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BMC type: PDU1AB


Organism: Citrobacter freundii. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

          BEH73_02270 (fasta) HMM10114PocR_1_pdu1 PDU1AB (HMM details)
                   BEH73_02275 (fasta)
                     BEH73_02280 (fasta) H_robinEggBlue GRM4 (HMM details)
                             BEH73_02285 (fasta) Tsp_greenishBeige PDU1AB (HMM details)
                                              BEH73_02290 (fasta) HMMpropdeh1_1_pdu PDU1AB (HMM details)
                                                     BEH73_02295 (fasta) HMMpropdeh3_1_pdu PDU1AB (HMM details)
                                                          BEH73_02300 (fasta) HMMpropdeh2_1_pdu PDU1AB (HMM details)
                                                                             BEH73_02305 (fasta) HMM08841dhact_1_pdu PDU1AB (HMM details)
                                                                                BEH73_02310 (fasta) HMMpropdeh3_2_pdusml PDU1AB (HMM details)
                                                                                  BEH73_02315 (fasta) H_tan PDU1AB (HMM details)
                                                                                      BEH73_02320 (fasta) H_driedBlood PDU1AB (HMM details)
                                                                                            BEH73_02325 (fasta) HMMptac_2_mix PDU1AB (HMM details)
                                                                                                 BEH73_02330 (fasta) HMM15953pduput_1_pdu1 PDU1AB (HMM details)
                                                                                                   BEH73_02335 (fasta) P_babyPink PDU1AB (HMM details)
                                                                                                             BEH73_02340 (fasta) HMM01923cobtr_1_pdu PDU1AB (HMM details)
                                                                                                                           BEH73_02345 (fasta) HMMalddh_1_eutpdugrm PDU1AB (HMM details)
                                                                                                                                      BEH73_02350 (fasta) HMM00465alcdh_3_mix PDU1AB (HMM details)
                                                                                                                                                    BEH73_02355 (fasta) HMMPduS_1_all PDU1AB (HMM details)
                                                                                                                                                         BEH73_02360 (fasta) Ts_dodgerBlue PDU1AB (HMM details)
                                                                                                                                                            BEH73_02365 (fasta) Hp_euts_babyPurple PDU1AB (HMM details)
                                                                                                                                                                BEH73_02370 (fasta) HMM10662PduV_1_mix PDU1AB (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_tan
       H_driedBlood
       H_robinEggBlue

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

       Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>BEH73_02270_UniProt_A0A0D7LVK2
MISASALNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPFCQLMRQHPQHSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDVGLVDILNVDDRWQADPELVNEFRNVPEMDYSRVIASADLLKLIVENCLKKQLNFVVIKDNPQQSEPVRANRSTNPHDSKMKKALRYIDAHLSDELRLEDVASHVFLSPYYFSKLFKKYQGIGFNAWVNQQRMASAKELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAFRQQINVISRGESA

>BEH73_02275_UniProt_A0A0D7LRA8
MNDSLRAQCIAEFLGTGLFLFFGIGCLSALKVAGASLGLWEICIIWGLGISLAVYLTAGISGAHLNPAITIALWLFACFPGRKVLPYSVAQIAGAFGGAMLAYLLYGSLFIEYESAHQMVRGSLESLQLASIFSTYPAAALSVWQAALVEVVITSILMGMIMALTDDGNGVPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFAWMAGWGDVAMTGGRDIPYFIVPIVAPIIGACAGAAIYRYFIGKNLPCNSCKLEENES

>BEH73_02280_UniProt_B1VB62
MQQEALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKGIS

>BEH73_02285_UniProt_A0A0D7LY72
MSSNELVEQIMAQVIARVATPEQQAIPENNHPTRETAMAEKSCSLTEFVGTAIGDTVGLVIANVDSALLDAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYANEAGHIEMQYTARASYALEKAFGAPIGRACGVIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVISAREIGKTVLGTLGSEPKNDRPSYI

>BEH73_02290_UniProt_B1VB64
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGTVTELDGKSASEFDLIDHFIARYGINLARAEEVMAMDSVKLANMLCDPNVKRKDIVPLTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVLQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAQGGFTDVAQDMLNIQKAKLTGDYLHTSAIIVGDGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNELG

>BEH73_02295_UniProt_A0A1J8K8L9
MEINEKLLRQIIEDVLSEMQTSDKPVSFRASTAASAPQAATAQGDSFLTEIGEAKQGQQQDEVIIAVGPAFGLSQTVNIVGIPHKNILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQQGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVTL

>BEH73_02300_UniProt_A0A0D7LRB4
MNTDAIESMVRDVLSRMNSLQGESATPPAASSSAHTAKVTDYPLANKHPEWVKTATNKTLDDFTLENVLSNKVTAQDMRITPETLRLQAEIAKDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTKDELMAIADDLENRYQAKICAAFVREAAALYVERKKLKGDD

>BEH73_02305_UniProt_A0A1J8K1C9
MRYIAGIDIGNSSTEVALATLDESGVLSITGSALAETTGIKGTLRNVFGIQEALTLAAKNAGINVSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGVGLGVGVTITPEDLLSRPADTPYILVVSSAFDFADVATMINASVRAGYQLTGVILQQDDGVLVSNRLTHPLPIVDEVLHIDRIPLGMLAAIEVAVPGKVIETLSNPYGIATVFGLNADETKNIVPMARALIGNRSAVVVKTPSGDVKARAIPAGNLELQSQGRTVRVDVAAGAEAIMKAIGECPKLDNVTGEAGTNIGGMLEHVRQTMAELTNKPSHEIFIQDLLAVDTSVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMAMIAQEITQKLNIDVQVGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGEIIATHLAGAGDMVTMIIARELGLDDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFPTPLPPTVFARVCVVKPDELVPLPGELALEKVRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGTEGPRNAVATGLILSWHKGFAHGK

>BEH73_02310_UniProt_A0A1J8J871
MESNLTTPAIVIFTSADCADIWNDVLLGIEEEGIPFVIQENDSTDVIHNAWLAACQSPLLVGIGCSREKLVVHYKNLPSSAPLFTLTYQQNSHDRRSIGNNAARLVKGIPFRECHS

>BEH73_02315_UniProt_B1VB69
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASAVGEVKSCHVIPRPHSDVEAILPKSA

>BEH73_02320_UniProt_A0A1J8J7W4
MKQSLGLLEVSGLALAISCADVMAKAASITLVGLEKTNGSGWTVIKIIGDVASVQAAISTGVSFADQLDGLVAHKVISRPGDGILSHSVVLEPEPTPEPIPAIPHEEIFVDHAAPEAPQDAELISCNLCLDPACPRQKGEPRTLCLHSGKRGEV

>BEH73_02325_UniProt_A0A0P8HJW6
MDKQQLETTVAKVLDEMRERPIPLGISNRHIHLCAEDYGRLFPNHPISEKKELLQPGQYAAEQTVTLVGPKGQLKNVRLLGPLRNTSQVEISRTDARTLGIAAPLRMSGNIQGTPGVRLVSPFAELELASGVIVAQRHIHMSPLDALILRVSHGDKVSVAINGDERRLIFDNVAVRVSPDMRLEMHIDTDEANAAGADNPQAFATLVTSR

>BEH73_02330_UniProt_A0A0P8IAT5
MNNELLQRIIEEVVSRLKKRAESTLTLSVAQLREINSRTVCCQYSSLHLQQVDLPLLEQIAEGCPVNMSVVTIHDALACGVRVKISLQHRLLPAIPVKKLARLPLEFSDELGRIIFLHPEKLLSYADVAQLRDGVLVLRRRCVVTALAQEAVSLRNVQLIKQE

>BEH73_02335_UniProt_B1VB73
MHLARVTGVVVSTQKSPSLVGKKLLLVRRVSADGELPASPVSGDEVAVDSVGAGTGELVLLSSGSSARHVFSGPNEAIDLAIVGIVDTLSR

>BEH73_02340_UniProt_A0A1J7ZJS7
MAIYTRTGDAGTTALFTGQRVSKTHPRVEAYGTLDELNAALSLCVCVAKNPQHRQLLENIQLQLFWFSAELASESEEPTPEQRYISSEEIAALEAAIDIAMGRVPPLRSFILPGRSEAASRLHFARTLARRAERRLVELSTEISVRHVLMRYINRLSDCLYALARAEDHDAHQNEIIQKVAERYLAAVQPPATKEPTMSLSFQELHQLTRAAVTRAEELQVPVVISIVDANGTQTVAWRMPDALLVSSELAPKKAWTAVAMKTATHELTSAVQPGAALYGLESHMQGKVVTFGGGYALWREGLLLGGLGISGGSVEQDMDIAETAIAAINVRTHQ

>BEH73_02345_UniProt_A0A1J8K1D6
MNTSELETLIRNILSEQLAPAKAEVKGNGIFPSVGEAIDAAHQAFLRYQQCPLKTRSAIINALREELTPHLASLAAESAAETGMGNKEDKFLKNKAALDNTPGIEDLTTTALTGDGGMVLFEYSPFGVIGSVAPSTNPTETIINNSISMLAAGNSVYFSPHPGAKKISLKLIAMIEDIAFRCCGIRNLVVTVTEPTFEATQQMMAHPKIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIINGASFDYNLPCIAEKSLIVVDAVAERLVQQMQSFGAMLLNREEVDKLRAVCLPEGIANKKLVGKSPATLLEAAGIPVPAKAPRLLIGIVHADDPWVTSEQLMPMLPVVTVSDFDSALTLALKVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARSRRCVLTNGFSIR

>BEH73_02350_UniProt_A0A1J8J878
MNSFSLQTRLYSGQGSLDVLKRFTNKHIWIICDGFLARSPLIEKLRNALPADNRISIFSDITPDPTISTVVQGIAQMQSLRPDIVMGFGGGSALDAAKAIVWFSRQFGIEIETCVAIPTTSGTGSEVTSACVISDPDKGIKYPLFNNALYPDMAILDPTLVVSVPPAITANTGMDVLTHALEAYVSTKASDFTDALAGKAAQIVFQYLPVAVSKGECLATRGKMHNASTLAGMAFSQAGLGINHAIAHQLGGQFHLPHGLANALLLTHVIYFNARDPRAAKRYARFAKACHLCPDNANDTAALNALIHHIELLKKQCALPSLVDALKDGKQAWSQRIPSMVQAALADVTLQTNPRVADASAMQELLEELL

>BEH73_02355_UniProt_A0A1J8J9U1
MKTAMTAESTLYDAQTIRERVRAAGVVGAGGAGFPAHVKLQAQVDTFLVNAAECEPMLKVDQQLMAVQAERLIHGVQYAMTATGASSGIIALKEKYQQAINALTPLLPAGIRLHILPDVYPAGDEVLTIWMATGRRVPPAALPVSVGVVVNNVQTVLNIARAVEQQYPVTRRTLTVNGAVASPITLTVPIGMSLRDVLALAGGATVDDPGFINGGPMMGGLITSLDTPVSKTTGGLLVLPKSHALIQRRMQDERTVLSVAKTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNYQQAATPQLLLTALTCSECNVCESVACPVGISPMRINRMLKRELRALNHRYEGPLNPEDEMAKYRLIPVKRLITKLGLSDWYHDAPLAETDYSTDKATLLLRQHIGASAIPCVEQGERVVRGQCVADVPSGALGAPVHASIDGIVSEITEQSITVIRG

>BEH73_02360_UniProt_B1VB78
MSQAIGILELTSIAKGMEAGDAMLKSANVNLLVSKTICPGKFLLMLGGDVGAVQQAIATGTSLAGDMLVDSLVLPNIHASVLPAISGLNSVDKRQAVGIVETWSVAACICAADRAVKASNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEKGLLVYRSVIPRPHESMWRQMVEG

>BEH73_02365_UniProt_A0A0A5SWB1
MERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDSVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLGEMMRFTACPITRT

>BEH73_02370_UniProt_A0A0P8HJX3
MKRIMLIGPSQCGKTSLTQCMRGEVLHYQKTQAIVWSPTTIDTPGEYLENRCLYSALLASACEADIIALVLNADAPWSPFSPGFTGPMNRPVIGLVTKADLANPQRISLVESWLVQAGAQKVFVTSALENTGVDEMFIFLNAKEPSCLTK

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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