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BMC type: PVMlike


Organism: Firmicutes bacterium HGW-Firmicutes-2. Bacteria; Firmicutes.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

          CVU95_09840 (fasta)
               CVU95_09845 (fasta) HMMreg00072_4_pdu1d PDU1D (HMM details)
                         CVU95_09850 (fasta)
                                       CVU95_09855 (fasta)
                                          CVU95_09860 (fasta)
                                              CVU95_09865 (fasta)
                                                   CVU95_09870 (fasta)
                                                           CVU95_09875 (fasta)
                                                                  CVU95_09880 (fasta) HMM00465alcdh_3_mix PVMlike (HMM details)
                                                                        CVU95_09885 (fasta)
                                                                           CVU95_09890 (fasta) Ts_cement HO (HMM details)
                                                                            CVU95_09895 (fasta) P_neonBlue EUT2F (HMM details)
                                                                                CVU95_09900 (fasta) HMMptac_3_eut2 PVMlike (HMM details)
                                                                                 CVU95_09905 (fasta) H_cyan PVMlike (HMM details)
                                                                                  CVU95_09910 (fasta) H_evergreen PVMlike (HMM details)
                                                                                   CVU95_09915 (fasta) H_cyan PVMlike (HMM details)
                                                                                     CVU95_09920 (fasta) H_mint PVMlike (HMM details)
                                                                                              CVU95_09925 (fasta) HMMalddh_1_eutpdugrm PVMlike (HMM details)
                                                                                                   CVU95_09930 (fasta) HMMaldol_1_grm PVMlike (HMM details)
                                                                                                         CVU95_09935 (fasta)
                                                                                                                CVU95_09940 (fasta)
                                                                                                                      CVU95_09945 (fasta)
                                                                                                                               CVU95_09950 (fasta)
                                                                                                                                      CVU95_09955 (fasta) HMMreg00356_1_pdu1d GRM5 (HMM details)
                                                                                                                                          CVU95_09960 (fasta) HMMreg00455_2_PVM PVM (HMM details)
                                                                                                                                               CVU95_09970 (fasta)
                                                                                                                                                              CVU95_09975 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_evergreen
      2x H_cyan
       H_mint

BMC-P(map on tree)

       P_neonBlue

BMC-Ts(map on tree)

       Ts_cement

(complete list of loci)

Protein sequences:

>CVU95_09840_UniProt_A0A2N2C966
MEHPIILQMQGITKIFPGVRALDDVTLEVHRGTILSICGENGAGKSTLMKVLSGVYPHGTYEGKIIYMGEEVTFKDIKESEHAGIAIIHQELAMVPELSVTENIFLGNEIIKRGLIDWDAQRVHTVEVLKKVGLTVDPDTLIKHLGVGQQQLVEIAKALSKNVKLLILDEPTSALNEADSANLLELMRGLKDLDITCIMISHKLNEIAAISDAVTVIRDGRTVETYAVEAGQVDEDRIIRAMVGRSIENRFPVHVSKPGEVIFEVTDWRVEDPNNPGRLVCKNSNFNVRAGEIVGFAGLMGAGRTELMRSIFGHNYGIYLGGSIKIKGKEIHVNSVASAIRQGIAYVPEDRKNLGLNLLNSIRITTVSANLKGILRGGLLDLDKEYEVAEEYRRSLRVKTQSVDRGVATLSGGNQQKVVLGKWMFTGPDVLILDEPTRGIDVGAKYEIYRLIHELADHGKAVIIVSSELPELIGITDRIYTIFEGEITGMIDSKEAQQENLMKMMTSNSGS

>CVU95_09845_UniProt_A0A2N2C943
MIKVLIADDQELIRHSLEIILKNISDIQVIDTVGDGKSVIRSIRKHKPDVILMDIRMPEMDGVQCTKIIKESYPDIKIIILTSFDDDEYILSALRDGASGYLLKGITIDELVEAIHKVHSGSAMINPNIAQKFIELYSEMAKNNQLIQVDKKAIHDVTEYEWNVITHVAKGLSNKEIASKLKLSEGTVRNYLSNALCKLNLRDRTQLALWAVQTGKSEG

>CVU95_09850_UniProt_A0A2N2C961
MFIVKMMGELCRMNNKFGKKTEDHLNKNDKKSKKKEKKANVKAELANAKQEIADQKEEKSDMQAALLKADQEIANQVGEKADIQAELVIVNKEVDNQKEEKADVVAELAITIKELANQITLRKEALEKIERIMHYDSLTSLPNRAMLEEKLQHEINIAKDQDKRIGILFLDLDGFKPVRNTLGQFQEGEFIKVVATRLTNLVQESDIVARLGGDKFIIMVQNPESSEYVRKVANKIISAFRQPFEVNQNEIYVTVSIGISVFPTDGKTHEDLIKNAELAMYKAKEKGKNQSVLCTTIMKDIIRENMKLSNGLYKALERDELEVYYQPQISLDTKKIVGLEALLRWNHPVLGMVPPGKFIFLAEQNGLIIPIGKWVLHTVCKQNKTWQEAGLKPIRIAVNLSIIQFQNLEIMNQINEVLESTKLLPKYLELEITESIAMRDTVYIIDVLNTFQKLGIYISIDDFGTEFSSLQYLKLLPINRIKIPMPFIQGINVDKRDEWIIETIIVLARKMGLAVIAEGVETRQQDSFLKKRLCGEIQGYYYYKPMPAKDIEMLLQTNS

>CVU95_09855_UniProt_A0A2N2C9B1
MMKFSNKISMVVLLCLLIIGLQSGLVYAASPNFMADTPTFVFSDDSSARFNTASDQDVTIYYLVTDTVSPPPLSEEVKTGEDYGGVTIITSGNTPAVIDEMTQVNIIGLEPGSPYNAYFVLENSSHELSEVRMIESFETQVSTYTFTYNGNGNTGGAVPIDGTSYYSADIATVNGNTGNLVRTGYTFAGWNTLADGNGTSYGEDDTFVIGTSNVTLYAHWTSIDYTDASLSGLTISSGLLNPVFQLNERVFTVSVANNISSITVTPVDEDEQQATIKVNGVNATSGQAFPVNLNVGSNTIIVVVMAHDGEATETYTITVTRAASSGGNSRKRTTTPPSVPQEAVAIVVNGKVESAGTETKTTDEDKSVVLVKANSQVIESIIEDAIINDNQTGSNNLIQILVNDTISDVAKVELTGDMIKRFEDNTFDLSIKRDNVEYLIPAGAFTISTVGKDLGVTDTSLIDIIIEVKITKLDASVVKKYNEVAKANGVTFIFPPIAFEIIAKTTKADGATVEVAINKFNNYLERIMEIPPEVDPSKITTGVVFNPDGTYSHVPTEVYQKEGKWYARLKSLTNSHYSVAWNLITVKSVENHWSKDAVNDMASRLVILHAERFNPDKAITRADFTDYIIRALGLYRVGSNNEIKFKDVNTKDEGTQAIRIAHAYYIVTGYPDGTFRPDQMITREEAMVIYQRAMVITKLIGVDQNRYQSYTDYEEVEEWATSYVREVLSAHVFNGTTATTITPKANLTYAEAAQAIKNLLVTSKLINK

>CVU95_09860_UniProt_A0A2N2C948
MSFSLPAMNPDELLDALTEEQRFETSALLDYLSEEQALSAWLINNDDTNPFQIKEASPKKMNLNLPQFTDLSGSFNLPYELIDYNDSKGKYSRLDLKNVPDYIVIGEDAPTPTLLEKFQIEFKNYVCGSIKYKDIQKDTDELTKMTKTALITMISTAIGTTLGVVGTIIAPAVVLALMVVLKMGQAVYCDNYVDPYKE

>CVU95_09865_UniProt_A0A2N2C977
MVTNLLKEVHPADIMVVTIANLLENEEKVFHGVSSQLPMVAILLAKATHAKDLTYLNIPGGVNPQSLQLSSYSSAGYEVYANAEAIFPLEEVFDLSMRGELDVAFLSGVQFDVHGNVNASVIGSYTNPKVRLPGGAGSAVLIPTVKRALIWRSKHDPRTFVEQVDFVTTKGNIDRIITPLAVFKYQDERLQLESISPLTSIEEVVRQTGFEINTDHITVLPLPTSEEMRIIQQIDKKGVRYKEF

>CVU95_09870_UniProt_A0A2N2C993
MKKIISCSKAIATILDGSYLAIGGNVLHRAPMALIREIARQKKRNLKLVKTAGAHDIDVLVRAKCVASVDAGFISYETEYGLATYYRKAVESGEIKANEHACYTVISALNAAKIGVPFMPCRGIMISDLVEANDYFEKIMDPFSDEEITVIKAIKPDVAIIHVNACDEDGNAIIEGPNFEDVLMSRASKRIILSTEKIISKAQVRLNPEKIVIPSFLVESVVVSPRGCAPGSLPGKYEVEDTVIRNFLEKKDDMMFEEYLEAYRIQDQGKGGVFAW

>CVU95_09875_UniProt_A0A2N2C939
MKTIIIGGVAAGMSAASKIRRMRYDSEVVIYEKGGILSYGACGLPYFVGNEIVDENKMIIRTKSQFEKMGMGIHLYHEVISVNENEKTITVKDLTKGITFVDHYDNLLIASGASPIIPDWEGIGHPIVKTLSTIEDGRDIKSIIMSKEVENVVIIGAGFIGVELVEAALGLEKKVTLIEFKNQILPHLDKEMAYELENELKKNGASIKCNERVEQLEEINDRQVYVHTDKNQYLADLVLVCIGVRPNTGFLDHTEIKRAKNGAVIITPEMKTNIRDVYAAGDCATVYHQVKKHSNNYIPLGTNANKQGKMTGAIICGEKASFTQALGTSMIKVCNMEGAKTGISEEEAILENFSYKTVTITALNHAPYYPNPQPIKIKLVIDEKTRTILGAQGVGYAGTALRINTFALAIHTKITVDEMGWVDFGYAPPFSAVWDAMHVACNAMK

>CVU95_09880_UniProt_A0A2N2C976
MNGFIIKECECVQFNLPKINIFGEQAIEQLIPEISKKKWASALIVTDKFMRESQAYQRVLKVFSSTKIKFKVFDKTSPDPNIELVEEATEYIKNTDCDFILTLGGGSAHDLGKGVALLSKTNKNIKDFVGINKVDHLVLPIVCINTTSGTGSEVTRFSIISDVNEKVKLAIIDDKLIPTISINDTETLITMPPFLTGTTGMDALTHAIEAYLSTEANTLTDAYAIKAIELISENLIEAYNNGKNIVARECMAQAQYMAGVAFSNASLGYVHAIAHQIGGRYHLPHGLCNAVLLPKIIEGVAKKNSSLRFNNIGKAMNVPMSAYGVISKIETMNSKLNIPNSLSDIGVRKDDIDDIVIKALEDPCRMTSPVQFTQDELVHILVKGLQEV

>CVU95_09885_UniProt_A0A2N2C960
METIRILGVGDPAVYTYVDNWEKFIKPIEKEFDIKIDIQIYSFNEYYEKLMKAIKDDEYDIVMVAGHLWLPFFVEEGYLSPLYDDNNDGKLEDVLKSIKNEMYYKDQQFLYPSFCDGHILVYRKNRLDIQIRDSISILDIVKQLQKQRPNKQFALKSHPSEIFLDILPYFRALKVDFMNDVKMIDSNDLKVEEAIQLYKTAMSFCGLNVETFGNEEVMKSLQSGDVDMAVTWGGQLGAVMGEECVKPEELGFAALKESWNVTWSFGLNANSKNKNLATKVMEKLSEKEVDKEVGRKCGNPTRFSNFLEDEAKYPWYDVTRKMIENAEALPSTPYLPEAMQILTNIVIERLYNKGV

>CVU95_09890_UniProt_A0A2N2C975
MFKKEGAIGILEYSTIPQGIKVMNEIAKRVKITFIKAKIFPGAKYMIIMQGLHGNIEYAMGIGLEHEGLFDIGWIGQIHSHLIPILNDGLYTKKNIENVLVFQQTSHAKAIELCNMLLHKFDLSVIQVKYTEALEGHSVVILAGSIDDVYGAKTHIKCGEVITNIEAWILEEIVG

>CVU95_09895_UniProt_A0A2N2C954
MRIGKVIGNVISTKKHQTLIGCKFMRVELESKEKIVAVDQIGAGIGERVIITEGHNTVYAMNSNTKQPIDAIIIGIVDE

>CVU95_09900_UniProt_A0A2N2C998
MELSEKYIALVTTQVLQLITEQKGYQYAVPIGISNRHVHLKKQDVEILFGQGYILNKLKDLKQIGEYACQETVSLRTEHQGKTFEIKNVRILGPERNATQVEISATDARQLKLNPPVRNSGNLDKSEVITLIGPKGKVTIKNGCIIATRHLHLSKEDAKRMKLKSGDEISVLLGTEKSGRMDHVSCKVDKNYVLELHIDTDDGNAFRVQSGDMATVLLL

>CVU95_09905_UniProt_A0A2N2C982
MGNAIGFIETRGLTAAFEAADNMLKSAEVDLVGMEKIGSGLITVTIQGDVGAVKAATEAGAEAASRLGELIAVHVIPRPHDNMASILPKM

>CVU95_09910_UniProt_A0A2N2C971
MAIGIIEIQNLVNGYLVSDQIMKMVDCRIIHYEKGLGGRLITIVFEGNVSDLNIAIDDIRNMYHETTLLKVAEVIANPPIELMMYFEKGVFQ

>CVU95_09915_UniProt_A0A2N2C9B9
MGSAIGFIETRGLTAALEAADNMLKTAQVELVGTEKIGSGLITVIVKGEVGAVKAATEAGANTASRLGELVAVHVIPRPHDDLIKILPVLK

>CVU95_09920_UniProt_A0A2N2C959
MSSVNNSGNALGMLEVCGYATALIVISEIYQHMNIQVVAISINKPAVAILEKIPLQAQIKFRGSLDQVKAATTLGYNVALRYNEKEDIIQSVIANPHPGIQKLIENSK

>CVU95_09925_UniProt_A0A2N2C986
MQISEIELQQLVSKIVNQTIQKEDSSILDESECISLTDYKDGIFEKMEDAIDAAEKAKQQFSQYTIKDRQRFIESIKKWTLKEKYDLAKRVVEETGLGNYEDKIKKHELAARTPGTELLETKAQSGDTGLAIIEEAPFGVIGATTPVTNPSETVISNTIGMLAAGNTVVFNVHPSSKEVCAYTVSQINKLIVNLGGPKNLITMVKNPTMESLNVMARCPKVNMLVGTGGPGLVKALLSSGKKAIGAGAGNPPVVVDETANIKKAAADIITGHSFDNNTVCILEKEVFVVDKVANELIETMIHEGAYLAEGKTIDALKALITIEDQDGFHVKKEWVGQDPNKYLDALNIPYTQKPKCIICETSFEHPFVQLELLMPILPIVRVDSFRQGVDYAILAEHGNRHTAICHSQNIDNITYYAKAINTTIFVKNAPSLAGIGVDSESVVSFTIAGPTGEGITTAKDYTRKRHCVLVDGFRII

>CVU95_09930_UniProt_A0A2N2C9A4
MPMSIYMNEIKIRNDICDVGQKLYDKGFVAANDGNISVKLDENTILVTPTAVSKGGMKPDDIVKMTLDGEILSAKGKPSSEVKMHIQVYKTNPIIQAVVHAHPPIATAFAVARVPMETPILAEAVVNLGIVPVSDFAMPGTDEVPESIKPYVKDYNAVLLANHGLLTWGRDLREAFFRMESVEHYGKILLYVKQIGDPREFNCTEIDALLDIRKKIGVESGGIPSCKPLYKEDTKNKGKEYCEVELIEAITKEVMKQIKGR

>CVU95_09935_UniProt_A0A2N2C949
MIKTVIPAKLNEEKTKLELIDQTLLPNKEVFLYLDEREKIFEAIKMLRVRGAPAIGVAAAYGLYVCMNKMDTDSLSEFKKEFYETKDYLATSRPTAVNLFWALDRMQNRFEEEENNSLNVIEMKQALLDESEKIFAEDQAMGKAIGEYGLELLKPKMGLLTHCNAGGIATSGIGTALAPMYLGHEKDYDFKVYADETRPLLQGSRLTAYELNKAGIDVTIICDNMASLVMKEGKIDAVLVGCDRIAANGDTANKIGTSGVAILAKEYGIPMYILGPTSTIDMNTKTGNDIEIELRDEEEIGNGFGLRTAPKEVKAYNPAFDVTDAKYITAIITEKGIIRPPYKESLKKLFE

>CVU95_09940_UniProt_A0A2N2C984
MNKYVELNENTVVEYVKSKISFFDEDAVYVCNEIGDGNLNLVFRVKDTKNEKSIIVKQALPYVRAAGENWPLDIRRGEIETHILNIEYELTGGLVPKVYFYDTDMYCMAMEDLDNYIIMRYGLLEFNQYPNFAEQISDFLVKTLLLTSDVVMEHKEKKENVKSFINPQLCEITEDLVYTEPFHIGARNNIEEALQGFHKEEIVDDEELAIEVAKLKYDFMNNAQALLHGDLHTGSIFVNQDSTKVIDPEFAFYGPMAYDVGALIANLIMNYISTKASLDKGELRSKHEKFLLDSIRDVVDMFKAKFLNLWDDAVTDKMAKSKGFKEYYINDVLVNAAGVAGCEMVRRTVGFAHVKDLDGITDNEKRIKAKKENLHLAKILIKNRTEIVNGEEYIRLIEKYL

>CVU95_09945_UniProt_A0A2N2C972
MSKNESKQKIDLFQFFYKYGTILVIVLAVLFFSIRLENFMNFNNITNIFRSVSIVGLIALAITMALTVDGFDLSVGAVAGFASVIAAKIMVIWEMSPVWAITIPLLVGVIVGMVNAFLIIKVGISDMLTTLSMMFLLTGISITFQNGTAIYNYMPLPDNAGIAPGMMHPAYLFIGQGKIFGIPFPVILMLTVVIIVHIFLNYTKYGRYLYMVGGNEEAAKLSGISTKKYRLLAYIFSGFIAALGGLVLGARLGSGEVNAGGSYLMDAVAAAFIGFSVLGIGKANAFGTLLGALLMGVLLNGLIMMDFPYYSQDIVKGIVLIVALGLTYYRKKD

>CVU95_09950_UniProt_A0A2N2C995
MNMIRLEMKGITKSFPGVKALDQVDFSVGNQEIHALIGANGAGKSTLMKILAGAYQGYEGEILIDNEEKTILSPVDAKAHGIVIVYQEVDTALVPHLTVAENIMMDEIISPKQKIMISWKKVKKEARRELEALGLDIDVNRLVSDLSLSQKQMVLIGRAVYQKAKFLILDEPTAPLSIEETRKLFKIVKKLKEDGMSIIFISHRLDEVFQISEKITVLRDGQFIGTYNVEDMTIDKIVEKMLGRKLENTFPKHIGDIGEEVLKVDDFSGTGGIHHVNLRLHKGEIIGLAGLVGGGKTELCKLIFGEGTIAQGKIILNGKEVNNKNPAHAVINGFALVPEERRKEGILVHESIEANLTLPTLNKYCNYSFMDRVKMKNISKENIQKIGIKTPNEKQIVANLSGGNQQKVAIGKWLLSDAQIYIFDEPTKGVDVGSKAEIYSLIGELVKEGKSVIYATCEFSEILGLTDRTYVMYNGTIAKELITKDTDEEELLLYSTGGGQNVQKRV

>CVU95_09955_UniProt_A0A2N2C985
MKKGIAVLLTLIMSFSLVACQEKAEEVSNNTPESTPVVGEEQTGEVANGEIPSAIEGKVLKMALIKEWGTGTHMITHINGVKNEAARYGIELSVIDANNDLAKMAEGIDNAVTNKMDAILLSHGKADALTGAVQKALEAGIPVIVFDNDFDIPEEIHKGKLVSLDQYDLMMGLLSQMALVQELDGKGNVVYNRVANVPPTDKRHRIWEGGILPTYTGLNVINTIDLGTDNPMPKAQTALETLLTTGNDIDAVYAVWDEYAKGFYNALVAEQEASNRTIPLYSVDISDQDLAMMQDHPEIWRASAAVDPTVVGQVQIRLALKALAGEKIPRYYSLKPVLIHVDDLPSKDERRVTMADLAEFYEGWGSTTDFIEDWMLALEQAQ

>CVU95_09960_UniProt_A0A2N2C964
MIPYVRRSKVLEFMHTKDIIFFEEIADQVGVSLATVRRDLKTLEEEGQVEILAGGAAKLTVNIPEKPLAEKMTLNQEEKMQIGSYAATKVGDGQFIFIGPGTTEDMMIKHLAGKNVTVVTNGAFHIQELLKYQINTIILGGEVMLDIGVVIGPTVIKQIAVMNFDKCFIGASGVIPGGSITTSSVEVAEVNKIALKNSAEAYIIADSTKLGKRSRYTFGQLDNDWRLITTSRVDKAYHHDPRFILADI

>CVU95_09970_UniProt_A0A2N2C980
MTSDDNSNSFWFIYKVKEAKHDMAVSHHLLKSLWANEAVFQPLDVRILVKIMLRKVLKMKVKKVHFDDSYKKSILENGDILYTTDYIIKNKNAPFWRRTLVFFLILVVLVVSIVSKIKFDSYEEKQIAFYITAILILVPSFINMLIQFFRPLSIRLSAMSILINGNIATFNFEEFVSGSSHLIEDLVDFLSPKIVDKFQPSISSKSILEEKLIKIELDKVYVISKTDYNHVLGTQLVDYAIFLPVLPRMLVIDFLKLTNAKTIDDKETYVPSIAENFATYD

>CVU95_09975_UniProt_A0A2N2C974
MNRKLSRLGRVSSKLFLKVSRYKTDGDGKIDLEHFRNEVFHKLVVLFIIIGLLPICYGAYLFFRENNIIAGVLELTFYIVILILLLSNRITNLVKRYIFILCVYLLGLMLLLLVGPMGAGLLVIYSTFGLASCILSKRQNIFFIYISLIVFIVISVFLHLGLLDHLAIEIYGESWYIVAISAQSLGTLFVLIINNLFSNIDKQIEEIGKSAKLIAESERSKSILISNLPGMAYKSNYDKDWTMKFVSDGCFKLTGYAPESLINNKDISFNHLITPKYRKLLWNEWKRVLADRTSFKYEYEITAASGERKWVLELGEGVYDEKGQVEMLEGIILDISDRKEIENKLIYTNEHDRWTGLYNRDYLESYLEKDGEQKIKSKRALIVVNLTPLQSLTVNYGFHYIQSLMKKVVETLDAHKTDERTLFKTYENQFTFYQKNYKDTNELADFSTMIANDLKELLITERVGGGIGIIEIDQENELEVDLLLRRLLVASERSISEYNEEFIPCFYNEDLERLIIREEYIRQELVRIITDDVCDGLFLQYQPILDLKTNSVCAFEALARLETEKLGLVSPLEFISIAERTKLIIQLGNIIIINAFNFLNKLSALGYETISISINISTLQLLQPDFTSNLFDLISEMHVNPQNIGIEITESIFASDHDYINNIISKLRDAGLHIAIDDFGTGYSSLAREKELNVNCLKIDKYFIDKLLEDDLDKSITGDIITMAHRLGHCAIAEGVEEEVQKQYLLAHGCDKIQGYLVSRPLDEEVAIEFLEKQERFDSSGCFSDKR

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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