIGTYLPEAVADGSNEKAREMMAYAEYSAGMAFSNAGLGMVHAMAHSLGGLMNLPHGICNAVLLPFVMEFNGSRPEAAERYKKVAEGLKIPGASAMTGEQAVKETVACIRRLSREVGITQSLKELKVNPEDFKALAEIALKDTCMEDNPFKPTLGQVIEVYRNAYG

>SAMN05443270_4528_UniProt_A0A1I0KTH2
MKKLINVPENYVNEMLEGIYLAHPDYVTYTEGDLRCLVTSNKVEGKVGIATGGGSGHLPLFLGYVGKGMLDGCSVGDVFQSPSAEQMLNVTKRIDSGAGVLYIYGNYNGDIFNFDMAAEMADMEEDIHVESVVAGEDVASPKAAPGEKNTRRGVAGIFFVYKCAGAAAAAGKDLQEVKRIAEKAAANVRTMGVALTPCTVPRVGHPGFEIGEDEMEIGMGIHGESGIRRGKLETADEITLEMMEKILEDIPYCAGDEVAVLVNGLGATPLDEQYIVARKVNMILEEKGIKVHRYYVGEYVTSIEMAGLSISLLKMDEELKGYLDAPADTPFFKQGIV

>SAMN05443270_4529_UniProt_A0A1I0KRI0
MNQQELIAILGRISKIMVENRNYLIELDSVVGDSDLGLTMTDGFQAAYDAVSDGSEPDLGKLLYKAGKTMGNKVPSTMGTLMAAGLMRAGKTLKGKTELSGADAVSLFEAYEAGVADLGKAKLGDKTFLDGFHPGVQVLKAEVEAGVSLEEAFGKAAAAAWNGFEQTTTMIAVHGRAATRGEASRSLKDPGAAVAALIMKAVADR

>SAMN05443270_4530_UniProt_A0A1I0KTU5
MNYNQIAKDIITNVGGSDNIRGLTHCFTRLRFELRDTKKAKKEVIEHLEGVISVVESGGQFQVVLGTKVTKVYEAILPMISLEENTADSEEKGSVWNRILIAISSMFTPMVPAIAASGLLKGLLTIARITASNHGLDITVNQTYILIMAATDALFYFMPIILAYTSAKVFKANEFIAMALGGTMCYPAVVSLMTGSEAVSMFGIAITKASYASSVIPIIIGVFILAYIQKFLEKIIPEVLKIILVPGISLLVMIPATFMVFGPIGIYIGNGINFIYTGMMNLSPALCGAFVGGMWCVFVIFGAHRALLPIGINDVAQFGHQNLLAFAGAANFSQGGAALGVMLKTKSKDLKTVAASAAISASVCGITEPAIYGCNLRLKKPMIYAIICGAIGGAIMGVGGVYGDSFANNGVLTFATYAAFGMKTFIYYLIGVAVSFFGAMGLTFLFGFDDISGKGERVSGSDEGAAEFQDVLGITSGADILISSPVEGTAVPMTSVNDEVFSSMALGNGVAIVPEKGEVVAPEDCTVTMVYPTLHALGLMLDSGAEMIIHVGINTVQLEGKHFKKHVEEGTHVTKGTRLLSFDLDALKKEGYDTVVPIIISNTAAFSEVTGITGSGASLQKPVIAIKNN

>SAMN05443270_4531_UniProt_A0A1I0KRJ0
MEMTKTNFPKNFLWGASSSAFQIEGGWDEGGKGITVADVNSFKRSDIQADSKVASDFYHHWEEDIRLMKELGMQIYRFSISWARIIPDGDGEINQAGIDFYHKIIDRLLEQGIQPFITLYHFDLPYALARKYNGWESRECVKAFERYAKICFKAFGDRVTYWQVHNEQNLMVRVNERMNITTDDAWEADRQRAQMDYHMFLAHALAVKACHSIIPDGKIGPAVSSTCTYPESNRPEDVWAARMNDWFKTDYCLDMHYYGRYPGYYMRYLEERNIVPVMEPEDEEILKGGAMDFIALNYYRTLCVRYLPTDEGHLAGERAFPINEVDFDQYGYFHHIKNEHLVSSEYGAQIDPLGLRTVLNSYYQKYHLPLIITENGLGAADTLTEDGKVHDEYRISYLKAHIKAISQAIEDGVSVMGYSPWSFMDLLSSHEGFRKRYGFVYVNRDDHDLKDMSRVKKDSYFWYKRVIETNGDEL

>SAMN05443270_4532_UniProt_A0A1I0KS03
MRVVKVMNNSLLLALDDSGREVILMGKGIGFNKSIGHHLKSEDIEKVFVLKDRSISKNIIRLASEIDSTYFELAKQVIDYAIDTYGMVLMEHIYLGLTDHLSFAVKRNNEGILIQNFYTQTLKRFNPKEFKVGLYALQLVRERLQVELPEDEAGNIAFHFINAQTNNLNSTDNQKIFETVKGILDIVKYNFSILYDEDGIGYTRFVTHLRLFAQRLVNGSQDLYDYEDSFYTHVLESCPREYECVKKIGVFIREKFESKLSKQEEMYLAVHIHRILEEYAQREKT

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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