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BMC type: PVMlike


Organism: Gracilibacillus kekensis. Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

         SAMN05216179_3628 (fasta)
               SAMN05216179_3629 (fasta)
                   SAMN05216179_3630 (fasta)
                         SAMN05216179_3631 (fasta)
                                SAMN05216179_3632 (fasta)
                                          SAMN05216179_3633 (fasta)
                                                 SAMN05216179_3634 (fasta)
                                                      SAMN05216179_3635 (fasta)
                                                           SAMN05216179_3636 (fasta)
                                                                    SAMN05216179_3637 (fasta)
                                                                     SAMN05216179_3638 (fasta) P_ocean PVMlike (HMM details)
                                                                         SAMN05216179_3639 (fasta) HMMptac_3_eut2 PVMlike (HMM details)
                                                                          SAMN05216179_3640 (fasta) H_cyan PVMlike (HMM details)
                                                                           SAMN05216179_3641 (fasta) H_cyan PVMlike (HMM details)
                                                                             SAMN05216179_3642 (fasta) H_evergreen PVMlike (HMM details)
                                                                               SAMN05216179_3643 (fasta) H_teal PVMlike (HMM details)
                                                                                 SAMN05216179_3644 (fasta) H_mint PVMlike (HMM details)
                                                                                            SAMN05216179_3645 (fasta) HMMalddh_1_eutpdugrm PVMlike (HMM details)
                                                                                                 SAMN05216179_3646 (fasta) HMMaldol_2_pvm1 PVMlike (HMM details)
                                                                                                        SAMN05216179_3647 (fasta)
                                                                                                                SAMN05216179_3648 (fasta)
                                                                                                                       SAMN05216179_3649 (fasta)
                                                                                                                                 SAMN05216179_3650 (fasta)
                                                                                                                                         SAMN05216179_3651 (fasta) HMMreg00356_1_pdu1d GRM5 (HMM details)
                                                                                                                                                  SAMN05216179_3652 (fasta)
                                                                                                                                                       SAMN05216179_3653 (fasta)
                                                                                                                                                            SAMN05216179_3654 (fasta) HMMnopfamclust3_1 GRM5 (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_evergreen
      2x H_cyan
       H_mint
       H_teal

BMC-P(map on tree)

       P_ocean

(complete list of loci)

Protein sequences:

>SAMN05216179_3628_UniProt_A0A1M7QUS6
MTYKKQTTLAHGGHHQGYHEEATGAVNTPIYLSSTFHQKQLNEMGPYDYTRSGNPTRTQLEKTIASLENGTDGFAFSSGMAAISSAFMLLHSNDHIVISKDVYGGTFRCVTQLLSQFSISHTFVDMTDIDEVARAIQSNTRVIYMETPANPLLQITDIRAIVALAKENNCYTYLDNTFMTPLHQQPLDLGVDIVLHSATKFLSGHSDIVAGLAVTKDNRLAEKLSFVQNTYGAVLSVQDCYQLLQGMKTLEPRFNKSTRSAQQIAEHLSNHTSIENIYYPGLASHPGADVHASQSTSPGAVLSFELKKGIDVQQFANHVSLPVIAVSLGAVESILSYPATMSHAAMPVEEREARGISDRLFRLSVGIEDVEDLLNDLENALNQSTAVKL

>SAMN05216179_3629_UniProt_A0A1M7QV79
MYLSNLKVEADQLPKKVIVCGDPDRATLIAKSLEENKLLAQNREYYTYVGYFNNEYIAVVSHGVGASGAAVCFEQLIQGGVEEIIRVGTAGSYQKEVRPGSLVISTASVSTDGFSSQIVPKGFPAVADLSVSNKLLAETKKVSFPIFSGITLTLDVFYQGVVPFPHQQYQEAGVLAVEMEIAALYSIASIRQVKAGAIVAIDGYADSNLAEDYNPHTDQIKQAIDQAVIIALNALTN

>SAMN05216179_3630_UniProt_A0A1M7QUU8
MKKADRLKKAKVPPRNEKYGDRLPPGQTLTKKFPILHEGEVPEYDLDKWSLKVFGEVEQEVVFNYEDLMSLPQTTIVRDIHCVTRWSKFDNSFTGVKFTDFLKEIGVKDTAKYVMVYGDYDYDSNIPLEDLLKNDILIAHSYDGKPLTPQHGYPFRLVVPHLYFWKSVKWIRGIEFMKEDRQGFWERNDFHNYGDPFKEERFSIEDAYMPEDEWQKKEYD

>SAMN05216179_3631_UniProt_A0A1M7QVQ5
MSSLFDLSLIDSTLRMMAPLLLAGLGGAICARVGIFNVGLDGLMLMGAFIGVAANAFTNNIWLSILIAVVGTLIFSLLFGYMVIHLQANMIVTGIAINFLSIGATTFALRTIFDVQGAYYNNEMVGLPTWRIPVIDDIPLLGNLLSGQSPVVYLGILITIAMYIFLKKSVLGSHFDAVGINPVAAKSQGIKIKKIQYQAVIISGILCALGGVQLSLGQVTMFSENMTGGRGFIALVATMLGQSNPIGVFLSSSLFGFTEAISIRFQGLNIPTNFTLMLPYVITILAMFIFKDRTQLNAMKNSQGSSR

>SAMN05216179_3632_UniProt_A0A1M7QUZ5
MSKMKGHISNIIQPVFAIFVGLAVGTIAILLAGESVFLTYREMWEGAFGSLYFLSNTLERSIPIILAGLGVAFAFRAGFFNLGAEGQLVMGAVTTAIVTVYLPFQGFLNLVISIGAGMLIAGLLSFFAGWMEQKFQINLLISTLLLNYIAVLFAGYLVSEPFRDTTSSGGVAHSVMVEDASKLPKLLTGMNVHYGFVLAIIITILLAFIIKRTTFGYEVRMLGQNMFFAQYGGINRKKVMFISMLISGMLAGLAGSVEVMGMHYRFIEGALTTPQFAWTGLMAALLANSNPVGTAIIAIFLAALDTGALGVERNTDVPNAISDIIQAVLILFISAKFTMAFIKSKRKRGAK

>SAMN05216179_3633_UniProt_A0A1M7QV27
MLELRGITKKYGEFTANDQIDFSLVKQEIHAIVGENGAGKTTLMRMLYGMEEPTSGDIFVHDKKRKIQSPNDAIGLGIGMVHQHFMLFPSFTIAENVVFHHEPRKKWRYDRKKANQEVEQLAKKFGMEINPNQKISDAPVGVQQRVEILKVLYQGAEIIILDEPTAVLTPLEVKDLLNSLRELVKMGKSIILITHKLNEVMEVADRITVLRDGKVSGSLKKEATDTEELSRLMVGRELQKKQLPKVTSGKAVLDVNQVYVNDSKNKAAVENISVQVHQGEIVGVAGVSGNGQSELIQAITGLVKTSAGKIRINDHDVTNHSVRQIRDRGLSHIPEDRYLWGAAKSASILDNLIMTDYRKSPLAQRGILNKGKIHSYVNNSIKRFDVKASSINTSAQYLSGGNLQKLIAAREIQKDTPLLLAAEPTRGVDIGAMEFIHEQIIEKRNNGDAVLLISSELSEILALSDRVLVMFEGKIVGEFDRENVSEEKLSLLMAGGTYE

>SAMN05216179_3634_UniProt_A0A1M7QVB0
MRKNLLFLLVLGFLAFVLVACGTESEDESSNGENDEGNAENSESKEEAKSVAVVLTDQIGVNPFFQQIADGAKQAAEETGLEINVIESSDTTETKQNLEVAVAEGYDLILTATFDAVDPLTTVAEANPDRDFAIIDAIVDLPNVKSAEFKEYEASFLLGAAAGLATETDTVGIIPAQDIALLDKYIVGFQEGVAHVNENAEVLVNYVGSFEDPAKAKEIALQQNSNGADFIAAAAAVSDLGVFEAAAEAGFYTSGQDIDRTVEDPEHVVLSQLKNTDVVAYDFVKEYGNGEFSTGVQSFGLAEDGVGLTYVTAESESPLNDFIGQDTIDQVIEIKDQIISGEIEVKNPLEQ

>SAMN05216179_3635_UniProt_A0A1M7QVX8
MVNNYRISDLMTCTIADMLEDGETVFHGVSSQMPMVAMHLARHSHAPNLVHLNIPGGVNPESIKKASYSSAGADLVEAGESNFGLDEIFDLSMRGKLDVAFLGGVQFDRHGNINASVIGDYDKPKVRLPGGAGSAVLIPTAKKAIIWRTKHDPRTFLEKVDFVTTRGNLWKIITPLCVFVFQNGQLELDTIHPHTTIEEVQKQTGFPLVYDEVRYTKSPTRKQLQILQRIDPDDFRSAEM

>SAMN05216179_3636_UniProt_A0A1M7QVY8
MKKLTTLQTAVSGIKDHATLALGGNVLHRAPMAFVRELARQQKSGLRLVKTAGAHDIDLLCAVDAVKVVDAGFVSYETVYGLPPHYRAAVQTGRVKTNEHACYTVISALRAASTNVPFMPVNGLKFGDLIDRNDYFVVVEDPFTKEPVTLVRAIVPDVAVIHVQECDEDGNAVIIGPKYEDVLMSRAADKVIITTEQVVSKYKMKQQRDRIAIPGFLVEAVVHVPKGAQPTSCHQKYDVDDKALRTFLSLKEKQEFKSFIDSYKKLDYGAERGNIRW

>SAMN05216179_3637_UniProt_A0A1M7QV44
MKLIVIGGVAAGMSAASKLKRIDQNAEITVYEKGEYVSYGACGLPYYVSGENDDHTKMIARTKQQFEQKGISVNIFHEVIKVAPERKQIMVRNVNTGQMFLDHYDKLLVATGTSAIVPPFDGLELDNIHILKTMEDGLALKEIAHQPHIKNVVIVGGGYIGMELAEAMHGLGKDVRIIEQAEKILLPFDREITDIAMEHLQENNVDVHLNERVESFNGYQSVQQVITSKGTYEADLVILSIGVRPATKFLDGTGIQLAANGAIKIDREMRTNIEDIYAAGDCAEVYHFVKQENAYLPLGTNANKCGRIAGENIAGAHRKYIGTLGSAAVKIIDLELARTGLSEAEAKDLSIDYKVEFVKAANHPGYYPGQTPLWIKLICESRTRRIIGAQAIGQSGAVLRIDMFAIAIQNQMPADELGMTDLCYAPPFAGVWDAVHIASNAIK

>SAMN05216179_3638_UniProt_A0A1M7QVJ6
MVIGKVINRVISTRKYDTLQGYKLLVIEPYNGENKEWFVAADTIGAGEGELVLVSFGSAVQHALHQHAPIDAVVVGIVDQAPDGL

>SAMN05216179_3639_UniProt_A0A1M7QVB6
MNEERKSAIYLAITQAVMEEIKANQIEVVNDRNSRVPVSISARHVHLEKAHADILFGKDYTFQKYRDISQPGQYACEEQVTIVGPKSEIERVRIVAPLRKQTQVEVSRTDGFTLGLKPPVRHSGDVSGSSPISIIGPKGRIDLEEGCIIADRHIHMSPMDAQTFGVENHQKVQIQVDGEKAGIMGNVTIRVSERYALDMHIDTDDANAFAITGKEYLRLIK

>SAMN05216179_3640_UniProt_A0A1M7QV85
MSDSLGVIETRGLTASIEAADAMLKAANVEVVGSEKIGSGLVSVIIKGDVGAVKAATEVGAEAAGRVGEVVAVHVIPRPHSDISKLLPQFK

>SAMN05216179_3641_UniProt_A0A1M7QVD4
MSDSLGVIETRGLTASIEAADAMLKAANVEVVGSEKIGSGLVSVIIKGDVGAVKAATEVGAEAAGRVGEVVAVHVIPRPHTDVNKLLKLSK

>SAMN05216179_3642_UniProt_A0A1M7QV63
MIQHEAIGIIETKYFPVAMEMLDQVTKTADVEFLTSHNQLGGKLVSLIIGGSISDVTLAIETAKRVDQTKPDQPLKNAVVITNPHPEILKYAIPSTKKAEKQQTAKKQATRKTRTTKKQATKTIEEDENNE

>SAMN05216179_3643_UniProt_A0A1M7QW58
MKKSLGLIEVIGTVTATIAIDAMSKHAFVEVTKFDQAGSGLLTIMIEGDLASVQAALEVGADQASMHGQVVAVKVIPKPDQQLYGKLIPNKEGESS

>SAMN05216179_3644_UniProt_A0A1M7QVB9
MGNAVGLLEVLGFSVAMTAMDQACKTADVEIQAMDCNNPSSGNHAKIPVVVQVKFTGNVSDVKIALETARHTAKQYIEEQDIVTSFIPNQAPGLEKLLGIGKVTRP

>SAMN05216179_3645_UniProt_A0A1M7QVG3
MQLNEKDIQTIIDSVLKNVEAAVENRQPTQASGQSSEQQPIKMKQLSPSAPSNTFNMSSNKDGVFERVTDAIEAASKAQEVWMKQYTLEEKENLINSIRQAVAQQVNHFAKSALEETGLGNYEDKVLKLSLTVEKTPGTELLQTETFSGDDGLSFVEQTPFGVIGAVTPVTNPIDTIVNNGIGMIAAGNAVVFNVHPSAKKTSREMIQLLNQTIVNAGGPENLLTMVQEPTIETVQEIANHPSVKLLVGTGGPGMVKSLLKSGKKAIGAGAGNPPVIVDETADLKQAAKDIIEGASFDNNLLCIAEKEVFVLDQVADDLIFELLNQQVHMLDHQQLEKVMKLTLKENTEGIPGGCSYLSRDYLVSKDWVGKDATQILEQIGVSNVQTKLLICEVDAEHPYVQLEQLMPILPIVRVKSVDEAIEKAVKAEHGNRHTAVMHSNHIKNVTKFAKAIGTTIFVNNGSSLSGVGYRGEGFTTMTIAGPTGEGVTSARTFTRQRRTVIANGGFNIRG

>SAMN05216179_3646_UniProt_A0A1M7QVH2
MYQKKYYSDFEAKKWMVEIGKRIYQKNFVAANDGNISVRVGPDTIWTTPTGVSKGYLTPDMMVKMRLDGTIIAGNRKPSSEVKMHLRVYRESEDTNAVVHAHPPMATSYAIAGIDLEKPVSPEAVVLLGRVPVAPYATPSTEEVPDSITPLIKEHHAVLLANHGALTWGRDLFEAYYRMESLEHYALMLTYSTNILNKANELNCNQISDLVEMRNKMGIKTGGVPPCNVEEQSSTPAASKSKEQVLQDIVEKVTKRVIEQLQKGGAL

>SAMN05216179_3647_UniProt_A0A1M7QVC4
MADHVTVIESVKLDDANDAIILLDQTKLPNKKEFLQLKTVDDVWDAIYQLKVRGAPAIGIAAAYGIYIVTKNSTASDFEAFYQEFKKAKEKLASSRPTAVNLFWALDRMEARLMKEKEATISEIIRALKNEANLIKKEDQEVCEAIGRHALEVLEPGWGILTHCNAGTIATAKYGTALAPIYLGEEKGYDFKVFADETRPLLQGARLTAWELNEAGVDVTLICDNMASIVMSQKKIQAVLVGCDRVAANGDAANKIGTSGVAILAKHYGIPVYVCAPMSTIDLNTETGNDIEIELRPEEEIKTKWYSESMAPEQVKTYNPAFDVTDHTLITGIITEKGIVSPSYKENLAKLFD

>SAMN05216179_3648_UniProt_A0A1M7QVA0
MTDFSTEYFTMNEEQAMEYAKKKLDYFKSDAELTCKEIGDGNLNYVFQIVDEKNKNSIILKQAGPVARISDEFKVSPDRNRIESDILKIQYEYVPEHTPKTYRYDPVMNCFAMEDLSEYEIMRSALIKHQTFPEFADHITTFMVKTLLLTSDVATNAKEKKALVKSFINPELCEITEDLVYTEPFYDCERNEVFPATRPFIEKEIWGDKQLQLETAKLKFEFMTNAQSLIHGDLHTGSVFIKKDSTKVIDPEFAFYGPAGYDIGNVVANLIFAYANGQATISDAEERDQFQKYITTTIRDVIDLFKVKFNKLWQETDKEFVANYEGFQNYYLNSILKDTAAVVGLELTRRIIGLAKVADITSIKQEEARQKAEINCLTAAKQFILNRETFKTGDNFVFQIKKALD

>SAMN05216179_3649_UniProt_A0A1M7QW99
MSASSNTSNSSSSPKQNKQSFDFFQFLYKYGTIITIILLIVIFSIANPAFLQWSNIENILRSISIVTIIAIGLTISLSVNGFDLSIGSVASLANAVVISMFVWYGQSTLIAILVALVAAILVGLLNSFLIVKMRIPDMLLTLATMFVIQGVALTYTRSATISENMIMPDGSYSEGMITDVFSLLGKAPYIIILMLVIVFIVHIFLTYTKHGRYMYVIGGNEEAARLSGIPVNKYKVLAYVLSALLAAIGGIVLASRVMQAEINAGENYLMDAVAAAFIGLSVLGAGKPNALGTFVGAVLIGILANGLVMMSVPYYAMDIVKGGVFALALAVTYYKLK

>SAMN05216179_3650_UniProt_A0A1M7QVI9
MPQSILKMKNITIDFPGVRALDDAQFLMHTGQVHALIGANGAGKSTLMKVLSGAYTHYTGDIILNDKKIEIRSPQDAKELGIQIVYQEVDTALIPYLTVGENIMLNKMVNGMGKRQFIQYSQIHKEASSLLERLNIHVSSRRLVRTLTLAEKQMVLIARAISRDCRYLILDEPTAPLSNTETDQLFEIVRQLRSSNVGVIFISHRLQELFEICDEITVMRNGNFISHNQINEVTIDSVVEKMLGKQMEEQFPTMEREVKEKVFEVKHLRDDEKVEDVSFHVCAGEVIGLAGLVGAGKTEICKALFGESSHLEGIVKMHGKTLNIRNSNQAVNYGIALVPEERRKEGVLVEEKVSTNLTSAHLSSFVRRFSFLNFKKERTVSAEMVEKLGVKTPSIETKLSNLSGGNQQKIAIGKWLIADADVYIFDEPTKGVDVGSKKDIFTLILELAKRGKSIIYASSELTEIVGITDRSYVIYDGKVVKELQTNKTTEEQLLFYSTGGRDS

>SAMN05216179_3651_UniProt_A0A1M7QW66
MKNSKMWLFAIVITLLSILTACGQDDESSTDEGNSNESAETTDLEGVPEALQSGEQLEIMVIRKIGGDDHTQQFLAGTQQEGQALGMKVDTFSANGDTTSFHDTISQAINQEYDGLIISHGDDDTTVELIQEARDKGIEVVAFDTNEGALEIDGVTLTSQNDEELATLALDKLVEEHPEANIGYLWVDGFPPMVRRNNVYETVLEENPGIKEVKRFGDATDPQTKTQEAVGAWLTELPEGEIDAIFATWDAFAVGATRAIQEAGREEIDVYGIDVSNADLQLMQEENSPWKYTAAVDPKLIGAVNVRLLAKKFAGEETPQEASLEPSMISQEELNASDEEVNMETLADVVEGWGESDQFKEDWMATLKEHHSN

>SAMN05216179_3652_UniProt_A0A1M7QVF1
MGDKHIETLLLHGGQTPDPTTGSRAVPIYQTTSYVFEDTEHAEKLFSLQENGNIYSRLMNPTLDVFEKRMALLEGGVAAVATASGMAGISMSILNIASAGDEIVAATNIYGGTYNLFSITLPRYGIKVHFVDPTDPTNFKKAINHKTKAVFAETIGNPSLHVLDIPSVSKIAHEAGVPLIVDNTFATPYVCRPIEQGADIVVHSATKWIGGHGTSIGGIVIDGGHFDWNSNKYPGFIEPDRSYNGIVYAKDFGDIAFATKLRVQLLRDLGACLSPFNAFQLLQGLETLNLRVQRHNDNALALAKKLESHPAVSWVTYPGLTSHSSHEYAKQKLENGFGSVLVFGIKGGREAGSKLINNMELWSHLANVGDAKSLIIHPATTTHLQLSGEELKASGVSEDMVRLSVGLENIDDLFSDLDQSLRKATNLSPSTSGEPELDNNSEDIVNQLTKEVIKRLQNKRI

>SAMN05216179_3653_UniProt_A0A1M7QVG9
MFVIFDLSIIEWIIIVCCGLLIGFAKAGVASMGILVVTIFMMIFPARESVGILLPLLIIGDLFAVTYYRRDVVWRYLFSLVPWVLIGIVLGYFVLDVVTSEQLKPMVGILVLALIVLHISREKLGEKFVEMLPESKVFTISMGILAGFTTMIGNAAGGVMAIYLLVKGLPKKEFVGTGAWFFLFVNVIKIPFYISLGIITVESIKFNAWLIPAILIGALIGVKVIKIMPQKVFQILVLVFAALGAIRLIIG

>SAMN05216179_3654_UniProt_A0A1M7QW87
MDQQVIFITGASRGIGRNMAIYFAKRGYTVIGSGRNMKKVDEVREELLQYSGDHRMVTMDVTNLEEVQSTLKYVIDTYSKIDVWVNNAGSFQAIGKTWEVAPELFKQDIETNVIGTYQCAASVIPIMLSQNHGKLINLVGGGTLDAFPYGNGYGTSKTAIARFTENLSVELSEDPIEIYALDPGLNDTDMTKYQRTSDVGKKYLANIEKLFEDNIDVSQDQAPSWVENIVLGKLKAFQGRIITVYDILEELNKKASQTKNQDYRFLRLQDF

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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