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BMC type: PDU1E


Organism: Listeria monocytogenes. Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

     CDR86_11475 (fasta)
             CDR86_11480 (fasta) HMM10114PocR_1_pdu1 PDU1E (HMM details)
               CDR86_11485 (fasta) H_robinEggBlue PDU1E (HMM details)
                     CDR86_11490 (fasta) Tsp_sunYellow PDU1E (HMM details)
                                   CDR86_11495 (fasta) HMMpropdeh1_1_pdu PDU1E (HMM details)
                                        CDR86_11500 (fasta) HMMpropdeh3_1_pdu PDU1E (HMM details)
                                            CDR86_11505 (fasta) HMMpropdeh2_1_pdu PDU1E (HMM details)
                                                           CDR86_11510 (fasta) HMM08841dhact_1_pdu PDU1E (HMM details)
                                                             CDR86_11515 (fasta) HMMpropdeh3_2_pdusml PDU1E (HMM details)
                                                                CDR86_11520 (fasta) H_driedBlood PDU1E (HMM details)
                                                                  CDR86_11525 (fasta) H_robinEggBlue PDU1E (HMM details)
                                                                       CDR86_11530 (fasta) HMMptac_2_mix PDU1E (HMM details)
                                                                              CDR86_11535 (fasta) HMM06723EutJMreB_1_grm PDU1E (HMM details)
                                                                                  CDR86_11540 (fasta) HMM15953pduput_2_pdu1c PDU1E (HMM details)
                                                                                    CDR86_11545 (fasta) P_murkyGreen PDU1E (HMM details)
                                                                                            CDR86_11550 (fasta) HMM01923cobtr_1_pdu PDU1E (HMM details)
                                                                                                        CDR86_11555 (fasta) HMMalddh_1_eutpdugrm PDU1E (HMM details)
                                                                                                                 CDR86_11560 (fasta) HMM00465alcdh_3_mix GRM3A (HMM details)
                                                                                                                       CDR86_11565 (fasta)
                                                                                                                                 CDR86_11570 (fasta) HMMacetkin_1 PDU1E (HMM details)
                                                                                                                                          CDR86_11575 (fasta) HMMreg00392_2_grm2 EUT2A (HMM details)
                                                                                                                                                 CDR86_11580 (fasta) HMM00288_1_pdu PDU1AB (HMM details)
                                                                                                                                                   CDR86_11585 (fasta)
                                                                                                                                                            CDR86_11590 (fasta) HMM00465alcdh_3_mix EUT2A (HMM details)
                                                                                                                                                                CDR86_11595 (fasta) HMMreg00072_1_eut2 EUT2I (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_driedBlood
      2x H_robinEggBlue

BMC-P(map on tree)

       P_murkyGreen

BMC-Tsp(map on tree)

       Tsp_sunYellow

(complete list of loci)

Protein sequences:

>CDR86_11475_UniProt_A0A1D2IT42
MQLIFARHGETDWNVAKKYCGQLDVPLNEHGVQQMKHLREKLEDYSFDLVVTSDLMRVKQSANILSNAKTVRFPALNEMNFGDFEGYTYQEISTKFPKAWNEYCNNWQTALFPNGESFPIFYERVVEVLEVEMEKWQQIDTVLLVGHLGVLRVIALFLQKQTIAQYWDIDFKQGCYSLWDNKSQRFLISNQ

>CDR86_11480_UniProt_A0A1C7PZ58
MLLQSKSNEMLIEKVMDEFSAATSLASVVVDIHGTEVSRLCNFTPFCQLIRSNPKYRSLCQKCDMFGGLEASKTGKPLIYRCHAGLTDFSVPIVVENQLSGFLLSGQVICEESSEVGNIQTEETDWKNDKDLISAFRSVPVFSSKKINSSAEMLTIISQYYLKSEMEKSREEQKQKIVFHHTKVAHHEENKEIRKALKYIEKNLNRPITLDEVASHVYLSSYYFSKLFKKEMNVNFINYVNQKKMSLAKEMLKNPRLSIDNIARNLGFTQTSYFCKVFRKEFDVTPKGYRETFK

>CDR86_11485_UniProt_A0A1C7PZ72
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAAKNVGTVMSTHVIPRPHTDVEEILPVRVKSDE

>CDR86_11490_UniProt_A0A1C7PZ37
MSEQNKLIDEILKQVMETVNDAPEKLVEDGGSRQMSEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKGGAGHGSLIIFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAGHIELQYTARASHALEKAFGAPVGKAFGLMVGAPAGIGVVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI

>CDR86_11495_UniProt_A0A1D2ISK6
MKSKRFEELAKRPVNQDGFVKEWIEEGLIAMESPNDPKPSIKIENGKVVEMDSKKLADFDLIDHFIAKYGVDLSRAEEVMQMDSVKLANMLCDPNVPREKIVLLTTAMTPAKIVEVVSQMNVVEMMMSMQKMRSRRTPTTQAHVTNLRDNPVQIAADAAEAAIRGFDEQETTVAVVRYAPFNALSLLVGSQTGRGGVLTQCSLEEATELELGMRGLTCYAETISVYGTEPVFTDGDDTPWSKGILASAYASRGLKMRFTSGTGSEVQMGYAEGKSMLYLESRCIFITKAAGVQGLQNGSISCIGIPGAVPSGIRAVLAENLIAVMLDLEVASGNDQTFSHSDIRRTARLLMQFLPGTDYISSGYSATPNYDNMFAGSNFDADDFDDYNILQRDLKVDGGLTPVTEEEVVAVRNKAARVIQAVFDKLGLPEVTDAEVEAATYARGSKDMPERNMVEDIKAAAEMMDRGVTGLDVVKALSAGGFDDVAESVLNMLKQRVSGDFLHTSAIIDKDWNVISSVNDLNDYAGPGTGYRLEGERWEKLKDIAVAVDANELD

>CDR86_11500_UniProt_A0A1D2IWB3
MVEINEKVLRGIISEVLDELQLKEDKVSFQKEQPSVAVSDESFLTEVGDAEPGRQKDEVVIAVAPAFGKYQTKNIVGVPHKQILRELIAGIEEEGLKARVVRVFRSSDVAFVAVEGDKLSGSGICIGIQSRGTALIHQKDLQPLSNLELFPQAPLITLETYRAIGKNAAKYAKGESPNPVPMVNDQMARPKFQAKAALLHIKETKHVVQGKNAVELQVN

>CDR86_11505_UniProt_A0A1C7PZ94
MNQEALENMVRNILQEVNSGGVSTTTSQKVSGDTLTVRDYPLGTKRPELVKTSTSKSLDDITLKSVLDGTIKPEDVRVTAETLKMQAQVARDAGRATLANNFERAAELTIVPDERILEIYNAMRPYRSSREELLAIADELESVYHATICSNYVREAAQLYQERKKLKGDN

>CDR86_11510_UniProt_A0A1D2ISW6
MKYIAGIDIGNSTTEVALAMANSSKEAAFVASAITDTTGIKGTKQNLHGIFKALRLALEKVNATTEDLAEIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGLGMGSGVTVLLDDVTSKSKDADYIVIIPKTVDFEDAAKQINTYVENGYQITAAILQADDGVLVHNRLNHKIPIVDEVGFIDKVPVDMLAAVEVAAPGKVIETISNPYGIATVFHLNSDETKNIIPVARALIGNRSAVVIKTPEGDVKARTIPAGHIELQSGSRTQRVNVAEGSEKIMQAIMSLPKLDNASGEPGTNIGGMLEKVRQTMAGLTDKLPADIFIQDLLAVDTFVPVDVQGGLAGEFSMEQAVGIASMVKSDHLQMAAIASEIEQELQVSVKIGGAEAEAAILGALTTPGTNTPLAILDLGAGSTDASIINGKGEIIATHLAGAGDMVTMIIQSEIGLEDRYLAEDIKKYPLAKVESIFHIRHEDGTVQFFDTPLSPTVFAKVVIVKPDGFVPIPGDVSIEKIKLIRRSAKERVFVTNTIRALKYVSPTGNIRDIPFVVIVGGSALDFEIPQLITDALSHYSLVAGRGNIRGKEGPRNAVATGLILAGGAKA

>CDR86_11515_UniProt_A0A1D2ISS2
MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMPLKDEVQAAFRASASSPLLVGVTLKNDHLVIHYRNLPPDKPLFSAHRFCATTLENQRNMGMNAARLVKGVPFK

>CDR86_11520_UniProt_A0A1D2IX33
MHQAIGIIEIKGLASAIAVADTMAKVANIQLVDTEKAKGFGWITVKVEGDVAAVNAALEAGEQTAIASDSFIAKKVIPRPGEEIFTVFWPKEEIEPEKPEVMVETEKVEETEAPTEATCNLCHDPLCPRVKGDPRQDCIHFEEEK

>CDR86_11525_UniProt_A0A1D2IWK0
MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPHNDVETLLQKGL

>CDR86_11530_UniProt_A0A1C7PZ66
MEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTNFAKIIKS

>CDR86_11535_UniProt_A0A1D2IST2
MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDENNVPLFGAFEFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAIPPGTVGNNKKVVANVIESAGMEALYTIDEPTAAAAVLDLQNGAVVDVGGGTTGISVFENGEVIYTADEPTGGTHMTLVLAGYYGVPVEEAEQNKRAQKDSSEHFSVMRPVVEKMAEITRVHLEKSPSEPLYIVGGASAYSQFKDTFESYLKMPVFQPNYPQYVTPLGIAMSSGSENL

>CDR86_11540_UniProt_A0A1D2IWI5
MIEKLVEIIVQRMKLRATSKTSIAISKLPRDPVAIFMESGTVRLTQVNKHFLERILGGNRAESLTVWFEKAADYGVTIELELYDNGEPWLDYTMLSQLNYPVFTSNGERLFHASNQVVCYGDSAVIPSGSTLCKYKKQLITPLANEYLTKNNIAVRERQ

>CDR86_11545_UniProt_A0A2A6A1A1
MFMAKITGSVVSTKKEDSLTGKKLMIVQPVDANGEHVRSEEVACDSVGAGIGEYVLVARGNAARSVFAEPNSAIDSAIIAIVDSFDK

>CDR86_11550_UniProt_A0A1D2IWA3
MSIYTKTGDKGTTALFDGNRVKKYDDRVETYGSFDELNAEISVAEKFVTSAENKSLLRNVERQLFYVCAELATEHEASLASKIIITENDINQLEKVIDDYTAKLPKVDSFVLPGSSTAGAFLHSARTVARRGERLLVRLSEQTDIRKELLKFVNRLSDFLYILAREEDFRQMLDKATKLIVAKYLEQTGQEKSVTSDLSFSFCEKLMHQVCIVSEEIGVPVTLAIVDAHGNARFNYRMEHALLVSAELATKKAYSAVAMKTSTEKLTEAVQPGAPLYQLETLTNGDIVTFGGGVPIYGKDGAIIGGMGISGGSVEEDIHIAKKALSMIEKG

>CDR86_11555_UniProt_A0A1D2ISK9
MESLELEKLVKKVLLEKLAEQKGIPVKTMTKGAKSGVFDTVDEAVQAAVIAQNSYKEKSLEERRNVVKAIREALYPEIESIAARAVAETGMGNVADKILKNTLAIEKTPGVEDLYTEVATGDNGMTLYELSPYGVIGAVAPSTNPTETLICNTIGMLAAGNAVFYSPHPGAKNISLWLIEKLNTIVRESCGVDNLVVTVEKPSIQAAQEMMNHPKVPLLVITGGPGVVLQAMQSGKKVIGAGAGNPPSIVDETANIEKAAADIVDGASFDHNILCIAEKSVVAVDSIADFLMFQMEKNGALHVTNPSDIQKLEKVAVTDKGVTNKKLVGKSASEILKEAGIACDFSPRLIIVETEKTHPFATVELLMPIVPVVRVPNFEEALEVAIELEQGLHHTATMHSQNISRLNKAARDMQTSIFVKNGPSFAGLGFRGEGSTTFTIATPTGEGTTTARHFARRRRCVLTDGFSIR

>CDR86_11560_UniProt_A0A1D2ISV6
MNSFQIKTKVAFGTNSLQVLKEIKNKNVWIICDRFLADGEGLQGLIGQLDASNNVHIFTDVVPDPPISKVAGGVSEAGKIQPQVMIAFGGGSAIDTAKGIYYFAKRLEKINISTFIAIPTTSGTGSEVTAATVITDPTTKIKYPLFLDELIPDMAILDAQLVVTVPPAITANTGMDVLTHAIEAYVSKDASDYTDALGEKSVQLTLRFLTSCYDDGRNLADREKMHNASTMAGMAFNCANLGLNHSIAHQLGAQFHVPHGLANAILLDAVIRFNAFKNRETEQKYAEMARICGIASRSDSNETAVRLLRERIVAMMEHMQMPRTLTDAGVAKEKVYAKMDEIATNALKDACLPTSPTTPTHQELKEILEQII

>CDR86_11565_UniProt_S5LBW7
MSAYLAEFIGTMVLIMFGNGLLAGLTLNKSLSQGANWVVVTFGWGFAVMIGIYVAGAYSGAHLNPAVTIALAVGGSFPWADVVPYIIAQIAGAFVGASIVILHYYPHFKATPPEIDTHGIFSTGPAIRNTPFNLISEIIATFAFIFGLLMIGANSFTDGLNPLILGFLVVAIGMSFGPTTGYAINPARDLGPRLAYFLLPVPNKSGSDWRYAWIPIVGPIIGGLLAIGLFNILL

>CDR86_11570_UniProt_A0A1D2IX23
MHKIMAINAGSSSLKFQIFTMPGEEVLVKGLIERIGLPDAIFNMSFQNEKIKETRAINDHGKAVEILLEQLKAHQVINDLSEITGVGHRVAHGGEDFVTSCVVTDEVVKGIEAVTNLAPLHNPANIIGIKTFRELLPNAVSVAVFDTAFHQTIPQENFLYALPYELYEKHHIRKYGFHGTSHKYVAGKAAEVLEKPLEKLKIISCHLGNGASVCAIEAGKSVNTSMGFTPNAGLMMGTRSGTIDATIIPYLVDELGYSLDEVMHMMSNESGVLGVSGISSDFRDIEIAAKEGNSRALLTLRMFTGQICNYIGAYASAMNGCDALLFTAGVGENSPLIRQMVTEQLSYLGVTCHVTKNNAGDMIISNDNEAVKVCIIPTNEELMIARDVEKYAKQTIG

>CDR86_11575_UniProt_A0A1D2IWJ1
MKITTASHGGNYNELAKQHGLTKEMVLDFSANINPLGVPASLKQTITANLDKLVEYPEPDYLALRARIASFHQLDLANVIPGNGATELIFGIAKVTKAQKVLLLAPTFAEYERAFFDAEIVYAELTKETNFAAVEIVLEILERDTEIEAVCLCNPNNPTGQLIAQQEMIKIADLCEKRNIYLIIDEAFMDFLEENETISMINNLERFPHVAIIRAFTKFFAIPGLRLGYLLTKNDLLAEALMQMREPWSINTFADLAGQMLLEDEAYIRQTFDWINEERDFLYRGLSRFSALTVYRPTVNYIFFHLEKPLDLRKELLLKGIFIRSCANYRGLTENYYRVAVKSRADNSQLLTALEVIFSGN

>CDR86_11580_UniProt_A0A1D2ISR3
MEIKTRCPASCGELLQGWILGGEKLISYPINWYSEVTLSDKVGLNSSGHTKAWLAFQVTCEYFGVAKRDLPQVSLQVKSTIPVAKGMASSTADIAATIGATAKWLNKSITEIEIVKLCLKLEPTDSTIFESLTLFDHLKGDVIQNFNWIPKLGVVVLEPLTVLETATYRQENHQAQLLKNEGQLAKAMDYFQQAVTQKSIRLLGEAASISAACNQTILPKPFWKEILEVTENLDLVGLNVSHSGTVVGILYELEKTDPLEILFELERRYVTTFYSRYYFREFVSGGVQIIS

>CDR86_11585_UniProt_A0A228FIK2
MHRFVLWWAMIFSTTKRVIQGMYLHCLFTKKDLTFPRVWFLIKWTNKIFYGTKAYCLLSKEALSWKRKFLYSKLLFLF

>CDR86_11590_UniProt_A0A1D2ISS1
MQKVSFKTDLYIGQGATDRLLDFKDKQIFIVTDPFMVSSGMINAITDKIDQSNTYTIFSEIIPDPPIENVVAGIEVLNECDANLMIAIGGGSAIDAAKAMKFFGQKLGTVRAMPFIVIPTTSGTGSEVTSFSVITNKEKAIKYPLITDAILPDEAILDADLVKSVPPAITADTGMDVLTHALEAYVSTKANDYSDAMAEKVIQLVFTYLERAYKDGNDLEAREKMHNASCLAGMAFNITSLGLNHGIAHTAGAKFKIPHGRMNTLLLPHVISYNAGITSDFGNNPDNRAAERYTAIAKLLKMPASNTRLGVRSLINAIKQLQKKLNMPTTLTECGISRTDLNENIAQIAEGALNDGCTATNPRTPTETDVSAILEKMLA

>CDR86_11595_UniProt_A0A1S7FLT9
MTGMNGRIVIADDEPITRMDIRDILEEANYNVVGEATDGFEAIELCKSHQPDLVIMDIQMPLLDGLKAGKRIISEGLAGGIILLTAFSDPKNTEKAKGFGALGYLVKPLDEKSLIPTVEMSIAKGRETRKLEQQLEKLTKKLEERKVIEKAKGVLMIENNITEEEAYNMIRNLSMDKRCPMMEIAETIVMSDD

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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