BMC type: PDU1C


Organism: Lactobacillus collinoides DSM 20515 = JCM 1123. Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

        FC82_GL003355 (fasta)
          FC82_GL003356 (fasta)
              FC82_GL003357 (fasta)
                    FC82_GL003358 (fasta)
                          FC82_GL003359 (fasta)
                               FC82_GL003360 (fasta)
                                  FC82_GL003361 (fasta)
                                            FC82_GL003362 (fasta) HMM00389acidehy_1_aci PDU1C (HMM details)
                                                   FC82_GL003363 (fasta) HMMnopfamclust3_1 PDU1C (HMM details)
                                                             FC82_GL003364 (fasta) HMMreg12833_2_PDU PDU1C (HMM details)
                                                               FC82_GL003365 (fasta) H_caramel PDU1C (HMM details)
                                                                      FC82_GL003366 (fasta) Tsp_sunYellow PDU1C (HMM details)
                                                                                      FC82_GL003367 (fasta) HMMpropdeh1_1_pdu PDU1C (HMM details)
                                                                                            FC82_GL003368 (fasta) HMMpropdeh3_1_pdu PDU1C (HMM details)
                                                                                                 FC82_GL003369 (fasta) HMMpropdeh2_1_pdu PDU1C (HMM details)
                                                                                                                   FC82_GL003370 (fasta) HMM08841dhact_1_pdu PDU1C (HMM details)
                                                                                                                         FC82_GL003371 (fasta) H_driedBlood PDU1C (HMM details)
                                                                                                                           FC82_GL003372 (fasta) H_caramel PDU1C (HMM details)
                                                                                                                             FC82_GL003373 (fasta) P_murkyGreen PDU1C (HMM details)
                                                                                                                                  FC82_GL003374 (fasta) HMM01923cobtr_4_eut2 PDU1C (HMM details)
                                                                                                                                     FC82_GL003375 (fasta) HMM03928Haemd_3_pdu PDU1C (HMM details)
                                                                                                                                       FC82_GL003376 (fasta) Hp_euts_iceBlue PDU1C (HMM details)
                                                                                                                                               FC82_GL003377 (fasta)
                                                                                                                                                    FC82_GL003378 (fasta) HMM03358reduct_1_eutgrm PDU1C (HMM details)
                                                                                                                                                        FC82_GL003379 (fasta)
                                                                                                                                                            FC82_GL003380 (fasta) HMM10662PduV_1_mix PDU1C (HMM details)

BMC shell protein types:

BMC-H(map on tree)

      2x H_caramel
       H_driedBlood

BMC-Hp(map on tree)

       Hp_euts_iceBlue

BMC-P(map on tree)

       P_murkyGreen

BMC-Tsp(map on tree)

       Tsp_sunYellow

(complete list of loci)

Protein sequences:

>FC82_GL003355_UniProt_A0A0R2B5R8
MFMDKKSLQELIDESRASRPAGGVVVSEDETHYQINDHPYELLTNYRDAFDKMELSDRFNAYFSKYDYLVGDWGFGQLRLRGFYGEERNVPAEAKITALQDYLDENCNIGCPYFVLKNQDVRVVEPKKRKPRPSNSRRHRNGSHRNNATPQDGEQHQANARNQSSDTRHQNNANKNNNHGRSNNGHNGSNNGNGQHRNSRNSGNNRSNHQPKRQTAYVTEQIKEVKQTPLSKRDGTVKTVGHSKHRRFTIREKKD

>FC82_GL003356_UniProt_A0A0R2B6C9
MKKHYDGYFIDLDGTIYAGKRRIPAAKRFIERLQDTDTDFMFVTNNTTKLPIDVVQNLADNHDIHVAEKNVYTAGLASADYVAQVAKPGQDSVYIVGESV

>FC82_GL003357_UniProt_A0A0R2B5S0
MIQAFLDRGFHLTEHDPDFVIVGLDSDVTYHKLSLAILAIRAGAIFIGTNPDSNIPNELGMLPGAGSFVEMVAYATQQRPVYIGKPRSIIMANALKRSGLRKDQVVMVGDNYRTDITAGLDFGIDTLLVYSGLSKRAEVEQEDRQPTFEIDSLDDWELI

>FC82_GL003358_UniProt_A0A0R2B7W7
MLRLRRFFAWTVFYLALVSLIIFLTINSFWLYRLNLNFSTIPHQVGLSVGKIMTNYHQLLAYLELPWVHHLDMMNFPTSPNGLQHFIDVKHLFLLNNVILLVTIIPAVIFVVRLVRHQQSWMFIRTFQIAAVIPVLFGLIMLVNFNGFFIAFHKILFRNSDWLFDPQFDPVINVLPESFFAQCFIMAFGLFECVMIFGIVFGKHQLKMSTQ

>FC82_GL003359_UniProt_A0A0R2BGH8
MDIYDLKGLIAYMTFLTTLIDFVLHIDQHMIAIVNTFGGWTYGILFLIVLVETGAVILPFLPGDSLLFAAAALAANPEYHLSILVFIVIFLAAAIGGDSLNFFIGRHLGVALTKNRFFSRVFSQQKLNEAHGFFDKHGAMAIFLARFMPIIRTLAPFVAATSNYEYKSFIKYNVAAAICWVGLCSAGGFFFGNIGFVKDHFSLVVIGIIIVSMIPAFVGFLKGRRSPAGEE

>FC82_GL003360_UniProt_A0A0R2BA20
MEVLLVSFPQLHLDTVNGPKAVMHTSLGDIKIQLFPEQAPKAVENFVSLANDNYYDDGVFHRVINDFMIQGGDPTGTGMGGDSKWGAPFEDEFSKEVYNLRGALSMANAGPNTNSSQFFIVQNQHLSEQLSEQMKDAHFPDEIVTAYQKGGTPWLDFRHTVFGQVAEGMDVVDEIATVKTDGSDKPLTDVKLTSVEIIDD

>FC82_GL003361_UniProt_A0A0R2B764
MYHIGEQVTGTVTGIQPYGAFVDLGDNTQGLIHISECHYGFVKDIHQYLSVGQALTVVILDIDEFTGKISLSLRCLEEPKAVTIDQPENHHKHYWTSRNVHEGFTPIADRRHGWEQEALREFVRK

>FC82_GL003362_UniProt_A0A0R2B6I9
MSDVNEDLIREVVKQVLAASGSNTDSDAAKGFNSTNGKKIFAFSIRKDEEPYLREWASKHPKIEVGYTDELLSAETAKYAKGADGVVVYQQLDYTADTLQALADQGITKMSLRNVGVDNVDMDKAKELGFQITNVPVYSPNAIAEHAAIQTARILRQTKVLDTKIANGDLRWAPTIGREVRDQTVGVIGTGHIGQVYMQIMKGFGAKVIAYDPYENPELKKKGYYVNSLDDIYAQADVISLHVPATKENAHMINSTSIAKMKDDVVLVNCSRGALVDTDAVVKALDSGKVFGFVMDTYEDEVGIFNADWRNKSFPDNRLKDLIQRQNVLVTPHTAFYTTHAVRNMVLKAFDNNCELINGKTADTPVEV

>FC82_GL003363_UniProt_A0A0R2BE92
MGRLQGKVALVTGGSKGIGKAIVERFAEEGAKVVFTAIEKEAGEDLEKELIPNRLVFMQQDVSKKADWERVIKATLAKFGKINIIANNAGIGLYADIEEMDEKNWNATIGVNLTGTMWGVKYGIKAMKENHEKNSIINLCSVEGLIGDPDLLAYNASKGGVRLLTKSAALDCARKGYDIRINSVHPGYVDTPLVANLEKTDPKVKDHLVSLHPMGRLAKPVEVANMALFLASDESSFSTGSEFLVDGGYTAQ

>FC82_GL003364_UniProt_A0A0R2B5R9
MNFPSQESHYIRIKRILSLFNQLTKTHLSFVDTSLHLVSSDGLLLDSTKIVSFFYKKGPSLFFPLITNDQFNGMFIVNKNSIPVNVTTLYQEALHSISLNVLSAYYQKIDILSPLAKDELEKGGKLFSLIASGLASKNKISTSKFENSSDFENSDGVNNIDIALTYIEHNIDQKLTLVNVSKNSYLSPAYLSRLFKEYFKINFSNYIRARKIALAQTQLISTDEPIDKVSRKIGFSRANYFNKVFKETTNLTPLQFRKMYTGAKKIYTIHRELEWNDNISVYAVSRQYFQKQGVTLKEEIINGYPCLTSIDGLSSPDNKNGWIYLIDGVQPQTLPSESYVKDKSVIQWIFVTL

>FC82_GL003365_UniProt_A0A0R2B566
MEQEALGMIETRGLVPSIEAADAMVKAANVALIGQQKIGAGLVTAMVRGDVGAVKAAVDAGVQAAGNVGEVVSSYVIPRPHTDVEKILPHKE

>FC82_GL003366_UniProt_A0A0R2BDJ6
MIDFLNSTSVAPEFVGADPAGDTIGLCIPNVDPQLLEKMHVKKKYSVIGIVSDRTGGGPQLFSMDEGIKSTNTECIDVEWTNDTKGGGGQGCMIVIGGYDPSDVRQAIKVTFENLHHYFGDVYGNDAGYIELQYTARAAGALTQALGADEGKAFGILNACPAAIGIVMADTALKTAGVKAIAVATPSHNSSPSNEGTLLISGDSGAVRQAVIAGRERGLELLGQMGDKPKNDYPSYIH

>FC82_GL003367_UniProt_A0A0R2B635
MKRQKRFEKLEKRPINKDVIVKEWPEEGFVAMKSPNDPEPSIKVDNGIITEMDGKKREDFDLIDMYIANYGINIDNAEKVMATDSTKIAKMLIDPNISHQDVLAYTTAMTPAKGQDVINQLDFGEMIMGAKKMRERRKPANQCHVTNYIDNPVELAADAAEAALRGFAEEETTTAVSRDAPFNALSVLVGSQTGRPGVLHQCSVDESTELQLGMRGLTSYAETISVYGTDRSFTDGDDTPWSKGFLASCYASRGIKMRFTSGSGSEVLMGYPEGKSMLYLEARCILLSKASGVQGLQNGSLSCISIPTAVPNGLREVLGENLLAMMYDLESATGSDQSFSHSSMRRTWRFMGQFIGGTDFICSGFGAEPNPDNTFAGSNEDVYDYDDIHFLSRDYGQSFGIHSIKEEDAINVRRKAAEALQVVFKGLGLPTITDEEVEAAAYADVHEDMPKRDKVADMKAAQNMMDRGITAVDVIKALIDGDFKDVADAILNLQKQKVVGDYLQTSAIFDEDWNVQSAVNESNDYQGPGTGYRIYNDPDEWKKVTDIPQVIDPEHFDM

>FC82_GL003368_UniProt_A0A0R2BDA7
MADIDEKLVRQIVREVLAQTHIDKPINFQKASTQANNISSSENASGNVHAVPENNVDWFQPLGQAKPGYSKDEIVIAVAPAFATVLTKTESGISHQEALRQVVAGIEEEGLKARIIKVYDTSDVSFLAVEADHLSGSGISIGIQSKGTVIIHQKDQEALNNLELFPEAPVIDAEMFRAIGKNAARYAKGDSPEPVSQPNDQMARPNFQAISAILHIRETHQVISGKSAEEIKVTL

>FC82_GL003369_UniProt_A0A0R2BFA9
MSDINELVSNILKQVDNSDTASTQYTGTANDSSSAAGKQYGVEDYPLYQKHRDIIKTPSGKSLNDVTLDDIANNRVDRKDLRITADALKMQGDVAGAAGRKTLQMNFDRAAELTKIPDDRLLEMYNALRPYRSTKDELLQIAEELKSKYNANICAAWFEEAAKYYSSRKKLKGDR

>FC82_GL003370_UniProt_A0A0R2B4T5
MAIEKVIGVDIGNSSTEVALANVSDTGEANFIESGIAATTGIKGTKENLIGIRDSINQVLDKAKLSISDIDLIRINEATPVIGDVAMETITETIVTESTMIGHNPDTPGGIGTGSGVTIPILDLVSENDKNRDYIVIVSKDIDFENCAKLINAYGESGYHISAAILQNDDAVLVDNRLTTKIPIVDEVALIDKVPTRMLAAVEVAGPGQVISQLSNPYGIATLFKLTSEETKNIVPVSRALIGNRSAVVIKTPAGDVKARVIPAGNIIINGNTGKDEVGVSEGAAAIMKKISQFRHIEDITGESGTNIGGMLEKVRQTMATLTGKQNKDVAIQDLLAIDTQVPVKVKGGLAGEFSNESAVGIAAMVKSDRLQMEVIAKLIEKELNTKVEIGGAEVESAIRGALTTPGTSKPIAILDFGAGSTDASIINKEDQTVAIHLAGAGDMVTMIINSELGLSDVHLAEDIKRYPLAKVENLFQLRHEDGSVQFFEKPLPSELFARVVVIKPEGYEPVTGNPSIEKIKLIRQSAKKRVFVTNAIRALKYVSPTGSIRDIPFVVIVGGSALDFEIPQLVTDQLAHYNLVSGRGNVRGIMGPRNAVATGLVLRYAEERGQNNG

>FC82_GL003371_UniProt_A0A0R2B4U6
MLHGLLREYHLRKYHKLGGENMEALGYVECNGLSSATVAADRMLKTSDVTLNRIRNADNGWITLEITGDISSVKVAVETVKQTLPDEYIAGLVIGSPSEGLNGLGTSGASDVAPQNFNPEKYNPDGSMKESAMFGPHAASKSKKVERAALKSTAVPENVANETSEVSTDDEQDDNHFDEVVTCNLCGDPKCPRKLGEPHNKCIHYNELKKK

>FC82_GL003372_UniProt_A0A0R2B5C6
MNNALGMIETKGLVPSIEAADSMVKAANVVLTGQEKIGAGLVTVMIRGDVGAVKSAVDAGVQAAQSVGEVVSSYVIPRPHDEVESILPALPETDTTEE

>FC82_GL003373_UniProt_A0A0R2B5S7
MAKVIGSVVSTQKDQSLVGKKLMIVRPIDSDQEPIRFEQVAADTVNAGIGDNVLVVRGAGARRADNGAGNNAPDVNDCTIVGIIDRFDK

>FC82_GL003374_UniProt_A0A0R2B591
MAIYTKGGDKGKTSLFDGLRVEKDSVRVETYGTFDELNANISLAEKFCINSDNKVLLQAVEYKMFYLQGEIATKDTKKFLNQSKSINDEDTHILENVIDRYTNELPPIQSFILPGTSVAGAQLHVCRTICRRAERSFVKLSKDVSFRPELERYINRLSDFLYIMARSEDYEDLINDVTNKVIRAYSKIEDVRKDE

>FC82_GL003375_UniProt_A0A0R2B7B3
MEKVIQTAVNRANDFDIGVTIVIMRDNQVVQMSYHMPNANLVSSTLARKKAWSALAMMDATINLSKEVQPGADLYQIETMMGGKLTSFGGGIPLKVDGHIIGAIGVSGGTVKQDQAICETAVDTFVKESE

>FC82_GL003376_UniProt_A0A0R2BFY5
MAHIVANPTPDIYEKLGIQTPKNALGILTITPSEAAIIAGDIATKSSNVTLGFIDRFSGSVVVVGEVSEVESALKDVVDKLHELLGFDVPEITRT

>FC82_GL003377_UniProt_A0A0R2B9L2
MPAGLTLGGMAMKAGRGISLQRGFNCRDLGCYPTCDGLTVKAKRLIRAGYLSDLNFRDQKKLYDYGIRTVIDLRSPFEVRKFPDLIDNRIQYIKMPISNEDLTESTVNVRNLVGQLTDKKAGHHQMVQTYQRLLTDSTVWLSYRHFFLTLSKLSANGVLFHCSTGKDRTGILSIFILSILRVPEKAIMNDYLLSNECSSIRINNRLNEAKTVNNNPAYLQSIFDLSTVRKEYFELVISIINNYGGFDSFFHNQIGLSDAVLNQIRDNYLT

>FC82_GL003378_UniProt_A0A0R2B6K5
MLNIGVLVGSLSSRSYSQKIANWLMSNQTSVHFFQINYEILPLYNPDLEDNSILEWQVFRSVIDKMDALIFVTQEYNFSIPGGLKNAVDVMSVPVPQSHVTNKPAMVLTDSSGDRGGANANAHIQQLLRYMGMDVINNFITIGKVQALFNKENELINQELAKQLDDTLKQFVYYIQKRQNE

>FC82_GL003379_UniProt_A0A0R2BEA9
MNAHVVYATITGNNEDIADIISDQLKKHDIEVIETEISQTDAAELQDADICVVCPYTYDEGSLPEEGMDFYDDLQNLDLTGKIYGVAGSGDVFYGDDFNKAVDEYSEAFKSAQATQGTENVKIDLEPIEDDVETLAKFTDALVSAAKK

>FC82_GL003380_UniProt_A0A0R2B5V5
MKKAMFIGPIGCGKTTLIQRLNEMQIKYNKTQTIEYYDNIIDTPGEYVEHRFMYSNLMTSAMGADVIVLMQSATDLRVILPTGFSSMFSSPTIGIVTKTDIAKNADVAIVKDRLNDAGAEPIISISSYNDTNIDKVSALLA