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BMC type: PDU1AB


Organism: Salmonella choleraesuis. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

          C4860_05275 (fasta)
             C4860_05280 (fasta)
                    C4860_05285 (fasta) HMM00288_1_pdu PDU1AB (HMM details)
                              C4860_05290 (fasta) HMMacetkin_1 PDU1AB (HMM details)
                                 C4860_05295 (fasta) HMM10662PduV_1_mix PDU1AB (HMM details)
                                    C4860_05300 (fasta) Hp_euts_babyPurple PDU1AB (HMM details)
                                        C4860_05305 (fasta) Ts_dodgerBlue PDU1AB (HMM details)
                                                   C4860_05310 (fasta) HMMPduS_1_all PDU1AB (HMM details)
                                                            C4860_05315 (fasta) HMM00465alcdh_3_mix PDU1AB (HMM details)
                                                                        C4860_05320 (fasta) HMMalddh_1_eutpdugrm PDU1AB (HMM details)
                                                                                C4860_05325 (fasta) HMM01923cobtr_1_pdu PDU1AB (HMM details)
                                                                                  C4860_05330 (fasta) P_babyPink PDU1AB (HMM details)
                                                                                      C4860_05335 (fasta) HMM15953pduput_1_pdu1 PDU1AB (HMM details)
                                                                                           C4860_05340 (fasta) HMMptac_2_mix PDU1AB (HMM details)
                                                                                               C4860_05345 (fasta) H_driedBlood PDU1AB (HMM details)
                                                                                                 C4860_05350 (fasta) H_tan PDU1AB (HMM details)
                                                                                                    C4860_05355 (fasta) HMMpropdeh3_2_pdusml PDU1AB (HMM details)
                                                                                                                   C4860_05360 (fasta) HMM08841dhact_1_pdu PDU1AB (HMM details)
                                                                                                                       C4860_05365 (fasta) HMMpropdeh2_1_pdu PDU1AB (HMM details)
                                                                                                                            C4860_05370 (fasta) HMMpropdeh3_1_pdu PDU1AB (HMM details)
                                                                                                                                          C4860_05375 (fasta) HMMpropdeh1_1_pdu PDU1AB (HMM details)
                                                                                                                                                C4860_05380 (fasta) Tsp_greenishBeige PDU1AB (HMM details)
                                                                                                                                                  C4860_05385 (fasta) H_robinEggBlue GRM4 (HMM details)
                                                                                                                                                        C4860_05390 (fasta)
                                                                                                                                                               C4860_05395 (fasta) HMM10114PocR_1_pdu1 PDU1AB (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_tan
       H_driedBlood
       H_robinEggBlue

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

       Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>C4860_05275_UniProt_A0A2T8TCV5
MRADKSLSPFEIRLYRHYRIVHGIRIALAFIFTFLLVRLFSIPEGTWPLITLVVIMGPISFWGNVVPRAFERIGGTILGAALGLVALRLELFSLPLMLVWCAIAMFLCGWLALGKKPYQALLIGITLAVVVGAPAGDMDTALWRGGDVILGSLLAMLFTGIWPQRAFLHWRIQLAHCVTAYNRVYQAALSPNLLERPRLDKHLQRLLNDVVKMRGLITPASKETRIQKSIFEAIQTINRNLVCMLELQINAHWATRASHFVMLNAHTLRETQQMTQQTLLTIAHALFEGNPQPVLANTGKLNDIAAELRQLMNEQRGDAVAETPIHGYVWLSMETARQLELLSHLICRALRK

>C4860_05280_UniProt_A0A0M0QTE9
METTKPSFQDVLEFVRLFRRKNKLQREIQDIEKKIRDNQKRVLLLDNLSDYIKPGMSVEAIQGIIASMKSDYEDRVDDYIIKNAEISKERRDISKKLKAMGEMKHADVKAE

>C4860_05285_UniProt_A0A2T8TCX9
MRAHYSYLKGDNVAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVAVTAAPPLVNERPLSRAMVERVLAHWQYPAHWSNEIRVDVRSSIPVAKGMASSTADIAATAVATAHHLGHSLDETTLAQLCVSIEPTDSTVFHQLTLFDHNNAATQIACEPPPPIDLLVLESPVTLRTQDYHRLPRQQKLIASSPTLQQAWNLVQEACITQNPLRLGEAATLSAIASQTLLPKPGFTALLSLVEECDLYGLNVAHSGSVVGLMLDRKRHDIARLKGKLAEKKLTRHWPKQHLLKMVTGGVKLQ

>C4860_05290_UniProt_A0A2T8TCZ4
MSYKIMAINAGSSSLKFQLLEMPQGDMLCQGLIERIGMADAQVTIKTHSQKWQETVPVADHRDAVTLLLEKLLGYQIINSLRDIDGVGHRVAHGGEFFKDSTLVTDETLAQIERLAELAPLHNPVNALGIHVFRQLLPDAPSVAVFDTAFHQTLDEPAYIYPLPWHYYAELGIRRYGFHGTSHKYVSGVLAEKLGVPLSALRVICCHLGNGSSVCAIKNGRSVNTSMGFTPQSGVMMGTRSGDIDPSILPWIAQRESKTPQQLNQLLNNESGLLGVSGVSSDYRDVEQAANTGNRQAKLALTLFAERIRATIGGYIMQMGGLDALVFTGGIGENSARARSAVCHNLQFLGLAVDEEKNQRNATFIQTENALVKVAVINTNEELMIAQDVMRIALPATEGLCVPA

>C4860_05295_UniProt_A0A0M0QTD0
MKRLMFIGPSQCGKTSLTQSLRGEALHYKKTQAIEWSPMAIDTPGEYLENRCLYSALLTSACEADVIALVLNADAQWSPFSPGFTAPMNRPTIGLVTKADLAEPQRISLVAEWLTQAGAQQIFITSALNNSGLDAVLDFLNSKEPLCLTK

>C4860_05300_UniProt_A0A0M0QU68
MERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLGEMMQFTTCSITRT

>C4860_05305_UniProt_A0A0M0QF47
MSQAIGILELTSIAKGMELGDAMLKSANVDLLVSKTICPGKFLLMLGGDIGAIQQAIETGTSQAGEMLVDSLVLANIHPSVLPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEKGLLVYRSVIPRPHEAMWRQMVEG

>C4860_05310_UniProt_A0A2T8TCY9
MSAAINSVEMSLSADEIRERVRAAGVVGAGGAGFPAHVKLQAQVEIFLVNAAECEPMLKVDQQLMWQQAARLVRGVQYAMTATGAREGVIALKEKYRRAIDALTPLLPAGIRLHILPDVYPAGDEVLTIWMATGRRVAPAALPASVGVVVNNVQTVLNIARAVEQQFPVTRRTITVNGAVARPLTVTVPIGMSLHEVLALAGGVTVDDPGFINGGPMMGGLITSLDNPVTKTTGGLLVLPKSHLLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNFHQAATPQLLLSALTCSECNVCESVACPVGISPMRINRMLKRELRAQNQRYEGPLNPADEMAKYRLVPVKRLIAKLGLSPCYQEAPLVEEEPSVEKVTLQLRQHIGASAVPTVAVGERVTRGQCVADVPAGALGAPIHASIDGVVSAISEQAITVVRG

>C4860_05315_UniProt_A0A2T8TCZ2
MNTFSLQTRLYSGQGSLAVLKRFTNKHIWIICDGFLARSPLLDTLRNALPADNRISVFSEITPDPTIHTVVQGIAQMQALQPQVMIGFGGGSAMDAAKAIVWFSQQSGINIETCVAIPTTSGTGSEVTSACVISDPDKGIKYPLFNNALYPDMAILDPELVVSVPPQITANTGMDVLTHALEAWVSPHASDFTDALAEKAAKLVFQYLPTAVEKGDCVATRGKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTTVIRFNAGVPRAAKRYARLAKACGFCPAEANDVTAINALIQQIELLKQRCALPSLAVALKEGRSDFSARIPAMVQAALADVTLRTNPRPASAEEIRELLEELL

>C4860_05320_UniProt_A0A2T8TCX5
MNTSELETLIRTILSEQLTTPAQTPAQPQGKGIFQSVSEAIDAAHQAFLRYQQCPLKTRSAIISAMRQELTPLLAALAEESANETGMGNKEDKFLKNKAALDNTPGVEDLTTTALTGDGGMVLFEYSPFGVIGSVAPSTNPTETIINNSISMLAAGNSIYFSPHPGAKKVSLKLISLIEEIAFRCCGIRNLVVTVAKPTFEATQQMMANPRIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIINGASFDYNLPCIAEKSLIVVESVAERLVQQMQTFGALLLSPADTDKLRAVCLPEGQANKKLVGKSPSAMLEAAGIAVPAKAPRLLIAMVNADDPWVTSEQLMPMLPVVKVNDFDSALALALKVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGVGVGGEGFTTFTIATPTGEGTTSARTFARSRRCVLTNGFSIR

>C4860_05325_UniProt_A0A2T8TCW5
MAIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLCACAAADENHRTLLEAIQQQLFWFSAELASDSEQPSPKQRYISSEEISALEAAIDRAMARVEPLHSFILPGRCEAASRLHFARTLARRAERRLVELATEVNVRQVLMRYINRLSDCLYALARAEDSDAHQANIIREVSKRYLAASQPTRSKETTPVALSFHDLHQLTRAAVERAQQLQVPVVVSIVDAHGTETVTWRMPDALLVSSELAPKKAWTAVAMKTATHELSEVVQPGAALYGLESHLQGKVVTFGGGYALWRDGILIGGLGISGGSVEQDIDIAQTAIAAINVGTHQ

>C4860_05330_UniProt_A0A117G1Z4
MHLARVTGAVVSTQKSPSLIGKKLLLVRRVSADGELPASPTSGDEVAVDSVGAGVGELVLLSGGSSARHVFSGPNEAIDLAVVGIVDTLSR

>C4860_05335_UniProt_A0A2T8TCY8
MNGEILQRIVEEIVSRLQRRALSTATLNVAQLRDADCPALFCQHASLRILLVDLPLLGQLADAETDDAAARKIHDALAFGIRVQLSLHSQLLPVIPVKKLARLPLVFTDEHGLPLVLHAGSVLSYRDVALLSRGRVVVHRKCIVTAMARDAANARNIQLIKQE

>C4860_05340_UniProt_A0A2T8TD04
MDKELLQSTVRKVLDEMRQRPIPLGVSNRHIHLSAQDYERLFPGHPISEKKALLQPGQYAAEQTVTLVGPKGQLKNVRLLGPLRSVSQVEISRTDARTLGIAAPLRMSGNLKGTPGIRLVSPFGELELSSGVIVAQRHIHMSPLDALILKVSHGDRVSVAIEGDERGLIFNNVAIRVSPDMRLEMHIDTDEANAAGADNPQAFARLVGPR

>C4860_05345_UniProt_A0A2T8TCX3
MANKEHRVKQSLGLLEVCGLALAISCADIMAKSASITLLALEKTNGSGWMVIKITGDVASVQAAITTGAHFAEQRNGLVAHKVIARPGEGILLAETPPPSVIEPEPEASEIADVVSEAPAEEAPQESELVSCNLCLDPKCPRQKGEPRTLCIHSGKRGEA

>C4860_05350_UniProt_A0A0M0Q0E0
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSAAASVVGEVKSCHVIPRPHSDVEAILPKSA

>C4860_05355_UniProt_A0A2T8TD01
MDSNHSAPAIVITVINDCASLWHEVLLGIEEEGIPFLLQHHPAGDVVDSAWQAARSSPLLVGIACDRHTLVVHYKNLPASAPLFTLMHHQDSQAQRNTGNNAARLVKGIPFRDLHA

>C4860_05360_UniProt_A0A2T8TCZ6
MRYIAGIDIGNSSTEVALARQDETGALTITHSALAETTGIKGTLRNVFGIQEALTLVAKRAGINVSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGVGLGVGITITPEELLTRPADSSYILVVSSAFDFADIANVINASMRAGYQITGVILQRDDGVLVSNRLEKSLPIVDEVLYIDRIPLGMLAAIEVAVPGKVIETLSNPYGIATVFNLNADETKNIVPMARALIGNRSAVVVKTPSGDVKARAIPAGNLELQAQGRTVRVDVAAGAEAIMKAVDGCGKLDNVTGEAGTNIGGMLEHVRQTMAELTNKPSSEIFIQDLLAVDTSVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMAMIAREIEQKLNIDVQIGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGEIIATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFPTPLPPAVFARVCVVKPDELVPLPGDLALEKVRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLILSWHKEFAYGQ

>C4860_05365_UniProt_A0A2T8TD02
MNTDAIESMVRDVLSRMNSLQGDAPAAVPAAGGTSRSAKVSDYPLANKHPEWVKTATNKTLDDFTLENVLSNKVTAQDMRITPETLRLQASIAKDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTKEELLAIADDLENRYQAKICAAFVREAAGLYVERKKLKGDD

>C4860_05370_UniProt_A0A2T8TCY5
MEINEKLLRQIIEDVLRDMKDSDKPVSFNTPAASTAPQTAAPAGDGFLTEVGEARQGTQQDEVIIAVGPAFGLAQTVNIVGLPHKSILREVIAGIEEEGIRARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQQGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL

>C4860_05375_UniProt_A0A2T8TCX6
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGAVTELDGKPVSEFDLIDHFIARYGINLNRAEEVMAMDSIKLANMLCDPNVKRSEIVPLTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAQGGFTDVAQDMLNIQKAKLTGDYLHTSAIIVGDGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNEID

>C4860_05380_UniProt_A0A100PNF3
MSSNELVEQIMAQVIARVATPEQQAIPGQPQPIRETAMAEKSCSLTEFVGTAIGDTLGLVIANVDTALLDAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFGAPIGRACGVIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVTSAREIGKTVLATLGSEPKNDRPSYI

>C4860_05385_UniProt_A0A0M0PZT5
MQQEALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKGISQ

>C4860_05390_UniProt_A0A2T8TD14
MNDSLKAQCGAEFLGTGLFLFFGIGCLSALKVAGASLGLWEICIIWGLGISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGALLAYVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGIPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFTWLAGWGNMAMSGGREIPYFIVPIVAPVIGACAGAAIYRYFIGKNLPCNRCKL

>C4860_05395_UniProt_A0A2T8TCY3
MISASALNSELINKIAQDFAQATGLAVVVVNIHGDEISELFNFTPFCQLMRQHPQHSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDVELVNILNVDDRWQADPELLNEFRNVPEMDYSRVIASADLLKLIVENCLKKQLNFVVIKDNPQQSEANKTTRGPTPHDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAWVNRQRMVSARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAYRQQINENSHPPSI

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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