BMC type: PDU1C


Organism: Lactobacillus siliginis. Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

           LSI01_01490 (fasta)
                  LSI01_01500 (fasta) HMMreg00356_1_pdu1d GRM3B (HMM details)
                       LSI01_01510 (fasta)
                            LSI01_01520 (fasta)
                               LSI01_01530 (fasta) HMM10662PduV_1_mix PDU1C (HMM details)
                                  LSI01_01540 (fasta) HMM01923cobtr_4_eut2 PDU1C (HMM details)
                                    LSI01_01550 (fasta) Hp_euts_iceBlue PDU1C (HMM details)
                                            LSI01_01560 (fasta) HMMacetkin_1 PDU1C (HMM details)
                                                 LSI01_01570 (fasta)
                                                         LSI01_01580 (fasta) HMM00465alcdh_3_mix PDU1C (HMM details)
                                                                   LSI01_01590 (fasta) HMMalddh_1_eutpdugrm PDU1C (HMM details)
                                                                      LSI01_01600 (fasta) HMM03928Haemd_3_pdu PDU1C (HMM details)
                                                                          LSI01_01610 (fasta) HMM01923cobtr_4_eut2 PDU1C (HMM details)
                                                                            LSI01_01620 (fasta) P_murkyGreen PDU1C (HMM details)
                                                                               LSI01_01630 (fasta) HMM15953pduput_2_pdu1c PDU1C (HMM details)
                                                                                     LSI01_01640 (fasta) HMM06723EutJMreB_1_grm PDU1C (HMM details)
                                                                                         LSI01_01650 (fasta) HMMptac_2_mix PDU1C (HMM details)
                                                                                           LSI01_01660 (fasta) H_caramel PDU1C (HMM details)
                                                                                              LSI01_01670 (fasta) H_driedBlood PDU1C (HMM details)
                                                                                                LSI01_01680 (fasta) HMMpropdeh3_2_pdusml PDU1C (HMM details)
                                                                                                             LSI01_01690 (fasta) HMM08841dhact_1_pdu PDU1C (HMM details)
                                                                                                                 LSI01_01700 (fasta) HMMpropdeh2_1_pdu PDU1C (HMM details)
                                                                                                                      LSI01_01710 (fasta) HMMpropdeh3_1_pdu PDU1C (HMM details)
                                                                                                                                  LSI01_01720 (fasta) HMMpropdeh1_1_pdu PDU1C (HMM details)
                                                                                                                                       LSI01_01730 (fasta) Tsp_sunYellow PDU1C (HMM details)
                                                                                                                                         LSI01_01740 (fasta) H_caramel PDU1C (HMM details)
                                                                                                                                               LSI01_01750 (fasta) HMMreg12833_2_PDU PDU1C (HMM details)
                                                                                                                                                 LSI01_01760 (fasta) Hp_euts_babyPurple PDU1C (HMM details)
                                                                                                                                                    LSI01_01770 (fasta) HMM03358reduct_1_eutgrm PDU1C (HMM details)
                                                                                                                                                         LSI01_01780 (fasta)
                                                                                                                                                             LSI01_01790 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      2x H_caramel
       H_driedBlood

BMC-Hp(map on tree)

       Hp_euts_babyPurple
       Hp_euts_iceBlue

BMC-P(map on tree)

       P_murkyGreen

BMC-Tsp(map on tree)

       Tsp_sunYellow

(complete list of loci)

Protein sequences:

>LSI01_01490_UniProt_A0A0R2LC70
MEVNSNTETATPVAEKTTHGLPKLKLSTIFAMTFGFFGVNMAFSLQSSQMGRIFQTIGADPTKLGFFFILPPLAGMVVQPLIGKYSDLTWNRFGRRMPYLMIGAPIAALVMILLPNAGSFGFGYGSLLALLFGAFTILFMDLSSNICMQPFKMIIGDMVNEDQKDLAWSWQQSFSNLGGVVATVAPYILTIFGVSNIAPKGEVPASVKFAFYFGAAILLLTSLYTVLSVKEYDPKTYAGYHQIDLANEAPQPSLWHLVKVAPKAFWEVSFVQLFAWFAFQYLWTYSTGAIADNVWNTTNPASAGYQAAGNWFGILTCIQSVAAVVWGMLLLSRTKATQRKLWYRVGLVMGGCGFIAVFFTHTQLGLIVPFCLIGISYLTMQTQAFSLFTESLDGTNEGAYMGLFNCGICLPQIIASVASFALFPLVGKSMPAMILIGGVALILGAFAVSAIHPVVSGKAEKGAK

>LSI01_01500_UniProt_A0A0R2LA67
MTVTIKDVAKAAGVSIATVSRVLAHKVDFYAPETAAQVTKVAKELGYQRNVTAAELATKTSDVLAVIISATKTNFADSIIEGIQDVAFAQGLSVIILYAGENNDDLQHKALTTVIERSVRAILIVALELNEDNRQLLDDSAIPHVFLANASDKNKGLFVASDDFKIGKATTTYFLDQGYTSIGLVGMDRTSYVGRQRINGYLAALKQHDITPGDNWIQGGNFRYEDGVTAMKAYGPKPPVQAVIANSDVSALGVINTAHQFKLDIPSQLAVLSVDGTQLIEMFRPQVTALVQDFAAIGRRGAEMLLKQIPEASQFIDFKIHDGESTK

>LSI01_01510_UniProt_A0A510VSK2
MMNEQTNWQTDEAKEYTHDTDKGSIVDLPTRGYITLSGVGNADPNNRDFIDRADALCKVADFLANAPENDLEVEGYTPFKRYPLQAMWQRVTPGRDAQWRYQLMIRQPEFITKEILQSAEFSILNVDQSYLWDIRLLHFSEGLEAQIGNVGTIDRRGRVNSKLQQFIRDSGYRSLAAEGWHMELYLDDVARTPGDQWHTILRNGIEPMDITKVMKRGVPIVEGK

>LSI01_01520_UniProt_A0A0R2LAW9
MNQQKLAQLSTDVTGWLISVGEKLRPGVKAIETVDTKSSRNDLVTNEDVAIEDFLEQQIHEHYPEARIVGEENKKSRVQDLDGLVFFVDPIDGTLNFVRKHDCFASMIGVYENGEPVFGAILDVMENDLYWGGPQLGVFCNEEKLPSVDDKPLAEGLIGASWRQLFTNRFNLGTVGYHASGVRILGSAGLEFVQLLHGRHVGYVSTLNPWDIAAGKILAEALGYKTSTVAGQKVNLLHTCDFVVMTPKAMKEFNALTYA

>LSI01_01530_UniProt_A0A0R2L330
MRRPLLVGAVGCGKTTLRQRLAGVAIKYDKTQSVEFFKDAVDTPGEFVEHHRFYSALSVTAAEADIILMLQSILDKRQIFAPGFATMFNRPAVGIITKVDLATDEQQIAKSAKYLRMAGAKKIILCSAIKDIGTVNIENVLDLKGGE

>LSI01_01540_UniProt_A0A0R2L361
MDGSNTEEQDKIFQEYNEKQVDAYSALDELTAWLGLCRVRAVNNGLRPFDAEFKTIQRLLFCIGGDLPLRRGSDRKHLFPIGANEWLSGLTTQYSVTLPELHQFVVPGGSIQATELQVARTMALKAYRTVKLAVEDEHSEMILFLNTLSNYFFVLARYVYIELGVQEELFDADDPEWPF

>LSI01_01550_UniProt_A0A0R2LC09
MAENDFEPTEELERVIQESVPGKQVTLAHVIVHPDAEIFDKLGIDDTSSSLGLLTITPGEAAAIASDVASKSGSVEVVFIDRFSGSVLLAGMVDDVKSAIQAAESTLHSVLDFTITPVTQS

>LSI01_01560_UniProt_A0A510VS90
MLHKVLAINSGSSSLKFKLFEMPTEKVLAAGQIERIGKTDAALKFSYTPEGSAETSKIEQKQPIESHEVAVQLMTQALIDNKVIESLSDIEGVGHRVSNGGDYYHDAVVVDDEVEQRIDELSALSPLHNPVNLQGMKAFDLQLPDVKQVATFDTSFNATIPLSTALYPIPYKYYEKYGIKRFGFHGPSHQYIAQETAKLVPEAHKLISCHIGNGASISAILDGKTINNSMGFTPLAGLMMGTRSGDIDPQIIPFLEEHEHLDADGIKAMLNEQSGILGISEISNDLREVEDAAAEGNKRAILTLAMFVHQIDFYIGAYAADLNGVDAITFTAGVGEHSATVRKLVAEHLSYLGVKIDDEKNNANAEFIQSADSKVKVLVVPTDEEVIIARDVVRLLKLGD

>LSI01_01570_UniProt_A0A510VM22
MNGFLGELLGTFVLIVFGAGVNCGVNLNKTYGKKNGDWLLITFGWGMAVTMGVYVAGSIGSLGHLNPAVTIAEAAFGLFPWSKVVAYLLGQFIGAFLGAALVVVHYYPHLKVTKPEDGNHVSNFATLPAISNPLFNFLSEIIATFIFIYVLLNLGNFTVGLKPFIVGFLILAIGMSLGTTTGYAINPARDWGPRLAYSILPIPNKDSSHWEYAWIPMVGPIVGGLLATALFKIQ

>LSI01_01580_UniProt_A0A0R2LD21
MEKFTIPTKIISGSDSLKVLAAFESKKVLFVCDPFLDGSDTLKEIEHELPGSAEIKVFSDVKPNPPLTNITEGVRVYQEFVPDVIITLGGGSAIDTAKAIRNFGEKILDQQLECFVAIPTTSGTGSEVTNTAVVSDEANHAKFPIINDHLIPDIAILYPQLVMSAPKSVTAYSGLDVMTHSLESLVARDGNLFTEALAEKAIDVIGKELVTAYREPDNLEVRKVVHEAATAAGLAFNTAGLGITHSIAHQLGAQFHVPHGLACAMLLPHVVAFNAQDKACEEKYACAARKAGIADADSSNHMAVRQLIRKLQKMMRQMNCPETLAAFGVKPADAKQACATIIAAAKEDGTFPGNPIVPTDEQLAAVYKKVIE

>LSI01_01590_UniProt_A0A0R2L3F6
MAELEEQIRKIIKEELGQQSGNDANVAPASSHTAGGHLGIFPNVEDAIAAAKAAEDRYVDASIETRNQILDAIKEGFRPYIEQMAKAIREETGMGTVQAKIAKLNNALYNTPGPEILQPEAETGDGGLIMYEYAPYGVIGAVGPSTNPSETVIANAIMMLAGGNTVFFGAHPGAKNITRWTIEKLNEFVEKATGWQNLVVGIENPSIEAVQTMMQHPDIALLAVTGGPAVVHQAMTSGKKAIGAGAGNPPAIVDATADIKLAAHNIIESASFDNDILCTAEKEVVVEQSVKDELIRDMQNENAFLVTNPADIQKLADMTITDKGTPDRKFVGKDATFILDQAGISYTGQPVEIILEAPKDHLLVVTENLMPILPIVSCPNFVSALRTAVEVEQGFHHTASIHSRDLIHINKAAHRMNTSIFVVNGPTFSGTGVGFTGASALTIATPTGEGTTTAKSFTRRRRLNSPQAFSLRSWND

>LSI01_01600_UniProt_A0A0R2L3N1
MAVENILSSVQAAFKKQDGSALFSRENFQHAFDAVEAKANEQHVGVSMCIMDAAGNPLMQYHMTNANLVSIELAPKKAWSALAMKQPTKDVSDQIQPGAPLYEMETMLDGKLVSFAGGLPLIVNDQIIGAFGVSGGAVEEDQACCEAGVKQFLEGIK

>LSI01_01610_UniProt_A0A0R2L3R4
MAIYTKTGDKGTTSLFTGERVKKYDIRVETYGSFDECNAQISVAEKFCQREKNKELLKWVQYRMFILDGEIASSDPDKFYGKSDRITEADVHRMEGVIDEYTNKLPELHSFILPGTSLAGAHLHLARTVCRRAERLLIHVNEEEPFRAEVLRYANRLSDFLYIVARDEDEYARTQGICNEVLKRYQEALANK

>LSI01_01620_UniProt_A0A510VP91
MYMAKVVGSVVATQKDESLVGRKLMIVQPINSEMDPVRTEEVAADTVGAGIGELVLLVRGAGARKTQNEGTHTRDVVDSAIVGIIDRFDK

>LSI01_01630_UniProt_A0A0R2L393
MDIDQLVNLVVARLQRRFHSQRTVDFTDIMTIDDRVLVDNARITVDDVSVFALKKLMMLDEDDAFTRFVLAGIGLGTDVTLRVNFAEVNLIPEKLIVDWPVKIELATQQQVVSVPGRFLTRSDIMNLPEQAVLIKTRSQLLTQLAEDTVRQQKIQVMERMNQSCIWQK

>LSI01_01640_UniProt_A0A0R2L3M0
MFEDQVKQLRQFNKLVHSSTHADNKLATGQLRVGIDLGTATIVFAVINEQGDPVYGESVPDQAIRDGVIVNYLDAVRIVQGIRERAEAALGTQLTTAAGAIPPGVGTGNSKAVANVIEDAGLHCSNIVDEPTAAATFLKVKTGTIVDVGGGTTGISVFENNKLIHVGDEATGGYHMTLVLAGSEHISHTEAETLKQDHQREHEVFPVIRPVVEKMATIVDQVAEQRPVEPIVVVGGASNFSEFTTTMAKVLDQPVEGIINPEFVTPLGIALSDDPLQEATSDGY

>LSI01_01650_UniProt_A0A0R2LC49
MNDNELRALIKQIVEEETQPGIPIGVSNHHIHLSEEDFETLFPGQKMTKFKNLRQPADFASNSKVTVVGPKGEIPGVRVLGPYRKQSQVELSLTDGFQIGVNLPVRMSGNLDGAPSVTLKTDAAEITVAGAIAAKRHVHMSLEDAKKYGVKLGDNIAVEVTNGKRRLVFNDVVARPREDFVLEMHIDTDEANAAGLSKDSIARIISDNN

>LSI01_01660_UniProt_A0A510VSA1
MNNALGMIETKGLVSAIEAADSMVKAANVELTGYEKIGSGLVTVMVRGDVGAVKAAVDAGTASAENVGEVYASYVIPRPHTDVEGILPKSEK

>LSI01_01670_UniProt_A0A0R2L3E8
MSEALGMVEVGGFSTVVKVADVMVKTANVHIEKIERARGAGQMTVFVSGDVGAVNAAVAAGANIAADVDKFVAKQIIPRPAAGIDSLVKAAKNFPTAVSETVDSTKEVDTPVVEKPESVKEQATPASQAAKPESKPATTKRTTTSRRRTNNKNTRPKQ

>LSI01_01680_UniProt_A0A0R2LAV1
MAVEPKILIAGKSSQSVEPLLNGIEEEEIPYQMTDKVSGENTVELAHEASLASQLHVGLATDDQFAYLHLNSLPVDKPLARVALSDKEDLRRLGANAARLVKRVPFKDFERGGEIL

>LSI01_01690_UniProt_A0A0R2L312
MAQKVIGVDIGNSSTEVALADVSADGQVDFINSDITATTGIKGTKRNLVGVRTAINGVLAKSNLDVSDVDLVRINEATPVIGDVAMETITETIITESTMIGHNPRTPGGVGLGIGETILISDVIRQGNTDTNYVVLVPKEVDFGDAAKLLNAYAANGYKITGAILQGDDGVLIDNRLNYKIPIVDEVSLLEKVPQHMLSAIEVADKGGVIRQLSNPYGIATVFNLTPEQTKNVVPVARALIGNRSAVVIKTPAGDVKARVIPAGSINILGDDHQENVGISDGADKIMKTVSSFKQIDNVTGESGTNIGGMLERVRQTMADLTDKKMQDIFIQDLLAVDTSVPNDVKGGLAGEFSMEQAVGIASMVRTDHLQMQMIADEIQKEFDVKVEVGGAEAEAAIRGALTTPGTQAPLAILDLGAGSSDASIINKEGKIVAIHLAGAGDMTTMIINSELGLDDVYLAEDIKRYPLAKVESLFYIRHEDGTVQFFDDALPGNLFARTVVVKPDGFVPVPGDVSIEKIRSVRQSAKQRVFVTNALRALAKVSPTGNIRDIPFVVIVGGSALDFEVPQLVTDALSHYNLVAGRGNVRAIEGPRNAVATGLILAYANELKEGR

>LSI01_01700_UniProt_A0A0R2L341
MSEMEDLVAKVMADMQNSATKSTDAPVNAGSTTPTASATTDGKELGRDDYPLFSKHPDMIKSPTGKSVTDITLENVVNDKITADDLRITPATLKAQGQIAKSAGRTAIQGNFDRASELTAIPDKRLLEMYGSLRPYRSTKQELLDMADELEQQYNAKICATWVREAAKNYELRKKLKGDN

>LSI01_01710_UniProt_A0A0R2LBZ6
MADVDVALLRKIVQEVIKETNDASQPISFKSEDQPTPATEAPVASKKVPAGMDAPKQLDWFKHVGPAKQGTAVDEVVVAVLPGFAEHLTENMTGLSHKDILRQVTAGIEEEGLRARVIKVYRTADVSFAGAEGDKLSGSGIGIAIQSKGTAIIHQRDEEPLSNLELFPQAPVLTLDTYRAIGVNAAKYAKGESPTPVPTVNDQMARVQYQAKSALMHIKETKYVVLGKQAEEIQVSF

>LSI01_01720_UniProt_A0A0R2L8X2
MKRQKRFEELEKRPVHLDGFVKEWPEEGFVALEGPNDPKPSIKIENGVVTELDSKQRDEFDLIDMYIADHGIDKSRAVEVMNTDSYKLANMLCDPNVPREDIIPLTTAMTPAKAVDVISKLNFVEMMMATQKMRPRRTPATQAHVTNLKDNPVQIAADAADAALRGFPEQETTTAVGRYAPFNAISIMIGAQTGRPGVLTQCSVEEALELSLGMRGFTAYAETISVYGTEQVFTDGDDTPWSKGFLASCYASRGLKMRFTSGSGSEVMMGYAEGKSMLYLEARCIYITKASGVQGLQNGGVSCIGIPGSVPSGIRSVLGENLICMMLDLECASANDQAFSHSDMRRTERLLGQFLAGTDYVSSGYSSVPNEDNMFAGSNTDAMDYDDYYVMQRDLKINGGIVPVKEEDVIKVRNKAAKALQTVFEALGLPKITDEEVEAATYANTSRDMPERNMVEDMKAAQDMMNRGITGLDIVKGLYNGGFRDVAQAVLSLLQQRIAGDFLQTSAIFDKDWNVISAVNDKNDYEGPGTGYRVSGETWEKIKDIPMAIDPSDF

>LSI01_01730_UniProt_A0A0R2L8Q7
MADTDELVNRVMGKLLDASNSGSKPATKNVGKTDLTEFVGTAPVGDTIGMVIANVDSELSKNLHLQSEFRSLGILSARTGAGPQIMAVDEAVKATNTEVVSVQMPRDTKGGAGHGSLIIVGGNDVSDVRRAIEVALADVPNKFGDVYNSAAGHLELQYTARASEACHFAFGAPVGKAYGLIAGAPAGIGVVMGDTALKAANVDVLSFASPAYGTSYSNEGVLHISGDSGAVRQAVIAAREVGLKLLGTLGEEPKNDFPSYI

>LSI01_01740_UniProt_A0A0R2LD04
MDREALGLIETRGLIASIEAADAMVKAANVKLVGQEKIGKGLITVMVRGDVGAVKAAVDAGVSAAEEIGEVVSNYVIPRPHQDVEALLPKENK

>LSI01_01750_UniProt_A0A0R2L3E0
MEKNLTQIMTAAHIQQLNQLLQNFSEATGCITTLTDTAGQSICNTFGLSIFQPFNDKPMDDLNVPQNLSTHLDNHYSLSRLPIVLNHEAIAYACCGNTASSGMARSPFGPTGNSSGEHVQASVILLRLIIQREVDRYASAAPESAAPIVANNTVISFNRAPEKNVPVSNSLDRIESIKTKNKEINDALVYIEQHLNQNISLEEVAQRVYLSSFYFSKLFKKSTNMNFSDYLAAKKIKRAMVLLQDTTTPVKLISKRLGFSKTSYFSKTFKKYTNTTPSEFRKASQ

>LSI01_01760_UniProt_A0A0R2L3L5
MAEAKKIKRIIQEYVPGKQVTLTHIISSPTADVFEKLGIEDTHDSVGILTITPAEAAIIAADVALKSGGVEIGFMDRFSGTIILHGSIDGLVAAFESANAKMATMLHFSVSKITQS

>LSI01_01770_UniProt_A0A0R2L3P7
MKSIVCLNGGTSLTSYNRLLTKYLAGNYQAVVTWEEPDLLELPFIDGTGVNDGNEQLRTFLKQVTEADGIVIATPEYNNGTTASIKNALDWCSYQPYPLKNKPTMIIGASVGQLGTVRAQENVRAVLRSRSLAPQLVDTPEVLIGNADCKFDEDGNIMDQRTKKLLTLSMNALLNLM

>LSI01_01780_UniProt_A0A0R2L497
MARLLLYPQKKVSDALQIQLKDAGPVVYYPLRRLEARNISEEETQRALQAEVVVISSHFALQVFNASLNMFPQVGVACVLSAKMALDVSKQFSGTVVISAQENQSSLRERTLDYSNRKVVWLEGDHFEPSFQKNDQVDVLTVYKNVWLESDTQAAVNVMKNYQFNQILVTSPSAFERLLKIIQLLVNSENWNEASYYTLGERTYTTVQNHFEKVWIPREHHNVLAKAVQQMLGDNQ

>LSI01_01790_UniProt_A0A0R2L379
MELILARHGQTNFNVAKKFYGALDVPINENGRNQAELLADKLRDFEISKIVTSEMTRCVQTATPTAEEHKMKISQNGLFNEKSFGRWEGLDADQIEALDSKEWWSWLNAPFTYTPPAAEPFDTFFERVTKGVSELLIDRQTSNKVLLVCHLGVLRSVNQLLFPGTDFWSVDFKAGCYTQFHLDEDSVRVVTRNQ