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BMC type: PDU1AB


Organism: Escherichia coli. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

        AAW06_03330 (fasta)
                AAW06_03340 (fasta) HMMreg00126_1_mix GRM3B (HMM details)
                           AAW06_03350 (fasta)
                                    AAW06_03355 (fasta)
                                       AAW06_03360 (fasta)
                                               AAW06_03365 (fasta)
                                                  AAW06_03375 (fasta) HMM10662PduV_1_mix PDU1AB (HMM details)
                                                             AAW06_03390 (fasta) HMMPduS_1_all PDU1AB (HMM details)
                                                                        AAW06_03400 (fasta) HMMalddh_1_eutpdugrm PDU1AB (HMM details)
                                                                                AAW06_03405 (fasta) HMM01923cobtr_1_pdu PDU1AB (HMM details)
                                                                                  AAW06_03410 (fasta) P_babyPink PDU1AB (HMM details)
                                                                                      AAW06_03415 (fasta) HMM15953pduput_1_pdu1 PDU1AB (HMM details)
                                                                                           AAW06_03420 (fasta) HMMptac_2_mix PDU1AB (HMM details)
                                                                                              AAW06_03425 (fasta) H_driedBlood PDU1AB (HMM details)
                                                                                                AAW06_03435 (fasta) HMMpropdeh3_2_pdusml PDU1AB (HMM details)
                                                                                                               AAW06_03440 (fasta) HMM08841dhact_1_pdu PDU1AB (HMM details)
                                                                                                                   AAW06_03445 (fasta) HMMpropdeh2_1_pdu PDU1AB (HMM details)
                                                                                                                        AAW06_03450 (fasta) HMMpropdeh3_1_pdu PDU1AB (HMM details)
                                                                                                                                     AAW06_03455 (fasta) HMMpropdeh1_1_pdu PDU1AB (HMM details)
                                                                                                                                           AAW06_03470 (fasta)
                                                                                                                                                  AAW06_03475 (fasta) HMM10114PocR_1_pdu1 PDU1AB (HMM details)
                                                                                                                                                     AAW06_03480 (fasta)
                                                                                                                                                         AAW06_03485 (fasta)
                                                                                                                                                                 AAW06_03495 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_driedBlood

BMC-P(map on tree)

       P_babyPink

(complete list of loci)

Protein sequences:

>AAW06_03330_UniProt_A0A166TBL2
MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQGVIQARESKYIMMHAPTERLDDVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWETMEKLKELGASSILVLPIEKMME

>AAW06_03340_UniProt_A0A166TBN5
MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLLEKGREILHTVHELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEVFYQHHSVTRLKFINGVLGGSWEALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAAASTASQILDEQEAITVFDFKTKLELQISGLGCGYLPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASAWWRDEILANSAIAGVYAKSDDGKSAI

>AAW06_03350_UniProt_A0A166TNP3
MNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNIIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNVFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKHKLMALIDVPQMKPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVREKVVAIFAEAEPFTPSDNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLDYAEQQRWLEHRRQVFTPEFLQDYADELQMLAQQYADDKEKVSLLKALWQYAEEIV

>AAW06_03355_UniProt_A0A166TBS9
MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVDMMNNYAEKLHLQDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIALGTEQEFWMVLPKAEIPNIKAKYTLDGKELTAPISAHKRVGEIELYDRDKQVAHWPLVTLESVGKGGVFSRLSDYFEHKA

>AAW06_03360_UniProt_A0A166TBT8
MNYEIKQEDKRTVAGFHLVGPWEQTVKQGFEQLMMWVDNKNIVPKEWVAVYYDNPDETPAEKLRCDTVVSVADNFTLPENSEGVILTEVSGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAQDGYWDIEMYVAVQPKRR

>AAW06_03365_UniProt_A0A166TBW4
MRADKSLSPFEIQVYRHYRIVHGTRVALAFLLTFLIIRLFTIPESTWPLVTMVVIMGPISFWGNVVPRAFERIGGTVFGSILGLIALRLELISLPLMLVWCAAAMFLCGWLALGKKPYQGLLIGVTLAIVVGSPTGEIDTALWRSGDVILGSLLAMLFTGIWPQRAFIHWRIQLAKSLTEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQTINRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQIVLSLVHALYEGNPQPVFANTEKLNDAVEELRQLLDNHHELKVVETPIYGYVWLNMETAHQLELLSNLICRALRK

>AAW06_03375_UniProt_A0A166TC11
MQRMMLIGPSQCGKTSLTQCLRGENMHYQKTQAIVWSPTTIDTPGEYLENRSLYSALLVSACEADIIALVLNADAPWSPFSPGFTSSTNRPVIGVVTKADLANMEQIFLVKCWLREAGAHNVLVTSAVNNIGVAELFALLHTEEGCR

>AAW06_03390_UniProt_A0A166TC45
MNGELMSFDEQTIRERVQAAGVVGAGGAGFPTHIKLQAQVDTVLVNAAECEPMLKVDQQLMAQQASRLLRGVHYAMKATGASSGIIALKEKYQPAINALTSLLPTDIRLHILPDVYPAGDEVLTIWMATGRRVPPAALPVSVGVVVNNVQTVLNIARAVEQQYPVTRRTLTVNGAVAKPITVTVPIGMSLREVLALAGGATVDNPGFINGGPMMGSLITSLDTPVSKTTGGLLVLPNSHSLIQRRMQDDRSVLAVAKTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNYQQLATPQLLLTALTCSECNVCASVACPVGISPMRINRLLKQELRAKNLRYEGALNPEDVMANYRLIPVKRLVTRLGLTPWYQDAPLSEQVPQPEKVTLLLRQHIGASAIACVQKGDRVVRGQCVGQIPHGTLGAPIHASIDGTISDVTENAITVVRG

>AAW06_03400_UniProt_A0A166TC52
MNPTELEAIIRNILREQLMPSASQMQRNGIFQTVDEAVCAAHLAFLRFQQCPLKTRSAIISAIREELTPRLTELAEESASETGMGNKEDKYLKNKAALGNTPGIEDLTTTALTGDGGMVLFEYSPFGVIGSVTPSTNPTETVINNSISMLAAGNSVYFSPHPGAKNVSLKLIAIIEDIAFRCSGIHNLIVTVSEPTFTATEQMMAHPKISVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADIVKAAEDIINGASFDYNLPCIAEKSLIVVASVAEYLIQQMQSFGALLLNHEQTEKLRAVCLPDGVANKKLVGKSPCHLLEAAGIPLPQKTPRLLIAVVDADDNWVTCEQLMPMLPIVKVSDFDSALTLALKVEDGLHHTAIMHSQNVSRLNLAARVMQTSIFVKNGPSWAGIGVGGESFTTFTIATPTGEGTTSARTFARSRRCVLTSGFSIR

>AAW06_03405_UniProt_A0A166TC58
MAIYTRTGDSGSTSLFTGQRVSKTHRRVEAYGTLDELNATLSLCYCATSIESHRILLEAIQQQIFWFSAELASESEQPSAQQRYIGTEEIATLEKAIDSAMNAVPPVHSFILPGRCEAASRMHVARTVTRRAERRLVELTTEATVRHVLLHYINRLSDCLYALARVEDNVAHQNLMIQEITKRYHEANHTPALKERTMSLTFQDLHQLIRSAAIRADELHIPVVISIVDANGTESVTWRMPDALLVSSELAPKKAWTAVAMKTATHKLADAVQPGAPLYGLESHMQGKVVTFGGGFPLWRDGILLGGLGISGGSVEQDMDIAQTAMAAINAGANL

>AAW06_03410_UniProt_A0A166TC67
MHLARVTGTVVSTQKSPSLIGKKLLLVRRVSADGELPLTPLTGDEVAVDSVGAGVGELVLLSSGSSARHVFSGPNEAIDLAVVGIVDTLSR

>AAW06_03415_UniProt_A0A166TC74
MNHVLMQRIVDEVIFRLKQRAEKTLTLTVSQLREASVHKIVHQYASLQIRYVDLPLLRQLAENNTSDEAVIHLHEALAWGMHIQLSLQHHFLNAIKLKTLARLPLTWCDEQGKPIHLHRGRLLSYADVAPLCAGILVLQRKCCVTALARDAAITRNIQLIRQE

>AAW06_03420_UniProt_A0A166TC85
MDKQTLQETVSQVLDEMRERPIPLGVSSRHIHLSTADYVRLFPEQPISEKKPLLQPGQFAAEQVVTLVGPKGKLHNVRLLGPLRNASQVEISRTDARTLGITAPLRMSGDLNGTPGIRLISPFAELEIASGVIVAQRHIHMSPLDALIYGVTQGDKVAVAIEGDERQLIFDNVAVRVSPDMRLEMHIDTDEANAAGADNPDVFAMQVSLP

>AAW06_03425_UniProt_A0A166TC98
MKQSLGLLEVSGLALAISCADVMAKAASITLVGLEKTNGSGWTVIKITGDVASVNAAIETGASFAGQRNGLVAHKVIARPGEGILSRTTEALNVRVEASETPAATVTSESISCNLCLDPACQRQKGEPRSLCLHSDKREE

>AAW06_03435_UniProt_A0A166TCC9
MESKERAPAIVVIVIGDCISTWNEVLLGIEEEGIPFRIQHIPSGEIIDSAWQAARQSPLLVGIACDREKLIVHYKNLPASAPLFTLMHQQDNHTRRSTGNNAARLVKGIPFKEYHS

>AAW06_03440_UniProt_A0A166TCE0
MRYIAGIDIGNSSTEVALATLNASGEMSFVSSALAETTGIKGTLRNVHGIQEALAQATRKVGINVSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGVGLGVGLTITPQELLTRPADTPYILVVSSAFDFADIATMINASVRAGYQLTGVILQRDDGVLVSNRLEIPLPIVDEVLYIDRIPLGMLAAIEVAVPGKVIETLSNPYGIATVFALNAEETKNIVPVARALIGNRSAVVVKTPSGDVKARSIPAGNIELLSAGRTIRVDVAAGADAIMKAVGECPKLENVTGEPGTNIGGMLEHVRQTMAELTNKPSNEIFIQDLLAIDTSVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMAMIASEIKQKLHVDVQVGGAEAEAAIQGALTTPGTMRPLAILDLGAGSTDASIINQKGEMIATHLAGAGDMVTMIIARELGLNDRYLAEEIKKYPLAKVESLFHLRHEDGNVQFFPTPLSPQVFARVCVVKPDELVPIPGDITLEKVRTIRRSAKERVFVTNALRALRQVSPGGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLLISWHKESVHGK

>AAW06_03445_UniProt_A0A166TCF7
MNTDAIESMVRDVLNRMNSLQDTAPVSAPSHSSTLNAKVSDYPLANKHPEWVKTATNKTLDDFTLENVLSDKVTAQDMRITPETLRIQAAIARDAGRDRLAMNFERAAELTSVPDDRILEIYNALRPYRSTKQELIAIADDLERRYQAKICAAFVREAAELYVERKKLKGND

>AAW06_03450_UniProt_A0A166TCG6
MEINEKLLRQIIEDVLAEMQTSDKSVSFRAPVSSAPDNESFLTEIGEAQQGTQQDEVIIAVGPAFGLAQTVNIIGIPHKNILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGDRLSGSGIAIGIQSKGTTVIHQQGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKKPQELRVTF

>AAW06_03455_UniProt_A0A166TCI2
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGVVTELDGKPASQFDLIDHFIARYGINLARAEEVIAMDSVKLANMLCDPNVKRSDIVPLTTAMTPAKIVEVVSQMNVVEMMMAMQKMRARRTPSQQAHVTNIKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECASSNDQTFTHSDMRRTARFLMQFLPGTDFISSGFSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSIDMPERNIVEDIKFAQEIINKNRNSLEVVKALAQGGFTDVAQDMLNMQKAKLTGDYLHTSAIIVDDGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNEID

>AAW06_03470_UniProt_A0A166TCK2
MNDSLKAQCVAEFLGTGLFLFFGIGCLCALKLAGASLGLWEICIIWGLGISLAVYLTAGISGAHLNPAVTIALWLFAAFPGRKVLPFCVAQLAGAFGGAVLAYFLYSNLFADFESAHNMVRGSAESLQLASIFSTYPAAAINVWQAALVEVVITSMLMGLIMALTDDGNGVPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKIFTWLAGWGEIAMTGGRNIPYFIVPIIAPVIGACVGAAIYRFLIAQNLPVNSVTPKDISE

>AAW06_03475_UniProt_A0A166TCL1
MISAATLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPFCQMMRQHPQLSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLRNDDVDLIDILNVDDCWQADPELLNEFRKVPEMDYSRVMASADLLKLIVENCLKKQLNFVVIKENKPHSGSVRQTRAPNPHDNKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYHGIGFNAWVNQQRMASARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQVYRQQISENVAAETA

>AAW06_03480_UniProt_A0A166TCP1
MKTIKPESIALFCLYSGDINLAKYLAEMVPMTCFVGEDWQQGFLPFKGGAVQSLSDAYTDYSVLLLIAENGASIPESFSHPDGATVILITQHNARLLAGPAGGAVALIHYLNEMCQHRENVANEAFCQTFTQGKRTISQHRLHS

>AAW06_03485_UniProt_A0A166TCP9
MMILVTGGARSGKSRHAERLIGDTPQVLYIATSQILDDEMAARIEHHRQGRPAHWRTVERWQQLDELINADINPQNAVLLECITTMVTNLLFDYGGDKAPEEWDYVAMEQAINGEIQSLIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQQLAAAADEVWLVVSGIGVKIK

>AAW06_03495_UniProt_A0A166TCR0
MQTLADLLNTIPAIDHAAMSRAQRHIDGLLKPVGSLGRLEALAVQLAGMPGLNGVPHVGKKAVVVMCADHGVWDEGVTISPKAVTAIQAENMLRGTTGVCVLAAQAGAKVHVIDVGIDTAEPIPGLINMRVARGSGNIASGSAMSRCQAEELLLEVIRYTRELAKNGVTLFGVGELGMANTTPAAAIVSTIAGRDPEEVVGIGANLPTDKLANKVDVVRRAIMLNQPNPLDGVDVLAKVGGFDLVGMAGVISGAASCGLPVLLDGFLSYAAALAACQMSPAIKPYLIPSHLSAEKGARIALSHLELEPYLNMEMRLGEGSGAALAMPIIEAACAIYNNMGELAASNIILPGNTTSELNS

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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