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BMC type: PVMlike


Organism: Faecalibacterium cf. prausnitzii KLE1255. Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

   HMPREF9436_00761 (fasta)
        HMPREF9436_00762 (fasta)
                     HMPREF9436_00763 (fasta)
                            HMPREF9436_00764 (fasta)
                                HMPREF9436_00765 (fasta)
                                  HMPREF9436_00766 (fasta)
                                                          HMPREF9436_00767 (fasta)
                                                           HMPREF9436_00768 (fasta)
                                                              HMPREF9436_00769 (fasta)
                                                                     HMPREF9436_00770 (fasta) HMMalddh_1_eutpdugrm PVMlike (HMM details)
                                                                           HMPREF9436_00771 (fasta) H_fuchsia PVMlike (HMM details)
                                                                                  HMPREF9436_00772 (fasta) HMMptac_3_eut2 PVMlike (HMM details)
                                                                                    HMPREF9436_00773 (fasta) P_ocean PVMlike (HMM details)
                                                                                                 HMPREF9436_00774 (fasta)
                                                                                                             HMPREF9436_00775 (fasta) HMM00465alcdh_3_mix PVMlike (HMM details)
                                                                                                                      HMPREF9436_00776 (fasta)
                                                                                                                                          HMPREF9436_00777 (fasta)
                                                                                                                                           HMPREF9436_00778 (fasta)
                                                                                                                                            HMPREF9436_00779 (fasta)
                                                                                                                                              HMPREF9436_00780 (fasta)
                                                                                                                                                  HMPREF9436_00781 (fasta)
                                                                                                                                                       HMPREF9436_00782 (fasta)
                                                                                                                                                               HMPREF9436_00783 (fasta) HMMnopfamclust3_1 RMM1 (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_fuchsia

BMC-P(map on tree)

       P_ocean

(complete list of loci)

Protein sequences:

>HMPREF9436_00761_UniProt_E2ZGH5
MKSTYLLPWFKMTTWYFRLSRLLEVSNVKKRTKNHSADADRIFMLVKNHVLAVSGMGDEAPPTPGGRNGGSDVL

>HMPREF9436_00762_UniProt_E2ZGH6
MKLRPLPAEETEGVMFYDPAATGERIQNLRKDREVTQEQLAIDLNISDRYMRNLEKGEKVPSVDLFVELRERFGSSLDYIVLGVSASQREQELQDQLQMLRKELKEMQRRILVMLEMLGESA

>HMPREF9436_00763_UniProt_E2ZGH7
GAGLRLAVYLRGKNAKKYRHGMEYGSARWGTPKDIEPFMAPKFADNIILTKTERLMMSNRPPDPKNARNKNVLVVGGSGSGKTRFFIKPNLLQCDSKTFPVSFVVTDPKGSLIYECGHALAKKGYLIKTMNTINFHKSMHYNPFAYVHSEKDILKLVTTLMTNTKGEGSGGDPFWEKSERLLLTALIAYLHYEAPVEEQNFATLLEMLNTMQVLEDDEEYQNPVDLLFEELAKKKPNSFAGRQYKLYKLAAGKTMKSILISCGARLAPFDIQEIRDATMYDELELDKLGDRKTALFLIMSDTDSTFNFLISMVYTQLFNLLCDKADDQYGGKLPVHVRCLIDECANIGQIPNLEKLVATIRSREISACLVLQARSQLKAIYKDNADTIVGNMD

>HMPREF9436_00764_UniProt_E2ZGH8
MQRMFEDGTCRVKNGYYTRTVEFQDINYQLALPEDRTAIYEEWCSFLNFFDSSIHFELSFVNTATDSTEFEKSIRIPFQKDGFDDVRAEYSQMLRQQLSKGNNGLTKRKYLTFGVSGESMQQVKARLDHIQNDLLNNFHRLGVQAKPLDGRERLKLMHGIFNLDGESKFYFDWKKLAAGGLTVKDAIAPTAFAFQNSRTFQMGGIFGSVSYLSITASDLSDQLLKDFLDMDS

>HMPREF9436_00765_UniProt_E2ZGH9
MISTTKLSARTVLRAIKAAFQLYQSKASQGKQSVRTLLRQNRGVSSVEISKTGIRGLEHYAKKYGIDYAIRKDSSEVPPRYLVFFKAPDAEAFHSAFKEYSASLLNKDKRPSVLARLQELVQAAAELPGKVRHKEQERGL

>HMPREF9436_00766_UniProt_E2ZGI0
MTTKKLTKLLALYLPYLLLGLVATNFGEAWRLAEGKELGDKIMAMMGTIPVAFANPLPSLHPLDFLVGLCCGAGLRLAVYLR

>HMPREF9436_00767_UniProt_E2ZGI1
FTFLPFSAFAANTEIDFNSPDFKLNFPDAEFQRFLKERCDTNHNGKLDAQELSITEMTITDDYKIKNLEGIRFFEDLEKLDCHGIGLTTLNVGKNFKLRELDCSYNQLKDYLYILSSGLKILNCSHNNLTSMDLGILSGLKLEEVDCSYNKIWRIVMRSEEELIKFDCSNNELTALDVSRCYQLKQLNCSVNQLVELDVKNQTNLTLLDCHHNELIELNVSRNQNLASLTCDGNQLTTLDLSKNNSLSHLSCAENRLACVDFSHMVGSTINADGNRRPIAVRTDGKFDLATLPGFDVSKATNWTGGSVSDTTLSVNAGVEEVSYQYDCGKGVKPTFIFETSLPINEKNFPDPNFRKYIKTYKAGGRDVLTVEEQRKVESIEVKGWNISNLKGIEAFPNLKELNCENNSIQKLDLRQNPELEKLICNKNQLTQLDLSKNPNIYFLNCSWNQLEQLDVSHLKDLVTLDCSHNDLEQLDVKNSKSLVALNCSANQLTELDVDVTHKPNLERVECQNNQLTSLILGQNKLLKKLNCAHNQLTQLNLNNMISLKDLNCFNNQLTVLDVSDSPKLTTLWLGDNHLTSLNLDNNPKLDFSLTDIYSGDNVYTVTLNPDRTFDLSTLPGNFDKSRVTGWEHGKANGNILTVDEGTNVVYYAYKCRSDILEVSFKLDVTGTGGTVPPVTPPEPPVTPSEPPVTPPSGGGDGGGAVVIVAAAGAVAAGVVGYGVYNYV

>HMPREF9436_00768_UniProt_E2ZGI2
MQAKKTNPEKTKNPEMLTLDSTYRIGNRSFIVEPVFKEESSQTLGEVLLRLMKSESEKL

>HMPREF9436_00769_UniProt_E2ZGI3
MTFREAADRESGLCYNIGVQVNLLFDCPKKGASMKQSSNKKSREATAFLYERLSRDDNLEGESYSIGNQKKLLTKVAKEKGYTNLVHFLDDGISGVTMNRPGFVEMMQQL

>HMPREF9436_00770_UniProt_E2ZGI4
TEKSFCNSKGVRILCFAEKEVFAVNTAYDGLLHELQKQGAYLLNKAQTEQLVNIVLQPKKGGGHEVNKKWVGKDAARILETIGVHVPDTCRLAICEVPADHPFVLVEQMMPVLPIVRCQSFEQAVEDAVVAEHGNRHTASIFSKDVDHMTRFARVIETTIYVKNSATKAGVGIGGEGHCTMTIAGPTGEGITCAKSFCRRRCMLAEGGLRII

>HMPREF9436_00771_UniProt_E2ZGI5
MKALGFIETKGLVGNIDATDAMLKAADVEFIGSDTIGAGLTTVIVTGEVGAVKAATEAGEEAASRVGELFCVNVIARPHADLARIMPAKGPATGKSGLPAGEQVPLDAALGMIETNGLTASIEAADAMLKSADVSLVGQEKIGAGLVTVFVQGDVGAVKAAVEAGQTAASRIGEVVSALVIPRPHASVSECMPELR

>HMPREF9436_00772_UniProt_E2ZGI6
MVYHDISQEQLLLLITQAVQAELQKRSRQVPVGISVRHIHLTRDDVDKLFGYGYQLTPKKALSQPGQFACEECLDIIGPKGELKHVRILGPERSATQIELAQTDCRNIGIKAPVRSSGDTKGTPGVTLRGPNGTLTVPEGVMIADRHIHMTPAQAAAFGLADGDRVQVKIDGPKPGVMGGVLIRANDKCALDFHIDTDDGNAFLLKQGQLVTVLGKEE

>HMPREF9436_00773_UniProt_E2ZGI7
MILGIVKGTVVATRKMPELVGYKFLLVEPVFGSKKDTIVAGDNIGAGVGEMVLVTTDETTQHGLDHPSPIDAFIVGIVDNPPTLSK

>HMPREF9436_00774_UniProt_E2ZGI8
MKIIIIGSIAAGVSAAARLAAAQRGAQITVYEKGGFYSCGTGGLPHYLCEDLDSLNKAIQAKETELNAQGITAHLRHEVRGIDAAARKVTVCDLATGRVFEDHYDKLVLATGSSNRVPQVPGSDRVGVQTLKTVEDLIFLKEFVRTPYVRDIVILGGSWAGLEIAKSFLKLGRNVRIIEKEQQLLPQFDPEVSKLIQKELEAQGVQFNLGEQVRSFPGRTFVEQVQTNRGTYPCDLCVVAIGVTPNTGLLAGTGAQLAPNGAVLIGADLATSVPNIYAVGDCAACRDGSLRTSSLKVADLEIARTGLTETEARKAGLRVKSAMATGTDRPGICPNPHRITIKLVYEANTRQVLGAQAWGEKNVSARINAIAVAIRAGMTVEALGQVDFVYSSSSCSIWDPVQIVCGQAQ

>HMPREF9436_00775_UniProt_E2ZGI9
MAERINAVKTSFFGKGAIRLLGPELQKMGIRRALLVTDRFLYDSGAAARVGQVLSDAGVEYAVYYNVQPNPTVQVVNDCIAAARTLQVQLLVALGGGSAIDTAKAASIVVACGGTVEQYEGENKSSKPGLPIVAVNTTAGTGSECTSFYIVTDPVRHSKMAMVDPNCMVSIAVNDTDFMSSMPPKLTAATGMDALTHAIEAALSKNANPLTDKDAYWAMQAIVQNLPRAVANGQDEAARTMMAYAENVAGMAFSNAGLGMVHAMAHALGGHYNLPHGVCNAVLLPYVLAFNSRSPVCRERFMTIAAAMGLQGTFTPDTAAPAVIQFVRQLSAGVGIPANLAQLNKVDPADFAALAELALHDTCMSTNQITPTRDEVVAVYTAAFRG

>HMPREF9436_00776_UniProt_E2ZGJ0
METREKQAYLIEAHKCDEMLLTLLRMLDVPWNDIFIHMDSKNTDYQPETVECRMKYAKVFHAKRHSVVWGGVSQVKAELVLLKTAVAHGPYQHYHLISGVDLPIQTQEDIRAFFEANPDREFVHFDPHPFSPFNDERVYYRHFFQNIDLRRHPVLGVINGILLSGQKLLKIKRNQDVHFTKGSNWFSCTDGFARYLLTKEEWILQVLDKTFCSDEFFVQTLIAQSPYQDKIYQGPGDTSARAIDWDRGNPWVWKYADLEQLKASPCMFARKFDIEKEPELVHEIERLYAPHI

>HMPREF9436_00777_UniProt_E2ZGJ1
MNKKQKKNLQRIIIALILVLILKLLPQFPTPVELVLYCIPYLVVGWDVLRKALLGIKNRQPFDECFLMAVATVGAFALGDYVEGCAVIIFYQIGELFQSVAVGKSRQSISSLMDIRPDYANIEGEDGKLEQVDPDDVEIGTVIVVQPGERVPIDGVIVEGASALNTAALTGESLPRDVQTGDEVISGCVNMTGLLKVKTTKEFGESTVSKILDLVENSSMKKARAENFITRFARVYTPAVCYGALALAFIPPIVLLLMGQPARFGDWVYRALTFLVISCPCALVISIPLSFFGGIGGASACGILVKGSTYLEELARTGIVVFDKTGTLTQGTFKVTGIHPAEGTSEEQLVEAAALAESWSKHPISLSIKAAYGREIDPNRVTDVQELGGHGVTAKVDGRTVAAGNARLMEKLGLKAPAVSETGTIVHVAIEGMYAGYLLIADVVKPHSAQAIRGLKDAGVRKTVMLTGDAEPVAKAVSAELGLDEYHAGLLPGDKVDQIETLLAAKRPKENLAFVGDGINDAPVLSRADVGIAMGALGSDAAIEAADVVLMDDDPAKIALAMRIARRTLRIVYQNIVFALAIKFACLVLGAIGMASMWTAIFADVGVMVLAVLNATRALYTKDLAKKNEQ

>HMPREF9436_00778_UniProt_E2ZGJ2
MGRITLRRAGISTTFPHKNGYSTVLPVFSTQFFRRKSAFPRLFYVFSANGVEN

>HMPREF9436_00779_UniProt_E2ZGJ3
MTERASPLKKKASAARIRRFSESSNECADAFYFVCDCVVQ

>HMPREF9436_00780_UniProt_E2ZGJ4
QQYDTPEGANCLTVGKRHLSQKDAAVEAVRNIGLNQVRQVEHTIFSEHPAWKATFEERLRVLRNAM

>HMPREF9436_00781_UniProt_E2ZGJ5
MYHSYADIPNPWDRLRWCRYGLDLLQKEVAAMVGMEEWLYQDLESGAFHRSFTPELADKLAALYGIPVEDILDDYTLFFHRGGGVFLREYRQVKGWNRQQLADHAKVSRTSIRCWESGQKTISQKCFCHLVENLGSNFPSMLRM

>HMPREF9436_00782_UniProt_E2ZGJ6
MILWGGVGMFLSLLQFFATKFLVLALHLESGSFPRPLSAREETEAFSALRAGDPAAREKLIRHNLRLVAHIVKKYYALPGDQDDLISIGTIGLMKAVDTFDSDRRARFSTYASRCIENAILSPAHFGMEKRIHLFHAMTHLRQNGFLGAERAAPFFCFRGCHVRVVV

>HMPREF9436_00783_UniProt_E2ZGJ7
MAGENNKVVIVTGGSSGIGRCTASALKENGCIVYEFSRRNIPMEGVTHLSVDVTDEDAVNAAVQQVIQKETKIDAVINCAGFGISGAVEFTSMEQAKAQFDVNFFGTVTVNKAVLPFMRHQGKGHIVNISSVAAVAHIPFQTFYSASKAAVSSYSYALANEVKPYGIHVTVVELGDICTGFTKARQKSILGDDEYGGRISRSVSQMEQDEQNGMDPARIGRYIAGIVEKKNPAVVYVAGAQYKFLSLLCKLLPAAARGKIVGKIYE

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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