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BMC type: PVMlike


Organism: Clostridium sphenoides. Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

         NCTC507_02079 (fasta) HMM13382deam_1_buf1 PDU1F (HMM details)
               NCTC507_02080 (fasta)
                       NCTC507_02081 (fasta)
                                 NCTC507_02082 (fasta)
                                        NCTC507_02083 (fasta)
                                                NCTC507_02084 (fasta)
                                                       NCTC507_02085 (fasta)
                                                            NCTC507_02086 (fasta) HMMreg00455_1_GRM5 PVMlike (HMM details)
                                                                  NCTC507_02087 (fasta) HMMaldol_2_pvm1 PVMlike (HMM details)
                                                                           NCTC507_02088 (fasta) HMMalddh_1_eutpdugrm PVMlike (HMM details)
                                                                             NCTC507_02089 (fasta) H_mint PVMlike (HMM details)
                                                                              NCTC507_02090 (fasta) H_cyan PVMlike (HMM details)
                                                                                NCTC507_02091 (fasta) H_evergreen PVMlike (HMM details)
                                                                                  NCTC507_02092 (fasta) H_cyan PVMlike (HMM details)
                                                                                      NCTC507_02093 (fasta) HMMptac_3_eut2 PVMlike (HMM details)
                                                                                       NCTC507_02094 (fasta) P_ocean PVMlike (HMM details)
                                                                                              NCTC507_02095 (fasta)
                                                                                                       NCTC507_02096 (fasta)
                                                                                                            NCTC507_02097 (fasta)
                                                                                                                 NCTC507_02098 (fasta)
                                                                                                                         NCTC507_02099 (fasta) HMM00465alcdh_3_mix PVMlike (HMM details)
                                                                                                                                NCTC507_02100 (fasta)
                                                                                                                                    NCTC507_02101 (fasta)
                                                                                                                                                 NCTC507_02102 (fasta)
                                                                                                                                                          NCTC507_02103 (fasta)
                                                                                                                                                               NCTC507_02104 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_evergreen
      2x H_cyan
       H_mint

BMC-P(map on tree)

       P_ocean

(complete list of loci)

Protein sequences:

>NCTC507_02079_UniProt_A0A381JHV6
MVLYSKHIILENQEFDGFLEMEHGKIKALHKDYTGQYEDFSDFVILPGFIDIHIHGWATGSFWFEKSADALKEMCRTLPYAGVTSYLATTGADTIPEIERCIKAADDACEADYPGAEMLGVHLEGPFINPLYRGMQREECCILPSLKVMEDIYNSFRNKELCRYMTIAVEQDGAREVLEFCKEKGIQTSVGHSGATFSQIKEIKDAGIGGFTHTFSGMRGFHHRELGVAGAALYFDDMMCEFAKQTGMTVSHEAFDIAFRIKGSKRIIMTTDCSGLAQTRTEFDHYVRKMKFIKEGDKVRISHYDGREEWMDPKDYQAVRELELGYIGSIQNMARHTSVDWFDIMRMTSLNPARYIHADDRKGSIEPGKDADLTIVDSNLNLVSVFCRGKEIRE

>NCTC507_02080_UniProt_A0A381JH71
MKCAVSDFDRTLYIDGCISAKNLNAVGDWQAAGNRFVIATGRNESSVRVFLEKYSIKPDALILNNGALLLDETGKELFCRTIDDQTAREVLWYLHGLGEEGSGVSMRNGKVNVLSSSGATTQKPCDGQVSIDQIHSLKEIIQIHRRRQDLQWIRTLCARLNERFPLISAYANVWNGDIVAKGVNKSAAVKWISRYWGGFDEIRTIGDSFNDLQMINDYGGATLRSGDPEVQATASLIVEDVAEYLSMP

>NCTC507_02081_UniProt_A0A381JHD4
MKKRLAMVLAAAMVLSTTACGSSGTAATAAPASTEAKTEAAKTEPATTAEKVENAQSTGSLAGKKIAVVRNLAAGDHTQQFLDGCVSEGKKFGWTVDTFVTDGDDAKAQETVAQVIAKDYQGIIVSHGQLSYSYDMLKPARDKGMEVVTFDTMPFKGGDASGELLSGVTSTAQNDQALAELSLGYMMKEFEAKGGKYPMKVLKTFMGPGIPPLDRRNEIYTKLEAEGKIQTLEVIAPSDSANARGDMTNKTAAILPKYPEGSVDAIWGCYDELAKGVLQALNDAGRTDIPMYTIDVSNDDIQLMVKNPDVWKSTAAVDPKLIGIVDARLLALKFMGEETPDYFNLNACNIETTQLGVQTTMSDLSSIIDGWGDAEDPKGALYTDTIKNKYVN

>NCTC507_02082_UniProt_A0A381JJQ7
MTEVKLEMKDISIEFPGVKALDGVDFGLKSGTIHALVGANGAGKSTLMKVLAGVNTHYTGQIYVGGEPVEIRCPKDAKNLGIEIVFQEVDTALIPYLSVAENVMFNTLVNKMGRKQIVHWKEIRQAAETVLKKLNVDVDINKKVSGLTLAQKQMVLIARCVAEKCRFLILDEPTAPLSNSETLELFRVVRELAKENVGVVFISHRLSELYEICENITIMRDGKLVTELPLSRELEVNTLVEYMLGRSYEDNYIKKKCEIGGPLLEIENLSEREGKVKDINMTVCKGEIIGVAGLVGAGKTELCKTLFSAYQQSGGTMKLNGKVIKAKGPTQAVKHGLALVPEERRKEGVLISDPVVSNISVAAMEKYTNRLSVVNKKREKVDAKNMIRDLGIKTPSENQVVALLSGGNQQKVVVGKWLNKDSEVYIFDEPTKGIDVGAKQDMYELIEGLAARGKGIIYATCEFQEILSICDRIYVMYDGEIIKELNAADTNEKELLYYSTGGK

>NCTC507_02083_UniProt_A0A381JI93
MSGAEKVKKKRNVGDFVTKWGTIATMLIMFILFTFGNWSKDTGASMFLTQSNMITILRAVSITTIIAIGLTFALAVNGMDLSIGATAQFANVFVMTCFVWHNINIGVSIILTVLICLSVAVINSILIVKFKIPDMVAALSVMFMYQGVSMTYSKGGAITERMTRADGTQAPGLVPEAFRALGKEPWLIIIMICVVLFAYFFLNYTKHGRYMYAVGGNPEAAQLSGIPVAKYKILAYFLSAVFASIGGICLAARVGTAQISAGDSYLMPSVCAAYIGFSVLGAGKANAFGTFAGAVLVGMLENGLIMMSVPYYAMNIIKGAVLAIALAMTYASGKTKNVN

>NCTC507_02084_UniProt_A0A381JHB3
MSKYDSYFLMKAEEVPDYVKEKLTYFDADARLECKEIGDGNLNYVFRVKDPASGKTIIVKQAGEALRISAEMHVSTDRGRIEAKILGIQDSYAPGLVPKVYLYDGTMCAMVMEDMIGHTMMRTGLLKHETYPKFADHVTTFMVNSLLRTTDVVLGHKEKKELVKSFINPDLCEISEDLVYSEPFIDYNHRNNVFPPNAEFVKKELYEDQALHLEAAKLKFEFMNNAQSLIHGDLHTGSVFINKEHTYIFDPEFAFFGPMGYDIGNVIANMFFAWCNGDATIEDEKEKEEFCGWCLSTISDIVDLFIEKYNKVFDEHVTETMAKVPGFKEWYLEGILSDTAGVAGLESIRRTVGMANVIDITTIPDEEKRARAEKIVITLAKNYIMNRRSFQSGADYLNAIKEAIGKFESR

>NCTC507_02085_UniProt_A0A381JHS5
MSEETKKSIMDYDTVALDEENNALVIIDQTQLPYHTEILSLTKQEDIWNAIYLLQVRGAPAIGVAAAIGIYLAAREIKADGFEDFYTEFQKAKDYLDSARPTAVNLSWALKRMEQVVLKNKEKTVPEIVEILHKEAIEIREEDIWVCKMIGEYGLSLVKPGDGLLTHCNAGQLATVKYGTATAPMYLGHEKGYNFRIFSDETRPLLQGARLTSFELKESGLDVTVICDNMSATVMRNGWVDAVFVGCDRVAANGDTANKIGTSMVALAAKRYGVPMYICAPTSTIDMNTLTGKEIHIEERPAEEVVEMWYKKRMAPEGVKVFNPAFDVTDNDLIAGIVTEYGIARAPYTESLKEIFRRKEEALKAKEM

>NCTC507_02086_UniProt_A0A381JJL3
MLAVTRKAKIKDIILEKKSVTVTELSKIFSVTEETIRRDLKQLEDDGFLTRTYGGAFIQDGVENNVELTIRETAYMESKQAIAKKCLSVIHNGDSIFLDASTTSLQLAKALQGMRLTVVTNSLLIINELYDKEDIRLISIGGSYTPRDKAFVGNTAIRNLESFYLDKTFMSCRSVSMEHGITDSNEAIAAIRQTLMTRSNHVYLIADHSKFDKTSFIRISGFEAIKGLVTDKQMNEQWREYLLKNNVELLEAVEA

>NCTC507_02087_UniProt_A0A381JJL5
MMTVQGVKYMSDFEAKKAILDIGRRMYEKGFVASNDGNISCKVGPNTIWTTPTGVSKGFMTQDMLVKMDLNGKVLMGRWKPSSEVKMHLRVYKENPDVQAVTHAHPLVATSFAIAGISLDAAILTEAVLGLGSIPVAKYATPGTEEVPDSIAPFVKSHNGVLLANHGALTWGKDIHQAFYRLESIEYYATILMYTGNIIGRQNLLSCDQVEKLLDIRHKLGITAGGIPPCSVEVTNMKDVVTAADVRPAEQTGTGPVPVLKGVTSIVRPGESLPVGCGCTGVTQKTLTLEEQKPVEAEALGKAKKEIIAEVVRRVIEQLN

>NCTC507_02088_UniProt_A0A381JIT9
MEIGAKEIELIVKEVLAGIENRGVKPSYFSSQSENGVFERVEDAITAAHTAQREWVEHYRIEDRRRIIEAIRMTAKSHAKTLAKMVWEETGMGRFEDKIQKHMAVIEKTPGVECLTTDAISGDEGLMIEECAPFGVIGAITPSTNPTETLINNTISMIAGGNSVVFNVHPGAKRCCAHCLKLLHQTIVENGGPANLITMQKEPTMEAVSKMTADPRIRLMVGTGGMPMVNALLRSGKKTIGAGAGNPPVIVDDTADIDLAAKEIYRGASFDNNILCLAEKEVFVMERVADELVNKMEKEGAYLLNSRELNEILKFAMIEKDGSYEVNKKWVGKDAALFLEAIGVSGHKDVRLLICETDRSHPFVMVEQLMPILPIVRLRTFEECVECAVAAESGNRHTASMFSRNVENMTKFGKIIETTIFTKNGSTLKGVGIGGEGHTTMTIAGPTGEGLTCARSFTRRRRCMLAEGGLRII

>NCTC507_02089_UniProt_A0A381JHX6
MAIGFLECAGYGAVLYAMDKACKAANVRIIGIDTINPKDATAFIPLTVQVKFEGGIDDVKEACEAAKRAALKFNSPEEVLVEMIEKPYEGTKALSHITKVSFEEENIINFRR

>NCTC507_02090_UniProt_A0A381JH81
MASTSIGLVETRGLTASIEAADAMLKAADVELVGTEKIGSGLVTVIVTGEVGAVKAATEAGEAAASRVGELVAVHVIPRPHQDIDKILPRIK

>NCTC507_02091_UniProt_A0A381JHE4
MKTNRNAIGVLEINYYANTVVVVDQALKAAEVEIVSCHKKLGGRMCHTVLAGETSAVRAAVEAAREAGRIVGDDNVKVSVSIENPHPEVLKLLNMIDRHENEKNSVKPEEEEHKIKEEK

>NCTC507_02092_UniProt_A0A381JJR8
MAETAVKKGMLALGMIETRGLTASIEAADAMLKAADVEMVGTEKIGSGLVSVMVQGDVGAVKAAVEAGEEAASRVGEVVAVHVIPRPHNSIGGILPFLK

>NCTC507_02093_UniProt_A0A381JIA4
MENREELIQKVTALVLDNWKRLSAQPYQVPVGISARHVHLSKEHVEALFGVGYRLTPMKALSQPGQFACEEQVAVSGPAGTLPKVRILGPERKQSQVEMASGDCRILGIQPQVRSSGDLKGTPGIMLKGPKGEVLLTEGVIIADRHIHMTPEDAQWFGVSDQDRVSVSVDGPKGGVLGHVLIRVTRDSRLDFHVDTDDANAFQLKQGQWVTIRKEEAR

>NCTC507_02094_UniProt_A0A381JHC3
MGTVVSTRKCRNLVGFKLLLVEPYYGDQKDIFVAADTIGAGIGELVLVTTDNTTQYALDRSAPVDAYIVGIVDAPPQPGR

>NCTC507_02095_UniProt_A0A381JHT5
MEQETLKILAVADPAVEGYLDKELGIIDGYGGNVDFHIVPWADYYPMMMKAFAGEADYDIVMVAGHLWLRDFVENGYLSELALEEEDILPVIAEEMKYKGKAYLSPSFCDGHMIVYRKSLLEQVLGKELGSVITPQEYIETAKAYKAACGEQAVAMKADKSEIFTDALPFLRMYGGDAYDPDGSAACGKEDAVKGLQSYVELRACAVGGTDSFGNGEIAEAIRQKRAAMAVTWSGQMGEVFKEGCMDPEDLGFSTFSTAWNVTWSFGICSSCRKKEAAEEFLSYLRSPEVDQKVGRMSGAPVRRGSYLEGAGDCPWFPVQLKMMELARPLPDLSKAGEKNGVLYEKIFEAFSGKKTAEEAMREAGKMMSGITEL

>NCTC507_02096_UniProt_A0A381JJM2
MKIIIIGGVAAGMSAASKIRRVDPDAKVTVYEKGGFLSYGACGLPYYVGDYNDDYRKMIARSRETFTKMGIETFLRHEVQSVDVDRKEVLVKNLENGQEFTDSYDKLMIAVGASAVVPPFPGRELMGVHVLKSMEDGIFLKEYAKMPEIRNIVIVGGGYIGVECVEAFLNLGKNVRMLEAAPRILMPFDEEIAALAHEELVKSGVLLNTGEKVEGFYGDGLYVKGVKTDKGTYDADLVIVAVGVRPCTEFLKNTGISMGKNGGLIVDREMRTSIPDVYAAGDCILVYNEVLEEDSFLALGTVANKCGRIAGANLAGGHESFIGALGSAAIKVCGLELGRTGMGEGDAIRLSKDYKTLIIQANDHPAYYPDPTPITIKLIYEKGTKRLLGAQTCGQKGAVLRADVFAVAIHCRMTTAELGMTDLIYAPPFSGVWDAIQIACNAAK

>NCTC507_02097_UniProt_A0A381JJM4
MSKIMTLQEAAARIHDGDILGLGGNVLHRAPMAMVRELVRQKRRDLKLVKTAGAMDVDVLCFGGCVTSVDAGFISYESEYSLAGHYRRAVESGAVKGNEHACYTVISALRAASYGVGFMPVKGLVISDLIDANDYFIRVEDPFTKEPVTVVKAIRPDVAVIHVQEADEDGNARITGPLFEDVLFSRAAKRVILTAENIVHGSAFTGSSKKADIPHFLVEAVVRVPKGAAPCSCPGSYDIDGKNLKEFKGLKDLDGLNAYLKAFEKSDYKG

>NCTC507_02098_UniProt_A0A381JIV1
MMEEKYRVSDIMVCAMARLIPDGSKVFHGVSSHMPMIALLLAKALHAPGAVHLNIPGGTDPDPVRLKKYTSAGPELLERATAYFPLMEVFDLAMRGELDVAFLSGIQFDSHGNVNASVIGDYKKPKVRMPGGAGSAVLIPTAKRAILWRTKHDKRTFVNQVDFVTTRGNVERIITPLCIFKMENREMVLDTIHPTSSLEEVQENTGFPIKYSHIAYTPLPTKEELSALKRIDPGDFRNIEF

>NCTC507_02099_UniProt_A0A381JHZ3
MALERINAVGTSFFGRGSIGLLPDELKKRGFKRALIVTDPFLYKNGTGDKVGACLLKAGVEYAIYYLVEPNPTTMVVGDCLEAAKALEVDLLVAVGGGSAIDTAKAVSIVMANGGKVEDYEGVERSLNPGMPIVAVNTTAGTGSEVTSFYIVTDPVRHSKMCMVDPNCMVTIAVNDVDFMMSMPKALTASTGMDAMTHAIEAAVAKRATPYTDKDALWAMGVIGTYLPEAVADGSNEKAREMMAYAEYSAGMAFSNAGLGMVHAMAHSLGGLMNLPHGICNAVLLPFVMEFNGSRPEAAERYKKVAEGLKLPGASAMTGEQAVKETVACIRRLSREVGITQSLKELKVNPEDFKALAEIALKDTCMEDNPFKPTLGQVIEVYRNAYG

>NCTC507_02100_UniProt_A0A381JH90
MKKLINVPENYVNEMLEGIYLAHPDYVTYTEGDLRCLVTSNKVEGKVGIATGGGSGHLPLFLGYVGKGMLDGCSVGDVFQSPSAEQMLNVTKRIDSGAGVLYIYGNYNGDIFNFDMAAEMADMEEDIHVESVVAGEDVASPKAAPGEKNTRRGVAGIFFVYKCAGAAAAAGKDLQEVKRIAEKAAANVRTMGVALTPCTVPRVGHPGFKIGEDEMEIGMGIHGESGIRRGKLETADEITLEMMEKILEDIPYCAGDEVAVLVNGLGATPLDEQYIVARKVNMILEEKGIKVHRYYVGEYVTSIEMAGLSISLLKMDEELRGYLDAPADTPFFKQGIV

>NCTC507_02101_UniProt_A0A381JHF4
MNQQELIAMLGRISKIMVENRNYLIELDSVVGDSDLGLTMTDGFQAAYDAVSDGSEPDLGKLLYKAGKTMGNKVPSTMGTLMAAGLMRAGKTLKGKTELTGADAVSLFEAYEAGVADLGKAKLGDKTFLDGFHPGVQVLKAEVEAGVSLEEAFGKAAAAAWNGFEQTTTMIAVHGRAATRGEASRSLKDPGAAVAALIMKAVADR

>NCTC507_02102_UniProt_A0A381JJS8
MNYNQIAKDIITNVGGSDNIRGLTHCFTRLRFELRDTKKAKKEVIEHLEGVISVVESGGQFQVVLGTKVTKVYEAILPMISLEENTADSEEKGSVWNRILIAISSMFTPMVPAIAASGLLKGLLTIARITASNHGLDITVNQTYILIMAATDALFYFMPIILAYTSAKVFKANEFIAMALGGTMCYPAVVSLMTGSEAVSMFGIAITKASYASSVIPIIIGVFILAYIQKFLEKIIPEVLKIILVPGISLLVMIPATFMVFGPIGIYIGNGINFIYTGMMNLSPALCGAFVGGMWCVFVIFGAHRALLPIGINDVAQFGHQNLLAFAGAANFSQGGAALGVMLKTKSKDLKTVAASAAISASVCGITEPAIYGCNLRLKKPMIYAIICGAIGGAIMGVGGVYGDSFANNGVLTFATYAAFGMKTFIYYLIGVAVSFFGAMGLTFLFGFDDISGKGERASGSDEGAAESQDVLGITSGADILISSPVEGTAVPMTSVNDEVFSSMALGNGVAIVPEKGEVVAPEDCTVTLVYPTLHALGLMLDSGAEMIIHVGINTVQLEGKHFKKHVEEGTHVTKGTRLLSFDLDALKKEGYDTVVPIIISNTAAFHEVTGITGSGASLQKPVIAIKNNQ

>NCTC507_02103_UniProt_A0A381JIB6
MEITKTNFPKNFLWGASSSAFQIEGGWDEGGKGITVADVNSFKRSDIQADSKVASDFYHHWEEDIRLMKELGMQIYRFSISWARIIPDGDGEINQAGIDFYHKIIDRLLEQGIQPFITLYHFDLPYALARKYNGWESRECVKAFERYAKICFKAFGDRVTYWQVHNEQNLMVRVNERMNITTDDAWEADRQRAQMDYHMFLAHALAVKACHSIIPDGKIGPAVSSTCTYPESNKPEDVWAARMNDWFKTDYCLDMHYYGRYPGYYMRYLEERNIVPVMEPEDEEILKGGAMDFIALNYYRTLCVRYLPTDEGHLAGERAFPINEVDFDQYGYFHHIKNEHLVSSEYGAQIDPLGLRTVLNSYYQKYHLPLIITENGLGAADTLTEDGKVHDEYRISYLKAHIKAISQAIEDGVSVMGYSPWSFMDLLSSHEGFRKRYGFIYVNRDDHDLKDMSRVKKDSYFWYKRVIETNGDEL

>NCTC507_02104_UniProt_A0A381JHD2
MNNSLLLALDDSGREVILMGKGIGFNKSIGHHLKSEDIEKVFVLKDRSISKNIIRLASEIDSTYFELAKQVIDYAIDTYGMVLMEHIYLGLTDHLSFAVKRNNEGILIQNFYTQTLKRFNPKEFKVGLYALQLVRERLSVELPEDEAGNIAFHFINAQTNNLNSMDNQKIFETVKGILDIVKYNFSILYDEDGIGYTRFVTHLRLFAQRLVNGSQDLYDYEDSFYTHVLESCPSEYECVKKIGVFIREKFESKLSKQEEMYLAVHIHRILEEYAQREKT

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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