BMC type: PVMlike


Organism: Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

          Closa_1810 (fasta) HMM13382deam_1_buf1 PDU1F (HMM details)
               Closa_1811 (fasta)
                       Closa_1812 (fasta)
                                  Closa_1813 (fasta)
                                         Closa_1814 (fasta)
                                                  Closa_1815 (fasta)
                                                          Closa_1816 (fasta)
                                                               Closa_1817 (fasta) HMMreg00455_1_GRM5 PVMlike (HMM details)
                                                                      Closa_1818 (fasta) HMMaldol_2_pvm1 PVMlike (HMM details)
                                                                                Closa_1819 (fasta) HMMalddh_1_eutpdugrm PVMlike (HMM details)
                                                                                  Closa_1820 (fasta) H_mint PVMlike (HMM details)
                                                                                    Closa_1821 (fasta) H_cyan PVMlike (HMM details)
                                                                                      Closa_1822 (fasta) H_evergreen PVMlike (HMM details)
                                                                                        Closa_1823 (fasta) H_cyan PVMlike (HMM details)
                                                                                            Closa_1824 (fasta) HMMptac_3_eut2 PVMlike (HMM details)
                                                                                             Closa_1825 (fasta) P_ocean PVMlike (HMM details)
                                                                                                     Closa_1826 (fasta)
                                                                                                               Closa_1827 (fasta)
                                                                                                                     Closa_1828 (fasta)
                                                                                                                          Closa_1829 (fasta)
                                                                                                                                  Closa_1830 (fasta) HMM00465alcdh_3_mix PVMlike (HMM details)
                                                                                                                                         Closa_1831 (fasta)
                                                                                                                                             Closa_1832 (fasta)
                                                                                                                                              Closa_1833 (fasta)
                                                                                                                                                   Closa_1834 (fasta)
                                                                                                                                                               Closa_1835 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_evergreen
      2x H_cyan
       H_mint

BMC-P(map on tree)

       P_ocean

(complete list of loci)

Protein sequences:

>Closa_1810_UniProt_D9QZE2
MVLYSKHIILEHEEFDGFLELEHGKIKALHKEFSGQYEDFSDFIILPGFIDIHIHGWATGSFWFEKNAGALKEMCRTLPYAGVTSYLATSGADTIEEIQRCIKAADEAYEADYPGAEMLGVHLEGPFINPRYRGMQREECCILPSLKVMEDLYNGFRNKELCRHMTIAVELEGAREVLKFCKEHRIQTAIGHSGATFAQIQEIKDAGVGGFTHTFSGMRGLHHREPGAAGAALYFDDMMCEFAKQTGMTVSHEVFDIAYRIKGSGRIIMTTDCSGLAQTQTEFDHYVRRMKFIKDRDMVRIVHYDGREEWMDPKDYQAVREIELSYIGSIRNMAKHSRVDWFDIMRMTSLNPARYIYVDDRKGSIAPGKDGDLTVVDSNLNLISVFCRGKEIRERDEICGK

>Closa_1811_UniProt_D9QZE3
MKFAVSDFDRTLYIDGWISPENIGAMNKWQAAGNLFAIATGRNEASLHGFLENYSLKPDYLILNNGALILDKTGKELFCRTIDDSTAQEVLWFLHGLGDEGSGVSMRKTKVNVLSGSGTTTQKPCRGQVTIDQIHDLKEILQIHRRRKDVLWIKELCARLNAMFPLISAYANVWNGDIVAKGVNKSAAVDWIVRLWGGFDEIRVIGDSANDLQMIKDYGGAAMQQADPEVRAAAAMVVRAVADYLTMT

>Closa_1812_UniProt_D9QZE4
MKKKLAMVLAAAMVLSATACGSSGTAATTAATEAKTEAAKTDQTTAAEKVEKAQATGSLEGKKIAVVRNLAAGDHTQQFLDGCVSEGKKFGWTVDTFVTDGDDAKAQETVAQVIAKDYQGIIVSHGQLSYSYDMLKPARDKGMEVVTFDTMPFKGGDASGELLEGVTSTAQNDQALAELSLGYMMKEFEAKGGKYPMKVLKTFMGPGIPPLDRRNEIYTKLEADGKIQTLEVIAPSDSANARGDMTNKTAAILPKYPEGSVDAIWGCYDELAKGVLQALNDAGRTDIPMYTIDVSNDDIQLMVKNPDVWKSTAAVDPKLIGIVDTRLLALKFMGEETPDYFNLNACNIETTQLTAQTTMNDLGSIIDGWGDAEDPKGALFTDEIKNKYVN

>Closa_1813_UniProt_D9QZE5
MTEVKLEMKDISIEFPGVKALDGVDFSLESGTIHALVGANGAGKSTLMKVLAGVNTHYTGQIYVGGEPVEIRCPKDAKNLGIEIVFQEVDTALIPYLSVAENVMFNTLVNKMGRKQVVHWKEIRQAAAAVLKKLNVDVDINQQVSGLTLAQKQMVLIARCVAEKCRFLILDEPTAPLSNSETLELFRVVRELAKENVGVVFISHRLSELYEICESITIMRDGKLVTNLPLTKELEVNTLVEYMLGRSYEDNYIKKKCEIGGPLLEIENLTEKEGKVKNINMTVCKGEIIGVAGLVGAGKTELCKTLFSAYQQAGGTMKLNGKVIKAKGPTQAVKHGLALVPEERRKEGVLITDPVVSNISVAAMEKYTNWLSVVNKKREKEDAKNMIRGLGIKTPSENQVVALLSGGNQQKVVVGKWLNKDSEVYIFDEPTKGIDVGAKQDMYELIEGLAAKGKGVIYATCEFQEILSICDRIYVMYDGEVIKELNAADTNEKELLYYSTGGK

>Closa_1814_UniProt_D9QZE6
MSGAEKVKKKRNVGDFVTKWGTIATMLIMFILFTFGNWSKDTGSSMFLTQSNMITILRAVSITTIIAIGLTFALAVNGMDLSIGATAQFANVFVMTCFVWHNINIGVSVILTVLICLSVAVINSILIVKFKIPDMVAALSVMFMYQGVSMTYSKGGAITERMTRADGTQAPGLVPEAFRALGKEPWLIIIMICVVLFAYFFLNYTKHGRYMYAVGGNPEAAQLSGIPVAKYKILAYFLSATFASIGGICLAARVGTAQISAGDAYLMPSVCAAYIGFSVMGAGKANAFGTFAGAVLVGMLENGLIMMSVPYYAMNIIKGAVLAIALAMTYASGKTKNAN

>Closa_1815_UniProt_D9QZE7
MSKYDSYFLMKAEEVPDYVQEKLSYFDKDARLECKEIGDGNLNYVFRVKDPASGKSIIVKQAGEALRISAEMHVSTDRGRIEAKILGIQDSYAPGLVPKVYLYDGTMCAMAMEDMTGHTMMRTGLLKHEIYPRFADHVTTFMVNSLLRTTDVVMGHKEKKELVKSFINPDLCEISEDLVYSEPFIDYNHRNNVFPPNAEFVKKELYEDQALHLEAAKLKFEFMNNAQSLIHGDLHTGSVFINKEHTYIFDPEFAFYGPMGYDIGNVIANMFFAWCNGDATIEDEKEKEEFCGWCLNTISDIVDLFIEKYNKVFDEHVTETMAKVPGFKEWYLEGILSDTAGVAGLESIRRTVGMANVIDITTIPDAEKRARAEKIVITLAKNYIMNRRSFRCGADYLKAVKEATGKF

>Closa_1816_UniProt_D9QZE8
MSEETKKSIMDYDTVALDEENNALVIIDQTQLPYHTEILSLTKQKDIWNAIYLLQVRGAPAIGVAAAIGIYLAAREIQADGFDEFYTKFQKAKDYLDSARPTAVNLSWALKRMEQVVLKNKDKTVSEIVELLHKEAIEIREEDIWVCRMIGEYGLSLVKPGDGLLTHCNAGQLATVKYGTATAPMYLGHEKGYGFRIFSDETRPLLQGARLTSFELKESGLDVTVICDNMSATVMRNGWVDAVFVGCDRVAANGDTANKIGTSMVALAAKRYGVPMYICAPTSTIDMSTPTGKEIHIEERPAEEVVEMWYKKRMAPEGVKVFNPAFDVTDNDLIAGIVTEYGIAKAPYTESLKEIFRKKEEALKAKEM

>Closa_1817_UniProt_D9QZE9
MLAVTRKAKIKDIILEKKSVTVTELSKIFSVTEETIRRDLKQLEDDGFLTRTYGGAFIQDGVENNVDLTIRETAYMESKQSIAKKCLSIIHNGDSIFLDASTTALQLAKTLQGMRLTVVTNSLLIINELYDKEDIRLISIGGSYTPRDKAFVGNTALKNLESFYLDKTFMSCRSVSMEHGITDSNEAIAAIRQILMTRSNHVYLIADHSKFDKTSFIRISGFETITGLVTDKRMDEQWREYLSKNDVELYEATEA

>Closa_1818_UniProt_D9QZF0
MMTVQGKKYMSDFEAKKAILDIGRRMYDKGFVASNDGNISCKVGPNTIWTTPTGVSKGFMTQDMLVKMDLNGKVLMGRWKPSSEVKMHLRVYKENPDVQAVTHAHPLVATSFAIAGISLDAAVLTEAVLGLGSIPVAKYATPGTDEVPDSIAPFVNTHNGVLLANHGALTWGKDIYQAFYRLESIEYYATILMYTGNIIGRQNLLSCDQVNKLLDIRHKLGITAGGIPPCAIEETNMRDVVSAADARPAETAAPVLKGVTSIVRPGENLAPTGCGCTGVTRQVLPAEEVKPVQAEALGKAKEEIIAEVVRRVTEQLN

>Closa_1819_UniProt_D9QZF1
MEIGAKEIELIVREVLAGIESRGPKLSYIPAQSDNGVFERVEDAIGAAHTAQREWVEHYRVEDRRRIIEAIRMTAKSHAKTLAKLVWEETGMGRFEDKIQKHMAVIEKTPGVECLTTDAISGDEGLMIEEYAPFGVIGAITPSTNPTETIINNTISMIAGGNAVVFNVHPGAKKCCAHCLKLLHQAIVENGGPANLITMQKEPTMEAVTKMTSDPRIRLMVGTGGMPMVNALLRSGKKTIGAGAGNPPVIVDDSADVSLAAREIYRGASFDNNILCLAEKEVFVMEKAADELVNNLVKEGAYLLNPMELNEILKFAMIEKNGSCEVNKKWVGKDAGLFLEAIGVSGHKDVRLLICETDRNHPFVMVEQLMPILPIVRLRTFEECVESAVAAESGNRHTASMFSRNVENMTRFGKVIETTIFTKNGSTLKGVGIGGEGHTTMTIAGPTGEGLTCARSFTRRRRCMLAEGGLRII

>Closa_1820_UniProt_D9QZF2
MAIGFLECAGYGAVLYAMDKACKAANVRIIGIDTINPKDATAFIPLTAQVKFEGGIDDVKEACEVAKRAALKINRPEEVLVEMIEKPYEGTRALSHITKVDLAEKNIDNFRR

>Closa_1821_UniProt_D9QZF3
MASTSIGLIETRGLTASIEAADAMLKAADVELVGTEKIGSGLVTVIVTGEVGAVKAATEAGSEAASRVGELVAVHVIPRPHQDIAKILPNIKG

>Closa_1822_UniProt_D9QZF4
MKTNRNAIGVLEINYYANTVVVVDQALKAAEVEIVSCHKKLGGRMCHTVIAGETSAVRAAVEAAREAGSMVGDENIKVSVSIENPHPEVLKLLNMIDRHESEKDSAKAEENEPVIKEEN

>Closa_1823_UniProt_D9QZF5
MAEAVVKKGMLALGMIETRGLTASIEAADAMLKAADVEMVGTEKIGSGLVSVMVQGDVGAVKAAVEAGEEAASRVGEVVAVHVIPRPHNSIGQILPFIK

>Closa_1824_UniProt_D9QZF6
MENREELIQKVTSLVVENWTRLSTQPYQVPVGISARHVHLSKEHVEMLFGTGYRLTPIKALSQPGQFACEEQVAVCGRLGTLPRVRILGPERKQSQVEMAFSDCRGLGIQPQVRSSGDLKGTPGILLKGPKGEVLLTEGVIIADRHIHMTPEDSLWFGVSDQDRVSVAVNGPKGGVLDQVLIRVTQESRLDFHLDTDDANAFQLKQGQWVTIRKEVAR

>Closa_1825_UniProt_D9QZF7
MILGTIMGTVVSTRKCRNLVGFKLLLVEPYYGDKKDIFVAADTIGAGIGELVLVTTDNTTQYALDRSAPVDAYIVGIVDAPPQPGR

>Closa_1826_UniProt_D9QZF8
MERETLKVLAVADPAVEGYLDEELGILEGYGGNVDFHIVPWADYYPMMMRAFAGEEDYDIVMVAGHLWLRDFVEQGFLSELELEEEDILPVIAEEMRYKGKAYLSPSFCDGHMIVYRRSQLCQALGRELESVITPREYIEAAKACKTALGKQAVAMKADRSEIFTDALPFLRMYGGDAYDPHGTASCGKEEAVKGLKSYMELKAYAVDGTEFFGNGEIAAAIREKGAAMAVTWSGQMGEVFKEGCLERPDLGFSTFSTAWNVTWSFGICKSSGKKEEAEAFLKYLRSPLVDQKVGRKSGAPIRSGSYMEGAGDCPWFPVQQKMIELARPLPHLSKAGEKNGVLYEKIFEAFSGKKTAEEAMREAGQEIDCVK

>Closa_1827_UniProt_D9QZF9
MKIIIIGGVAAGMSAASKIRRMDPNMEVTVYEKGGFLSYGACGLPYYVGDYNDDYRKMIARSRETFTKMGIKTFLRHQVLSVDADRKEVLVRNLENGQEWKDRYDKLMIATGASSVVPPFPGRELLGVHVLKSMEDGIFLKEYAKMPEIQNVVIVGGGYIGVECAEAFLSLGKKVRILEAAPRILTPFDEEITALAQEELVRCGIELNLGEKVEGFYGDGLYVKRVKTDRGTYEADLVIVAVGVRPCTEFLKDTGISMAKNGALIVDREMKTSLPDVYAAGDCILVHHEVLEEDSFLALGTVANKCGRIAGTNLAGGHEQFLGALGSAAIKVCGLELGRTGMGEGDAKRLQKDYKTLIVQANDHPAYYPDPTPITIKLIYEKGTKRLLGAQTCGQKGAVLRADVFAVAIHCRMTTAELGMTDLIYAPPFSGVWDAIQIACNAAKG

>Closa_1828_UniProt_D9QZG0
MSKVISLQEAASRIQDGDILGLGGNVLHRAPMAMVRELVRQKKRNLKLVKTAGAMDVDLLCFGGCVTSVDAGFISYESEYSLAGHYRRAVESGAVKGNEHACYTVISALRAASYGVGFMPVKGLVISDLIDANDYFIRVEDPFTKEPVTVVRAIRPDVAVLHVQEADEDGNARITGPLFEDVLFSRAAKRVILTTENIVHGSVFKGSQKKADIPRFLVEAVVKVPKGASPCSCPGLYDIDGKNLKEFKGLKDMDGLYAYLKAFEKSDYKG

>Closa_1829_UniProt_D9QZG1
MMEEKYRVCDIMVCAMARFIPDGSKVFHGVSSHMPMIALLLAKALHAPGAVHLNIPGGTDPEPIRLKKYTSAGPELMERATAYFPLMEVFDLAMRGDLDVAFLSGIQFDFHGNVNASVIGDYKKPKVRMPGGAGSAVLIPTAKRAILWRTKHDKRTFVNQVDFVTTRGNVDRIVTPLCIFKMENGEMVLETIHPTSSLEEVKENTGFPIKCSHVAYTPLPTREELSALKRIDPGDFRNIEF

>Closa_1830_UniProt_D9QZG2
MALERINAVGTSFFGRGSMGLLPDELKKRGFKRGLIVTDPFLYENGTGDNVGACLLKAGVEYAIYYLVEPNPSTTIVNDCLNAALALEVDLLVAVGGGSAIDTAKAVSIVMANGGKVEDYEGVNRSRKPGIPIVAVNTTAGTGSEVTAFYIVTDPARHSKMCMVDPNAMVTIAVNDVDLMMTMPKGLTASTGMDAMTHAVEAAVAKRATPFTDKDALWAMGVIRTYLPEAVADGSKEKAREMMAYGEYSAGMAFSNAGLGMVHAMAHSLGGRNNLPHGICNAVLLPFVMEFNGSRPETAVRYKKVAEGLRLPGAAAMTGEQAVKESVACIRRLSKEVGITQSLQDLKVNPEDFKALAEVALCDSCMEDNPFRPTLQQVIEVYRNAYGK

>Closa_1831_UniProt_D9QZG3
MKKLINVPENYVNEMLEGIYLAHPDHVTYTAGDLRCLVTSNKVEGKVGIATGGGSGHLPLFLGYVGKGMLDGCSVGDVFQSPSAEQMLHVTKSIDSGAGVLYIYGNYNGDIFNFDMAAEMADMEEGIQVESVVAGEDVASPKAAPGEKNTRRGVAGIFFVYKCAGAAAAAGKDLQEVKRIAEKAAASVRTMGVALTPCTVPRVGHPGFEIGEDEMEIGMGIHGEPGIRRGNIETADEITSEMMEKILEDIPFAAGDEVAVLVNGLGATPLDEQYIVARKVNQILEEKGIMVHRYYVGEYVTSIEMAGLSISLLKMDEELKGYLDAPADTPFFKQGTI

>Closa_1832_UniProt_D9QZW4
MNQQELIAMLERISKIMEQNRNYLIELDSVVGDSDLGLTMADGFGAAYESVSDGAEPDLGKLLYKAGKTMGNKVPSTMGTLMAAGLMRAGKVLKGKTDLSCADVAGLFEAYEAGVADLGKAKLGDKTFLDGFHPGVQTLKAELEAGVSLREAFGKAAEAAWEGFEQTTTLIAVHGRAATRGEASRSLKDPGAAVAALIMKAVADQ

>Closa_1833_UniProt_D9QZW5
MILPLFAPDTPVVGVSGCNNRPYDEKCPVVYLDYSDQ

>Closa_1834_UniProt_D9QZW6
MNEMNKRSVSIIAVAIILATGVIGAALILTNGIVKVKASKTNVVVTGSAKQQISSDLIVWTGSFNAQSANLQDAYTKLEAGRDKVSAYLTGNGIAKDDFVFSAITTTVNYAMNEYGNYTNEIDNYALSQTVTISSGEIDKITEISRNATELLNQDVAFESDPPQYFYTKLADLKVAMLAEATKDARKRAEMIVENAGNKLGDLKYADMGVMQITPLYSNEVDDYGINDTSSLEKEITAVVHCQFEIAK

>Closa_1835_UniProt_D9QZW7
MNKIFDNEYYDLIISNSLVPDLNASNNITVLNDKFSLLHIWKNSMDACDLGLYPYDNFPSLFTLSSKISIDKSGISNIRQHPHLSLMGLGVLIGFVDTGIDYQHPAFRNRDGSTRILSIWDQTDQSGKPPTAFSFGSEYSKNHINTALKSSDPLSIVPTFDASGHGTAIASIASGSANEEQSFTGVVPQSELVVVKLKEAKENLKKLFFAPDQAMCYQESDIMLGIRYLLSVSERTELPIVICIAMGSSQGGHDGLGVLSSYLDHIVRLPKTDVTVAAGNEGNNRRHYFYYSAAAPFCNGFNLNIGKNDKKFSMEIWPFLPGKITIEIFAPNREIVQSISPASTDCQKYRLSLGQTTIWINNILLEGSSGDQLLLLRFDNPIPGIWYFQVSSIDNEPFSFHSWLPSGNLITNETYFFGSSPDNTITSPGNARTPLTVSAYNQFDGSILKESGRGFSRFGEIVPDVAAPGYHIPCAIPGNQYGSITGTGAAAAHAAGVAALIMEWGFCKGNHTSVTGVQINHMMMRGAYRNSAYTYPNNIWGYGQMDVYKLFQKIAAI