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BMC type: PDU1E


Organism: Veillonella sp. DORA_A_3_16_22. Bacteria; Firmicutes; Negativicutes; Veillonellales; Veillonellaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

  Q620_VSAC01225G0001 (fasta)
          Q620_VSAC01225G0002 (fasta)
                  Q620_VSAC01225G0003 (fasta)
                        Q620_VSAC01225G0004 (fasta)
                             Q620_VSAC01225G0005 (fasta)
                                   Q620_VSAC01225G0006 (fasta) HMM10114PocR_1_pdu1 PDU1E (HMM details)
                                        Q620_VSAC01225G0007 (fasta) Tsp_sunYellow PDU1E (HMM details)
                                                    Q620_VSAC01225G0008 (fasta) HMMpropdeh1_1_pdu PDU1E (HMM details)
                                                         Q620_VSAC01225G0009 (fasta) HMMpropdeh3_1_pdu PDU1E (HMM details)
                                                             Q620_VSAC01225G0010 (fasta) HMMpropdeh2_1_pdu PDU1E (HMM details)
                                                                           Q620_VSAC01225G0011 (fasta) HMM08841dhact_1_pdu PDU1E (HMM details)
                                                                             Q620_VSAC01225G0012 (fasta) HMMpropdeh3_2_pdusml PDU1E (HMM details)
                                                                                     Q620_VSAC01225G0013 (fasta) HMM01923cobtr_1_pdu PDU1E (HMM details)
                                                                                          Q620_VSAC01225G0014 (fasta)
                                                                                            Q620_VSAC01225G0015 (fasta) Hp_euts_fadedPurple PDU1E (HMM details)
                                                                                               Q620_VSAC01225G0016 (fasta) HMM10662PduV_1_mix PDU1E (HMM details)
                                                                                                      Q620_VSAC01225G0017 (fasta)
                                                                                                        Q620_VSAC01225G0018 (fasta) H_fuchsia PDU1E (HMM details)
                                                                                                              Q620_VSAC01225G0019 (fasta) Tsp_sunYellow PDU1E (HMM details)
                                                                                                                 Q620_VSAC01225G0020 (fasta) H_driedBlood PDU1E (HMM details)
                                                                                                                   Q620_VSAC01225G0021 (fasta) H_fuchsia PDU1E (HMM details)
                                                                                                                       Q620_VSAC01225G0022 (fasta) HMMptac_2_mix PDU1E (HMM details)
                                                                                                                             Q620_VSAC01225G0023 (fasta) HMM06723EutJMreB_1_grm PDU1E (HMM details)
                                                                                                                                Q620_VSAC01225G0024 (fasta) HMM15953pduput_2_pdu1c PDU1E (HMM details)
                                                                                                                                  Q620_VSAC01225G0025 (fasta) P_murkyGreen PDU1E (HMM details)
                                                                                                                                             Q620_VSAC01225G0026 (fasta) HMMalddh_1_eutpdugrm PDU1E (HMM details)
                                                                                                                                                     Q620_VSAC01225G0027 (fasta) HMM00465alcdh_3_mix PDU1E (HMM details)
                                                                                                                                                      Q620_VSAC01225G0028 (fasta)
                                                                                                                                                                Q620_VSAC01225G0029 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      2x H_fuchsia
       H_driedBlood

BMC-Hp(map on tree)

       Hp_euts_fadedPurple

BMC-P(map on tree)

       P_murkyGreen

BMC-Tsp(map on tree)

      2x Tsp_sunYellow

(complete list of loci)

Protein sequences:

>Q620_VSAC01225G0001_UniProt_W1W614
NFDHDQPRVIYFMFNPERTRMITVDIDMYH

>Q620_VSAC01225G0002_UniProt_W1W656
MKRIYSYIAALLMLSLMASQVHAKEPVTQSDISGSAKEKCVSSEQTNDKIEADLQRHLERMKSEDIAKGYLREEKTYAEEVSLVRGRLYHSTDKLIHDEKKTTLLSYPVGRKVPCKKSLKDIDSYTDTITRKGMTFRIPKGAELKMFYMLDNNIFIVYEIGDIWYSIQIIPLDVDHPDSKDIENKVLVDKEYNFYHTLQVYWRMWGIFDDLQNPTYSAVWNNGLPGMLVDSYNPDKKSNLLFAAYDGRYAVFNQLVYNPSTSPFTHEQLRNTIEYFDSNNNPEYKAKKHRLFPDERIIRIYEY

>Q620_VSAC01225G0003_UniProt_W1WBD0
MKDKSVLPIEEQLNRFLQPKCLIPGGLGLWEDYFRKICTAWGEISGEIRPQHIIFSADNGCNMEGYVGYNYEVTQKQSRNMLLGRSSATQFCNFNNIPYEVVDVGIASDDGIGVDRKVAKGTKNILNHPAMTEDEFNSAFQAGYERVEHYVKQGINLFSFGEMGLGNTTTSACVLSALIGADPTETVGPGSWPNKPDLMKRKIDFVRAVLDKHKASIVSDSEVERVRKIVAHVGGFDIAAILGAMLACVEFKKPFVIDGFITAVAAACAVHMNVRITDYALPSHHSREKGTELALAEVDITQDMVPIQAYMSMGEGTGAILMVQMLKTTQHMFVNVGTFADLMKL

>Q620_VSAC01225G0004_UniProt_W1W9D1
MKINKYFDIHFERADDATIAKRLIGGAKIKGPALVTLILSIFIASIGLNMNSTAVVIGAMLISPLMGPILATGFGFATLNFTVVKSGILRLSLQVTIAVLASALYFYISPVQAATSELLARTEPNIFDVFIAIFGGLAGIIGQTRKTLDNVIPGVAIATALMPPLCTAGYGLANGNWQYFIGAGYLFFINAFFIFFAAFIVLKGVYSLPFHKQAEEVNRRNQLIFLVIGLIMAIPSIYAGYDMTIKYSEFLSQIIWSSLLRMILIKRDVDK

>Q620_VSAC01225G0005_UniProt_W1W6Q7
MKVAANPVPHAEILNQIKPLLAKEGVDLQVVEFTDYIQPNMALSSKEVDANFFANVPYQNNFNKDHGTNFVSFAPVHIEPLAIYSKKIKDLKDLPNGAKVAIPSDPTNSARALLLLQSAGLVTLKDPTGLTNTPFDVTSNPKNIQITELEAAQIPRSIEDLDAAVINANYALPAGLNPTKDGLFVEKADSPYANLLSVNPGDENKPAIQKLAKALQSPEVKKFIEEHYKGAIIPAF

>Q620_VSAC01225G0006_UniProt_W1W620
MICTKEDAKVINEIMRDFTNITKLAASFVNNRGKMLSQEYNSSTFCKLVRRNPAYAKRCNQCHLYGGLEATKELLSMPYRCHMGLIDFSVPVMKDDAILGFIMAGQTKTEDTTIKPILPTQTDWHEDTRLRALYQALPVLTAEQIYSATKVLRILVEHYFPFNDSVAEELPYEQLPDFVESERPINRPEIRKAMLYIEKNLSKRVSLRRISEHIHLSESYFSKIFKDDTGLSVVQYITLLRMQEAKKLLVYSQLTINQISKTLGYNRTSYFCKIFKMATTETPHSYRKKYAKPIDA

>Q620_VSAC01225G0007_UniProt_W1W661
MVTTCGLTEFVGTSKTGDTIGLVIANVDQQVLDAMQLKKKYRSIGILGARTGAGPHIMAADEAVKATNTEIVSIELPRDTKGGAGHGSLIIFGGDDVSDVKRAIEVALAEVERTFGDVYANDAGHLELQYTARASHAVNAAFGAPEGKAFGLIVGAPAAIGVVMADVAVKSANVDVIGYASPSAGTSNSNEVILQISGDSGAVRQAVISAREVGKKLLGTMGDEPVNGAPSYI

>Q620_VSAC01225G0008_UniProt_W1WBD4
MKSKRFEVLSQRPVNQDGYVKEWVEEGFIAMESPQDPKPSLKIEGGRIVELDGKRREDFDLIDTFIANYGIVLDGAQQAMAMDSKEIANMMLTPSVPREEIVKICKSITPAKMLEVVSCMNVVEMMQCMQKMRARRTMANQAHVTNVNDNPVQIAADAAEGALRGFAEEETTVAVARYAPLNAISLLVGSQCGRPGVLTQCSLEEATELELGMRGFTAYAETISVYGTEDVFTDGDDTPWSKGFLASAYASRGLKMRFTSGTGSEVQMGQAEGKSMLYLEIRCLYITKGAGVQGIQNGSVSCIGIPAAVPSGIRAVLAENLVAAMLDLECASSNDQTFSHSDLRRTARTLMQFAPGTDFICSGYSSTPNYDNMFAGSNWDAEDFDDWTVIQRDLKVNGGLIPAREEEVVAVRNKAARALQALFKALGLPPITDQEVEAATYANGSKDMPPRDKVADIKAAQDLLNRGVTGVDFVKGLAKEGHQDVAQSILNLLKQKISGDYLQTSAIFDRDFNVISAINNKNDYQGAGTGYRVEGEDWERIKNIPNAIDPRDI

>Q620_VSAC01225G0009_UniProt_W1W9D5
MMAEINKDVLRSIILDVLQEMGGVHEAPQFKASVGESTTSSAAPRHEDPTGDDSWLQTGGPAQPGTSADEVVIAVGPAFGRSQRQTIVGVPHQEVIRQLVAGIEEEGLKARVIRVYRSSDVAAVAVEGDSISGSGVCIGIQSKGTTLIHQRDLQPLSNLELFPQAPLLTAETYRAIGKNAAKYAKGESPTPVPTMNDQMARPKYQALSALLHIKETKHVVKGKPADEVRVTV

>Q620_VSAC01225G0010_UniProt_W1W6R2
MANELEALIQQIVSEIDGAKGSATQYSAPHTSSTPNTAVVDRVVTIEDYPISKKHPEWIDLGQGRDLSHITMDNVMAGHITMDDLKISPSILKAQGQIAKAGGRDQIELNFSRAAEMTKVSDKRLLEMYNALRPYRSSKQELLDIASELDGLGAPICANFVREAAENYERRKKLKGDN

>Q620_VSAC01225G0011_UniProt_W1W624
MKRIVGIDIGNSTTEAALAEIHSNGEVKFLSSAIASTTGIKGTRENIVGLMDSLKSLIRSANLTLRDIDLVRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGLGLGVGYTVPIEQLIDKPQGQPYIVVAPKIIDFELVAQLINAYCKRGYDIRAAILQADDGVLVNNRLDHKIPIVDEVAYIDKIPMGMLSAVEVVEPGQVVSQLSNPYGIATVFELSPEETKNIVPIARALIGNRSAVVIKTPAGDVKERVIPAGSIIVMGNDRTVSVDVSAGAERIMETLESVHPIDDISGEAGTNVGGMLEKVRLTMAQLTNKSPQDVFIQDLLAVDVAVPINVKGGLAGEFSMEQAVGIASMVKSDHLQMEIIAKQVEKELGVPVEIGGEEAESAILGALTTPGTAKPMAILDLGAGSTDASIINQEGKIKAIHLAGAGNMVTMLINSELGLEDMHIAEAIKRDPLAQVLSVYHIRHEDGTVQFFNEPLSAALFGRVVIVTPDGLVPVERDIPLEKIKRVRQTAKKRVFVTNSLRALASVSPTHNVRDIPFVVIVGGSALDFEIPQLVTDALSQYALVAGRGNIRGVEGARNAVATGLVLSYAQKGGL

>Q620_VSAC01225G0012_UniProt_W1W665
MDQSIVSKPTILLYATEHISEDILKPVLYGIEEEGLPVVIESHSGTHMTLADLASRNSALSVGIGVDDEAIVLTYKNLPMHQFIYRLTGYAQYPDSLRTLGVNAARLVKGNPFVSDERLEVAF

>Q620_VSAC01225G0013_UniProt_W1WBD9
MAIYTKTGDAGTTALFDGTRVPKNSLRVDTYGTFDELNAQVSVCEKLVVSPDNKHVLHTLQHQLFRLCAEVATPHVENLSESSNLISQQDISELEYMIDDYTNRLPQQHSFILSGNYLSAAELHVARTICRRGERLLISLGSVEPIRDEVRKFINRLSDALYIMARMEDYIQFVETIVERVSERVATSRVEILTESNQCVSNIEHTAESGVIDMTTGSELEHIMTKLSQAAMDYAQSIGVPIVVSIVDANGILMYFQRMSDALLISNDIAQAKAYTAVALKSATHEIHPSAQPDGDLFNIESMVNRKICTFGGGYPIIIDGEIVGGFGISGGTVAEDMDIASHALQSLLTQ

>Q620_VSAC01225G0014_UniProt_W1W9E0
MDVTQMYISEFVGTAVLLAFGNSTNASILLKKTIVGIYGTNWLHIIFGWAFAVTFAVYIGITLGGPGHLNPAVTFALAVAGIFPWEQVIPMSIAQIAGAFVGATIAAVFYYPHFKETGPDEGNCVGIFATGPAIDHKPCNLMSEIIATFMLILATLCLGKMADGLAPVVSGILIASIGMSFGATTGYALNPARDFGARLAYTILPIPNKGTANWQYAWVPFIGPLIGAGLAVVFFKLVAP

>Q620_VSAC01225G0015_UniProt_W1W6R8
MAFQEVIDAKQRIIQEFVPGKQVTIAHVIANPKPDLFRKMGLEEKGRNAIGILTITPGEGTIIAADIASKSGDIEIGFIDRFSGALLITGDVSAVESALQSVIEGLQRILGFFPTDLTRS

>Q620_VSAC01225G0016_UniProt_W1W630
MSTEKKEKRILLVGRSGCGKTTLADTITHGSATYHKTQAITRVGNFIDTPGEYMENPNYYRGIILHAYDADIVIFMIPAGDETTIFPPSFGNSLNREVIGVVSKVDTGKDVEAPRRNLKLAGATKIFEISVHDQESLDRLCDYIYS

>Q620_VSAC01225G0017_UniProt_W1W672
MDRGFEEQLNQFILNKAIIPKSLGLWERYFKKMCLAWQDMKPEIQAQHIIFSADNGISVDGLIGYNYEITRKQSQNMIDGKSAVANYCIFNHIPYEVVDVGIACPQGIGINRKVAQGTKNILDGAAMSAEEFDLAYQAGYNRVVYYAESGINLFSFGEMGVGNTTTSAAVLSGLTKLDPRITVGPGSGPDEEAYMNQKREFVRTALSHHKGHLNSPKEVISRVGGFDIAAITGAMVACTDLHIPFVIDGYITAVAMACATQMNGDAPLYGIPSHYSREVGMAAALAYANIRLDEVPIHGQMALGEGTGAVLMVQLLKTAHFAFMNIGTMVELLEK

>Q620_VSAC01225G0018_UniProt_W1WBE6
MTQEALGMVETKGLVGAIEAADAMLKAANVELVGNEKIGSGLVTVMVRGDVGAVKAAVDAGAAAAERVGVVISTHVIPRPHKDVEGILPTKGE

>Q620_VSAC01225G0019_UniProt_W1W9E5
MADTKSMVDEILKRVLMRIDSADLSKTSGATSNASCASAPVSSPAVSQLQTSMITEHVGSTTTGDTIGLVIANVDSQVLEAMKLTKSYRSIGILGSRTGAGPQIMAADEAVKATNTEIVSIELARDMKGGAGSGSLIIFGGDDVSDVRRSVEVGLRELERTFGEVYMNEAGHVEIQYTARAGEALVTAFGTPEGKAFGLLVGAPAAIGVVMADTAVKSANVDVVDYQSPSSSDMSNEVVLLISGDSGAVKQAVKAARDVGLALLETMGERPKNKGNAYII

>Q620_VSAC01225G0020_UniProt_W1W6S3
MVKDSLGLLEVAGLLGAITASDAMVKAANVRLIGIEKARGLGWMTVKVTGDVAAVEAAVQTGVAITKGMNLYVAHKVIPRPAEGLVESFNDDFTDKPAKVADETEKPQLDEKVVEVLDEIVSTIMEPKSSKSTGTKKITPKKNTKKK

>Q620_VSAC01225G0021_UniProt_W1W633
MNNALGMVETKGLVGAIEAADAMVKAANVTLEGTEKIGSGFVTVMVRGDVGAVKAAVDAGCAAAQKVGEVVSTHVIPRPHSDVELILPKKG

>Q620_VSAC01225G0022_UniProt_W1W679
MDREQIRAIVREVIEAMFESSIPVGVSNRHVHLCQEDWDILFPDQAITKKSDLKQTGEFASEQTVTLVGPKGVIQNVRVLGPLRKQSQVEVSLTDARALGIKPPIVLSGHLESAVEITLCTENGEITKPICIVAKRHIHMSPDDAKRLNVNDGDSVNVELQTPERTTVFGDVIVRAVPGFILELHIDTDEANAANVQGTVMARIVQ

>Q620_VSAC01225G0023_UniProt_W1WBF0
MKGLKKANNTLQEFSDLVESKQVSSHNQKNLRVGIDLGTSSIVLSVVNDKGKPIYGAFEYNESIRDGLVVDYVGAVTITRELKAKAEAALGTELVYAAAAVPPGTIGKNKEVVGHVLESAGFEVTCILDEPTAAANVLGITDGAVIDVGGGTTGISILKDGRVVYTVDEPTGGTHMNLVISGAYGISIPEAEAYKRNEANKRDVYATIRPVVEKMAAISKRALQEGGYEKGTPIVVVGGASNFEEFTKTFSQYIGLPVDKPLYPEFVTPLGIAMGSEH

>Q620_VSAC01225G0024_UniProt_W1W9F1
MDALVKLVLERLEKRMTSTATFMVTECNSYDEHILLQNQLISFAGIDYGHLRELMCDTLVPWVAYLHRALAYDCEVTIHLAVPVTSLMNPSVILDWPIKFLDKFGRPIYASHQAWITTSFVRSCESQSIIVIYRGQRFTMAARDEIERLGITIIEGNEKYASR

>Q620_VSAC01225G0025_UniProt_W1W6S8
MQVGKVVGSIVSTQKHESLKGMKLMMVDILDGEQELTGRIEIAVDTVCAGEGEYVLLTRGSSARHIFEDDKGTAVDCAIVGIIDSFEK

>Q620_VSAC01225G0026_UniProt_W1W639
MENNTQLKEMIRSMVIDILQGQKQEMASSQPIKQAPRGQVEPGVFDTVDEAIQAAKAAQARFEDCTLATREKVIADIRAAMRPRVQELAQKTVDETGMGRVADKVLKLNLTLNKTPGVEDLVTECETGDNGMTLYELSAYGVIGAITPSTNPAETLICNSIGMLAAGNAIFFSVHPGAKNLSRELVSELNQVIAKSIGIENLIVTLREPSIESAQEMMLHPDVSLLVVTGGPGVVKQALQSGKKVIGAGAGNPPAFVDETADIKKAAQDIVLGASLDNNILCIAEKSVVAMRQIEPQLVQEMVKAGCILVENQQDIQRLVDLTVLPNGTPNKKFVGKNASVILDAAHIPYNGDPRLIIMRTPKNHPFAVIEMLMPILPVVTVDSFDEGLDVCLMLEAGLHHTATMHSLNMERLNRMARKMKTSIFVKNGPSYAGLGFSGEGTTTFTIATPTGESTTSARCFARRRRCCLTTGFNIR

>Q620_VSAC01225G0027_UniProt_W1W683
MNKWTFPTQIYAGTDSLNRLTAFSNESILIICDPFLKDSPSLTYVMGLMDSKNKVTIYTDVVPDPPITHVVKGIEFMEGIKPTVIIAIGGGSCIDMSKGIAYFGRKLKHMDIKSFIAVPTTSGTGSEVTSFAVLTDSETQIKYPLMDDAVSPDEALLTPLFVKTSPPNVTAFSGMDVLVHALEAYVATAANNFTDALAQQAIELVFEYLPKCYKPTATDRDRMSMHEASCLAGLSFNKAGVGLVHAMAHQLGGQFHVPHGLANSMLLLYVIGFNCSRNQEVAKKYAHLSAKLGFASHKASDGDKLGALLEAIVKLQRTLECPMTLTEFGVDKATSEPKLNLMADRALEDMCYRFNPYPANHDDLIGLYKKIL

>Q620_VSAC01225G0028_UniProt_W1WBF4
MMILSDYIKKFCNLYRVNNKTQKYIMNNTNTRGFNDFMEASFCMPLFLLIEIEIEIIFTYLLLKLCAIRYTFFHLRMI

>Q620_VSAC01225G0029_UniProt_W1W9F6
MQHMLRMGIDVGSTTVKVVLLDEHDNYLYKKYIRHYANILDTVYTLLQEAQVGHENDQVHVCITGSGGMAMAEKVRIPFVQEVIAETRAVKALYPETDVIIELGGEDAKVTYLGQTAEHRMNGSCAGGTGAFIDQMATLLQTDASGLNQLAMNADTIYPIAARCGVFAKTDVQALLNQGASHENIAKSVFQAIVNQTIAGLACGHKIEGNVAFLGGPLTFLSELRQCFCDTLELDEAHRIIPENGELFIALGAALMKEDCREITVGQLTKEIGALIGIPMEATDRVEPLFKNEQELEEFRARHAKAVTPKANIEDAQGPCYLGIDAGSTTLKVVLINSNKEIIFSHYGPNHGKPLEKSREMIEKIYELLPKGAYIAHSGVTGYGEAFLKRALGIDIGEVETMAHYRAARYFCPDVSFILDIGGQDMKCCKV

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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