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BMC type: PDU1AB


Organism: Klebsiella pneumoniae. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

            SAMEA2053874_02715 (fasta)
                    SAMEA2053874_02717 (fasta) HMM10114PocR_1_pdu1 PDU1AB (HMM details)
                          SAMEA2053874_02719 (fasta)
                            SAMEA2053874_02720 (fasta) H_robinEggBlue GRM4 (HMM details)
                                  SAMEA2053874_02721 (fasta) Tsp_greenishBeige PDU1AB (HMM details)
                                               SAMEA2053874_02722 (fasta) HMMpropdeh1_1_pdu PDU1AB (HMM details)
                                                    SAMEA2053874_02723 (fasta) HMMpropdeh3_1_pdu PDU1AB (HMM details)
                                                        SAMEA2053874_02724 (fasta) HMMpropdeh2_1_pdu PDU1AB (HMM details)
                                                                       SAMEA2053874_02725 (fasta) HMM08841dhact_1_pdu PDU1AB (HMM details)
                                                                         SAMEA2053874_02726 (fasta) HMMpropdeh3_2_pdusml PDU1AB (HMM details)
                                                                           SAMEA2053874_02727 (fasta) H_tan PDU1AB (HMM details)
                                                                              SAMEA2053874_02728 (fasta) H_driedBlood PDU1AB (HMM details)
                                                                                   SAMEA2053874_02729 (fasta) HMMptac_2_mix PDU1AB (HMM details)
                                                                                       SAMEA2053874_02730 (fasta) HMM15953pduput_1_pdu1 PDU1AB (HMM details)
                                                                                         SAMEA2053874_02731 (fasta) P_babyPink PDU1AB (HMM details)
                                                                                                 SAMEA2053874_02732 (fasta) HMM01923cobtr_1_pdu PDU1AB (HMM details)
                                                                                                            SAMEA2053874_02733 (fasta) HMMalddh_1_eutpdugrm PDU1AB (HMM details)
                                                                                                                     SAMEA2053874_02734 (fasta) HMM00465alcdh_3_mix PDU1AB (HMM details)
                                                                                                                                SAMEA2053874_02735 (fasta) HMMPduS_1_all PDU1AB (HMM details)
                                                                                                                                    SAMEA2053874_02736 (fasta) Ts_dodgerBlue PDU1AB (HMM details)
                                                                                                                                      SAMEA2053874_02737 (fasta) Hp_euts_babyPurple PDU1AB (HMM details)
                                                                                                                                         SAMEA2053874_02738 (fasta) HMM10662PduV_1_mix PDU1AB (HMM details)
                                                                                                                                                  SAMEA2053874_02739 (fasta) HMMacetkin_1 PDU1AB (HMM details)
                                                                                                                                                         SAMEA2053874_02740 (fasta) HMM00288_1_pdu PDU1AB (HMM details)
                                                                                                                                                                 SAMEA2053874_02741 (fasta) HMMreg00392_2_grm2 EUT2A (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_tan
       H_driedBlood
       H_robinEggBlue

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

       Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>SAMEA2053874_02715_UniProt_A0A5E3DLA5
MATRRAFILAGTGSGCGKTTVTLGLLSLLQQRGLRVQPCKVGPDYLDTAWHTAISGVASRNLDSFMLPAPILNALFAEQLQQADIAVIEGVMGLYDGYGIDPNYCSSAAMAKQLGCPVILLVDGKAVSTSIAATVMGFQHFDPALNIAGVIVNRVNSEAHFQLLKSAIERYCQVPVLGYVPRVEGVALPERHLGLVTARESVVNQQAWRDFASLLGRTLDIDRLLALSELAAMPAGEWGEQLAADAGEGLTLALADDEAFNFYYPDNLALLARCGVKMVRFSPLRDRQLPACQMIWLGGGYPELHAAGLSANHEMLAQLRAAHRRGVAIYAECGGLMYLGTTLEVTGGERYAMVDIIPGHSRMGTRLTRFGYCEAQAQQQTLLAAPGEWLRGHEFHYSDFSPATPAVLACRKQRDGKTLQQWPGGWQSGSAFASYLHVHFAQRPTMLNHWLRAARRAQ

>SAMEA2053874_02717_UniProt_A0A5E3DH24
MISASTLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPFCQLMRQHPEHSGRCRMSDRCGGLEASKNDQLCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDIELVDILNVDDRWQDDPALVQAFRDVPEMDYSRVIASADLLKLIVENCLKKQLNFVVIKDNPPQNDPAQASRAASPHDGKMKKALRYIDAHLSDELRLEDVAAHVYLSPYYFSKLFKKYQGIGFNAWVNQQRMASAKELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAFRQQINAGSQTESF

>SAMEA2053874_02719_UniProt_A0A5E3DIT2
MNGSIRAQCIAEFLGTGLFLFFGICCLSALKLAGASLGLWEICIIWGLGISLAVYLTAGISGGHLNPAVTVALWLFACFPGRKVLPYIVAQVAGAFGGAVLAWILYSTLFTQFETVHHMVRGSLESLQLASIFSTYPAPELSIWHAALVEVVITSMLMGMIMALTDDGNGVPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFAWLAGWGDIAMTGGRDIPYFIVPIIAPLLGACLGAAIYRFLIANNLPCHTCVEEKNTR

>SAMEA2053874_02720_UniProt_A0A0J5AP49
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYERIGSGLVTVIVRGDVGAVKAATDAGAAAARHVGEVKAVHVIPRPHTDVEKILPKGNSQ

>SAMEA2053874_02721_UniProt_A0A0J4QF55
MSSNELVEQIMAQVIARVATPEQQALPDTPHPTGETAMAEKSCSLTEFVGTAIGDTLGLVIANVDAALLEAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIVLGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFGAPLGRACGIIVGAPASVGVLMADTALKSANVDVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVISAREIGKTVLGTLGAEPKNDRPSYI

>SAMEA2053874_02722_UniProt_A0A5E3DJD6
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIRIVNGAVTELDGKPVDQFDLIDHFIARYGINLARAEEVMAMDSVKLANMLCDPNVKRSDIVPLTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNIKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSELQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSALDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAKGGFPDVAQDMLNIQKAKLTGDYLHTSAIIVGEGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNELG

>SAMEA2053874_02723_UniProt_A0A378FC81
MEINETLLRQIIEEVLSEMKSGADKPVSFSAPAASVASAAVAPVSSDSFLTEIGEAKPGTQQDEVIIAVGPAFGLAQTANIVGIPHKNILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQRGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRMAL

>SAMEA2053874_02724_UniProt_A0A0J4XLJ4
MNTDAIESMVRDVLSRMNSLQDGATPAPAAPTNDTARQPKVSDYPLATRHPEWVKTATNKTLDDLTLENVLSDRVTAQDMRITPETLRMQAAIAQDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTQAELLAIADDLEHRYQARLCAAFVREAAGLYVERKKLKGDD

>SAMEA2053874_02725_UniProt_A0A5E3DLC4
MRYIAGIDIGNSSTEVALATVDDAGVLNIRHSALAETTGIKGTLRNVFGIQEALTQAAKAAGIQVSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGVGLGVGITITPEALLSCAADTPYILVVSSAFDFADVAAMVNAATAAGYQISGIILQQDDGVLVNNRLQQPLPVIDEVQHIDRIPLGMLAAVEVALPGKIIETLSNPYGIATVFNLNAEETKNIVPMARALIGNRSAVVVKTPSGDVKARTIPAGNLLLIAQGRSVQVDVAAGAEAIMKAVDGCGKLDNVAGEAGTNIGGMLEHVRQTMAELTNKPAQEIRIQDLLAVDTAVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMALIAREIEHKLQIAVQVGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINAQGEISATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFPSALPPAVFARVCVVKPDELVPLPGDLPLEKVRAIRRSAKSRVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEIPQLVTDALAHYRLVAGRGNIRGSEGPRNAVASGLLLAWQKGGTHGE

>SAMEA2053874_02726_UniProt_A0A5E3DH42
MESSVVAPAIVIAVTDECSEQWRDVLLGIEEEGIPFVLQAQTGGDLVHHAWQAAQRSPLLVGIACDREQLIVHYKNLPASTPLFSLRNHQDRLARRNTGNNAARLVKGIPFRDRNA

>SAMEA2053874_02727_UniProt_A0A0W8ANF5
MNNALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASVVGEVKSSHVIPRPHSDVEAILPKSV

>SAMEA2053874_02728_UniProt_A0A5E3DJ72
MKQSLGLLEVSGLALAITCADAMAKAAAITLLALEKTNGSGWMVVKIVGDVASVQAAVMTGAELADRQQGLVAQKVIARPGAGLLPARVEAPSPAPDAALEEENATVMDERRDPADTLPRPAEQVTCNLCLDPHCSRQKGEPRSQCLHAGKRGDA

>SAMEA2053874_02729_UniProt_A0A0J4VPZ9
MDKQQLASTVNKVLDEMRQRPIPIGISSRHIHLAAADYARLFPAQPIQPKKALLQPGQYAAEQTVTLVGPKGRLNNVRLLGPLRQTSQVEISRTDARTLGIAAPLRMSGNLQDTPGIRLISPFAELELSSGTIVAQRHIHMSPLDALILRVAHGDSVAVAIEGSDRRLIFDNVAVRVAPDMRLEMHIDTDEANAAGADAAQAWATLVTKP

>SAMEA2053874_02730_UniProt_A0A0J5AP62
MNHAMLQRIVEEVAARLRRRARSTATLSVAQLGEADIHSLLCQHASLRIVQVDLPLLEQLTGQRALTAAGCALHEAMAWGVRVQLTLLPALLPALAVKKLARLPLTFSDPPGQPVRLHAASVLTYADVARLRGGYLVLRRRPIITALAREAAVARHVQLIKQE

>SAMEA2053874_02731_UniProt_A0A377UPU2
MHLARVTGAVVSTQKSPSLNGKKLLLVRRVSTDDEHPFPPASGDEVAVDSVGAGVGELVLLCSGSSARHVFSGPNEAIDLAVVGIVDSLSR

>SAMEA2053874_02732_UniProt_A0A5E3DGK0
MAIYTRTGDAGSTSLFTGQRVSKTHPRVEAYGTLDELNAVLSLCVCAAAEEEHRVLLEALQQHIFWFSAELASDSEQPSPGKRYISSEEIALLEQTIDREMARVPALHQFVLPGRCEAASRLHLARTVARRAERRLVELAAEATIRQILLRYLNRLSDCLYALARSEDHADHQRRLVAEIAARYLAASGSPASDAPKAQAGALSFHELHQLTRQAIEHARQLQVPVVVSIVDAHGTETVTWRMPDALLVSSELAPKKAWTAVAMKTATHELATTVQPGAALYGLESHLQGKVVTFGGGYPLWRDGQLIAGLGISGGSVEQDMAIAQAAMAAINVRTHQ

>SAMEA2053874_02733_UniProt_A0A485T7F6
MNTAELETLIRTILSEKLAPAPVSQEQQGIFRDVGSAIDAAHQAFLRYQQCPLKTRSAIISALRETLAPELATLAEESATETGMGNKEDKYLKNKAALENTPGIEDLTTSALTGDGGMVLFEYSPFGVIGAVAPSTNPTETIINNSISMLAAGNSVYFSPHPGAKKVSLTLIARIEEIAYRCSGIRNLVVTVAEPTFEATQQMMAHPLIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIISGAAFDYNLPCIAEKSLIVVASVADRLIQQMQDFDALLLSPQETDTLRAVCLPDGAANKKLVGKSPAELLAAAGLAVPSRPPRLLIAEVQANDPWVTCEQLMPVLPIVRVADFDSALALALRVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARLRRCVLTNGFSIR

>SAMEA2053874_02734_UniProt_A0A5E3DJG5
MHTFSLQTRLYSGPGSLAALQRFSHQHIWIVCDGFLARSPLFERLRAALPASNRVSVFSDITPDPTIHTVAKGIAQMQALRPQVVIGFGGGSAMDAAKAIVWFSQQGGLPVDTCVAIPTTSGTGSEVTSACVISDPEKGIKYPLFHEALCPDMAILDPTLVISVPPTITAHTGLDVLTHALEAWVSPQATDFTDALAEKAARLVFRALPVAVRQGDCVATRSKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTAVIRFNAGEPRAAKRYARLARACRFCPPEAGEQEALQALLAAVETLKQQCAIPTLKGVLQEKYPLFLSRIPAMVPAALADATLRTNPRPADGAAIAQLLESLQ

>SAMEA2053874_02735_UniProt_A0A5E3DH14
MSEAIVPLPDIDAAEIRERVRAAGVVGAGGAGFPTHIKLQARVDTVLVNAAECEPMLKVDQQLMAQQADRLIRGLGYAMTATGAREGIIALKAKYTPAIAALTPRLPEWARLHILPDVYPAGDEVLTIWLATGRRVPPAALPVSVGVVVNNVQTVLNIARAVEQGYPVTRRTLTVNGAVARPLTLTVPLGMSLREVLALAGGATVAEPGFINGGPMMGALITSLETPVTKTTGGLLVLPGNHPLIQRRRQDEHTLLAIARTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNYRQAATPSLLLSALTCSECYVCEGVACPVGISPMRINRLLKRELRAKNLRYEGPLRPADEMAKHRLVPVKRLISKLGLDPWYQEAPLTAVEPEVGCVTLPLRQHIGISAVPCVAPGERVTRGQLLADIPADALGAPVHASIDGQVSAITEQAITLVRG

>SAMEA2053874_02736_UniProt_A0A378FD76
MTQAIGILELTSIARGMELGDVMLKSANVQLLLCRTLCPGKFLLMLGGDVGAVQQAIAAGTARAGEMLVDSLVLANIHPSVLPAISGLNVVEQRQAAGIVETWSVAACISAADRAVKAANVTLVRIHMAFGIGGKCYMVVAGDIADVDNAVTVASDSAGEKGLLVYRAVIPRPHDALWQQLMEG

>SAMEA2053874_02737_UniProt_A0A485TS64
MEPQTPTERMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLGELMRFTACPITRT

>SAMEA2053874_02738_UniProt_A0A5E3AG11
MKRLMLIGPSQCGKTSLTQVLRGETLRYQKTQAIVWTPTAIDTPGEYLENRCLYSALLTSACEADVIALVLNADAPWSPFSPGFTAPMNRPVIGVITKADLAAPPRLQQVRAWLEAAGAEHIFITSALTGDGLDDLLACLNAEEYQ

>SAMEA2053874_02739_UniProt_A0A5E3DHC3
MTYKIMAINAGSSSLKFQLLNMPQGALLCQGLIERIGLPEARFTLKTPTQKWQETLPIADHHEAVTLLLEALTGRGILSSLQEIDGVGHRVAHGGERFKDAALVCDDTLREIERLAELAPLHNPVNALGIRLFRQLLPAVPAVAVFDTAFHQTLAPEAWLYPLPWRYYAELGIRRYGFHGTSHHYVSSALAEKLGVPLSALRVVSCHLGNGCSVCAIKGGQSVNTSMGFTPQSGVMMGTRSGDIDPSILPWLVEKEGKSALQLSQLLNNESGLLGVSGVSSDYRDVEQAADAGNERAALALSLFAERIRATIGSYIMQMGGLDALIFTGGIGENSARARATICRNLHFLGLALDDEKNQRSATFIQADNALVKVAVINTNEELMIARDVMRLALPQARELTVSA

>SAMEA2053874_02740_UniProt_A0A5E3DJA2
MRPGEGKRKGENVAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVEVETGVPRKDERPLSRAMVDQLLAHWGYPPALSQQIRITLHSTIPVAKGMASSTADIAATAVATAHHLGHLLDEPTLARLCVALEPTDSTLFRQLTLFDHNTAATQIACPPPPALDLLVLESPLTLRTTDYHQLPREAGLLANASRLQLAWEKVQQACHCGSPQLLGEAATISAIASQQLLPKPGFDALLQLVESAGLYGLNVAHSGSVVGLLLDRRRHDVEFLQWRLADSNIAAHWPQQHLLAMVPGGVTLQ

>SAMEA2053874_02741_UniProt_A0A5E3DJI1
MALLKSAHGGNIREAAALLGIAPGELLDFSANINPLGMPASLRQAIVDNPGCAERYPDVEYQQLHQALAAHHQLPAAHILAGNGETESIFTLVHGLKPRRAMIVIPGFAEYRRALQTVDCEVVEYALRERDGWQLTDAILDALTPALDCLFLCTPNNPTGLLPERGLLEAIAQRCRALNISLILDEAFLDFMPDQPGFIPLLAQHPHVWVLRSLTKFYAIPGLRLGYLLNADAQAVARLRERQMPWSINAYAALAGEIILQDRAYQRATWQWLQEEGARFYSRLKEITGLTVWPGRANYLFLRCDRPGLDLQYALLRQHVLIRSCANYPGLDSRYFRVAIRSASENDQLLAALQRVLA

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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