Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: MIC1


Organism: Rhodococcus wratislaviensis NBRC 100605. Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

        RW1_006_00010 (fasta)
               RW1_006_00020 (fasta)
                 RW1_006_00030 (fasta) H_mocha MIC1 (HMM details)
                       RW1_006_00040 (fasta)
                              RW1_006_00050 (fasta) HMM13419hydrol_1_mic1 MIC1 (HMM details)
                                     RW1_006_00060 (fasta)
                                       RW1_006_00070 (fasta) P_purpleBlue MIC1 (HMM details)
                                         RW1_006_00080 (fasta) H_fuchsia MIC1 (HMM details)
                                                   RW1_006_00090 (fasta) HMMalddh_2_egra MIC1 (HMM details)
                                                         RW1_006_00100 (fasta) HMM06723EutJMreB_1_grm MIC1 (HMM details)
                                                             RW1_006_00110 (fasta) Tdp_denim MIC1 (HMM details)
                                                                       RW1_006_00120 (fasta) HMM02866_2_mic12 MIC1 (HMM details)
                                                                               RW1_006_00130 (fasta) HMM00107alcdh_2_mic1mix MIC1 (HMM details)
                                                                                                RW1_006_00140 (fasta) HMMreg13556_3_MIC1 MIC1 (HMM details)
                                                                                                                   RW1_006_00150 (fasta)
                                                                                                                       RW1_006_00160 (fasta)
                                                                                                                                  RW1_006_00170 (fasta)
                                                                                                                                     RW1_006_00180 (fasta)
                                                                                                                                                 RW1_006_00190 (fasta)
                                                                                                                                                         RW1_006_00200 (fasta) HMM00107alcdh_2_mic1mix MIC1 (HMM details)
                                                                                                                                                                    RW1_006_00210 (fasta) HMMalddh_3_aromic1 MIC1 (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_fuchsia
       H_mocha

BMC-P(map on tree)

       P_purpleBlue

BMC-Tdp(map on tree)

       Tdp_denim

(complete list of loci)

Protein sequences:

>RW1_006_00010_UniProt_X0PL02
LNHAMVRQIAAALAVWSGDDAVRAVVITGAGERGLCAGGDIVSIYHDAKDGGTGSREFWREEYILNAAIANYGKPYVAIMDGIVMGGGVGVSAHGSVRIVTERSMIGMPETGIGFVPDVGGTYLLARTPGELGTHIALTTARLSAGDAIACGFADHFIPSERIGQFLETLSTTTVQDALAQFTEPAPASELLAQQGWIDAAYSADRVTDIVARLRGSGIPEAAKAAEQVRSKSPTACAVTLKSLRRARHAGSLEEVLGDEFRVSVACLSSPDLVEGIRAQVVDKDRNPQWSPATIEEVDDAQVDAFFAPLGDLELGLTPPTTTGDNL

>RW1_006_00020_UniProt_X0QWY4
MTDYDTILLDRKGRVGIITLNRPKALNALNTQLLREIVTAVEELDTDSNIGAILITGSDRAFAAGADIKEMHTKSYMDVYLDDFFSIGDRIAAARTPIIAAVAGYALGGGCELAMMCDILLAADTAKFGQPEIKLGVIPGIGGSQRLTRAVGKAKAMELCLTGRTMDAEEAERAGLLSRIVPAADLFDEALQTATTVAEMSLPIAMMAKEAVNRAFETTLTEGIRFERRVFHSTFATEDQKEGMAAFVEKRTPQFTHR

>RW1_006_00030_UniProt_X0PZA4
MSSGAVGLIETVGLIGAIEAADAMVKAANVDLVGYRTLRNGLVTVMVRGDVGAVQAAVDAGVSAARSTGELATSHVIARPHGDTEDVLAAAIPAV

>RW1_006_00040_UniProt_X0PXN9
MTHRPHVLVTNDDGIDAPGLLALAHTACEQGYDVTVAAPHQQASGSAGGLTMFLVDERIEVSHRRLPGLPGVEAYSVAAHPGMIALAAVLGRFGPVPDLVLCGINEGSNLGAAVLHSGTAGAAMVAGAHGVTALAASLHLDFELEEPPADGSARYWGTAADVVGAILPKILSADAGSVFNLNVPNLPTEETRPLVGAAWTLAGTAPTLLPFIADFDRRASALPVGNLSAPGIKIIDGSDIAEVRNGHPTLSLLQWRGDTAIDWIE

>RW1_006_00050_UniProt_X0PL84
MIFDLDGTLVQTREASWRVFEKISAAHHLGIVDPEQFYEMFANNFFVSLRNLCRDAEHAHAVEADFMRSLGADYAPLLIPGMVDIVKALVPHATLAVLSSNSTEVIRRILRKNSLAYCFSHVFGGDVEPDKTKGIQRFLDDAAQGSGRRCQAFYDESAIGSPVPAQSTAIITDTVGDVEAAVKSGIRAIGVAWGMHTEEQLLTAGAEFVAIWPQEILAHLFGSSTATPACVCPAQPAIGLQMSEAVSAAPAARMQRKAAGAKAMQRRMTSHGVLPHEHQQVQSMPGPAPAPSSHEPGGENELLLAVRLAMP

>RW1_006_00060_UniProt_X0PL07
MIEDIDADFHTPTSDDPTWTETNFFGFYIPEATLNVGVYALFRPNVGVAISTIAMNSKFVQAPWQAEYWDAQHHLPIPEPRNLRDYRLANGLHVVCKEPNRVWDVEFDNGDGVSLAFRYTALADAFDIHDPKQDPIVAKQAEDGVFAWGEAYAGHFDQTGHFEGEVNLRGKNYAVDCVSTMDHSWGLRSEHQGHTMSWLHAHFSKDFAVHGIFDFDPNGGPDAPTELSLQHGYVVDKGELYGLAAGRGRTIREGFFAKSVELDLTDSEGREYELQGFARTSFPWQAGPGTVGYNVLAEWRSGSQRGWGEIQDFIGPQQLCKIYSATPSAGR

>RW1_006_00070_UniProt_X0QWY7
MRLARVVGQVVATAKVPELGGTTILVVEDIDSAPGAVPRQSYAAVDLVGAGQEEVVLVVSGSAARVDAATAGVPVDQAIVAIADTVITHGEVTYSK

>RW1_006_00080_UniProt_X0PZA7
MATTQNTLPARGAGALGLIETKGLVGAIEAADAMVKAANVQLLGHREIGGGLVTVMVRGDVGAVKAATDAGAVAAGKAGEVVSVHVIPRPHDETEGVLSNLARPKGA

>RW1_006_00090_UniProt_X0PXP3
MTVTATLDADLAALADVRAQVSATKKAFDAIEGADQQWLDEIVRAMAKAGYDASEELARMAVDETGYGVYENKIIKNRFNTGFVADWMLERRAVGVLWADEENKVTAVGSPMGVIAAIIPVTNPTATVLFKSLASVKAGNAVVHAPHPRAARCSARAAEIMAEAAVHAGAPENLVSCLRQPTLDATRELMRHGDIRLVLATGGPAMVAAAYSSGKPTIAVGAGNVPAYVDSTVKDLAETATMIVTSKSFDNGTACVAEQSVVIAAPVADQLVQELGRAGATWMTKDQQAALTRTLFDERGGLRANAVGQSAVRLAEMSGFTVPASTKVLAAELDEVGDHVLLSREILGPVLTVYREPDYQAGWRRCREILALGGEGHTVAVHTSDPEVVAKFGELPAGRIVVNTPALFGGMGYSTNVDPSFQIGTGTWSGSICSDNVTPLHLVNIKRIAHEARPWRGVFD

>RW1_006_00100_UniProt_X0PL86
MSPQEVARTLEEAHQRIRSARTDYDGDLRTGIDLGTATCVITVVDAEGMPVWIDFDRTAAVRDGVVVDFAAAAAAVRKLKATAEAELGVELHNAATAFPPCIGEADSRACRFVLEGAGFDEVTLIDEVSAANKTLEVTDGVVIDVGGGSTGVGVFQSGELTALDDRPGGGHHLDLILAGSRGLTVAEAEELKRAGTDDHLAILRPGIERIGSSIRDLTRGAEHLELHLAGGALMLPGADTTISKYLGRSVRAYPHALLITPLGIARYAS

>RW1_006_00110_UniProt_X0PL11
MTGKATLRTYAFIDRMQPQCAAHIAATSPGDPPLAGMAELFVEMAPGNEVFRAADIALKSSGVRPALQIIEREFGLLEIHSEHQAEVLAAGEALLDALGMKETDRIKPVVASTQFITNVHGYQAQLLNKWRKGTLLMPGSSLFVMEVAPAAYVSLAANEAEKAADIDVIEIRAVGRFGRLFLAGSESEVATARDAAVAALESLEGTEETRR

>RW1_006_00120_UniProt_X0QWZ2
MTVFGVDAVEAATESTVAELVVGPKDIVTPLARERARERGITIIVGSPRSGGGTPTPPTVRNGSAPTPVPPEAPAFRRPRSNGFQAPPRPLRPPAPALYRRGAPLDPAVAPAVLHRPRSTPPSQPASSKSVHRVVVVGAGHVGMITAMKLAEANIIEEVVLVDIADGLAAGIALDLTHSTALLGFDTKVRGVTRLADAGVADYVVITAGRARQPGMSRTDLVEVNAGIVGGLARDAAAVSPNTVLLIVTNPLDEMTHHAWQAAGLPAERVIGMAGVLDSSRFQALTGLATQSAPSDITALALGSHGDEMVIPLSQARVAGTSITQTLPQGAVTALVDRARNSGAEVVGLLKSGSAFFAPGASAARMVLAMATESDEVIAATVRARGQYGISDGYVGLPTKLGRGGLKEIVELPLAEDELAAVRTAAARISERVSVLEKATVAS

>RW1_006_00130_UniProt_X0PZB1
MKAVVFADTGRVEVIQVPDPSLIAPTDALVRVHRAAICGTDLHTITHPNGMSRGAVLGHEFAGTILEIGTAVRTFSPGDRVSGADFTACGHCWWCRSGNQWECAERQFFGTGAAFGPALDGAQAEIVRVPHADVVLHSIADDIPYESALFFGDILATGYAAVQRCDVSPGDTVAVVGGGPVGQMASLAAQACSAGPVVLVEPVEDRRAIAHEHGALVAAPDDARRLIDAVTDGRGADAVIEAVGGPRGLDTAFGLVRRRGTVVSVGVHQQPTWPLPVAKSFADELTLRFAIGNAIRDRDRLSGLVAAGAIDPTIIIDRRVSLDDAPAAYDAMTQRRTLKAVIEVP

>RW1_006_00140_UniProt_X0PXP6
MDVADTTDDGPMGSANRLRSLLASLLPENPVAAAEAVVAACGDTRASVLQRQDLDWVVLAGAEDCADQAQLAALECGAGVLRDRAATIGTFAVVLAEPFNEHTRPALDQNLLRQVCVWIELTARATSLTDELAALDDEAEVMRGVTHQILSARDLDQVLLSITNHTLRMSESDICGVFLREGDELRMRSCAGHRVVDTARLVMKRGQGVAGLVFETGKVAKIDSYLHDSTISSDFMSLAEQEATRSALAVPLVVHGDLIGVLEVWRRRYSSFTDRDVRRLVALADLATIAIENGRLYDAQRATVDELESTRISLERQLSLLNRSSTLQHSLIEIVLANTAVTSSVARTVGTDLGCGVAILSATGEVEATYPRTLDTTTLLREVLGRNGTLPHRATRLTAADGKTIWAHPVIAAENQYGAVCLVGGTEDADIMEVACGQAAMVCSLAQLQQRAASAARAEALDQILWDLMEGTAEQRSAARSRTHQMGIRLRGYHRIFYGVLENMDALAAQEGWNTSSSDALRRTMLNGIRSCTQPTPLTLTSVRGNWIVALAPIKDRERSRDLLDELHKITTQAHPDLRISWGVSSARSDPVDYPQAFGEAKTAHAASRRLGTVSLYDELGIVRLLLGSSDNPDLQGFIKEVTEPLLDYDQQSDGSLLKTLRTFFDANCSQKDAAERLFVHPKTLAYRLELIRKLTNLDLSRHADRMRADLALRLLQVTQAVSDLDGESPPSLG

>RW1_006_00150_UniProt_X0PL90
MSSVTVTTEMTRAFSEPGAIDRNVLGGKGYGLVEMTQEGLNVPGGYVISTSACHEYLEHGSMTAELIDEIHARLSELEDKTGKTFGGGPFPLLLSVRSGAPVSMPGMMDTVLNLGLGRDAAIALADVTGDTRFMADVLFRFHGMYAETVLGALETPDRVDLNSLIDGVTATSQPGPVYDTVWQHCQALLRDELDEEVPDDPRAQLIGAVEAVFRSWNTRRAVKYREVHKIPNDLGTAVVVQSMVFGNLDQDSGSGVVFTRNPVTGEPGLFGEFLSASQGEDVVAGIRTPDPVTALRDRLPHVYTELENTCAELERRRGDVLDIEFTVERGILYMLQVRSAKRTAQAAIRIAADLLAEQVVTTAGALSTVSLEQIRQVQRPGFDPDAHARARDDGRVLATGVGAAPGHVVGALYFDSDAAQQAVKEGVTVILARPVTSPTDLHGMIAADGILTATGGSTSHAAVVARALGTTCVVGCGALDIDPAAGTMHVGGQTLVTGDVVSLDGTTGEVILGEIELSEPAAEDDRLTALLELARERSGAQIFARSTTPDQARQAHGRGATGLVAGIDDVLATTGHLDGIITTLREGEISDASAALERAVATEFGRLFAEATVTEFGVRAIDFHADESSELLRTAELFIAHPELALPLGSEEILAAQLRGIAAALQEVTTDLTVHFTVRKIADSREIAALVKLRDTLPGSARVEIGAYLTSPRGIASIDGITTHSDVVWIELRVLQAAVAGISARHLLTSEPLDSYLRRGLITVDPRVEIDDQVGGLVDSVADVVAREPGRRIGIRLTGPVSVELLSSLQQRGFARFAVDGDEVRPSILALGQRER

>RW1_006_00160_UniProt_X0PL15
MTQTLLDKRLYDVLNAVALKKMATAAAVSEIVNLDTDQVREIFAELADSDYLALMGETALPTDASGPVLVDSAAALYGQIRTDPSVLQVADKFEDVNSRFLRTMSSWQQIEVAGRKLANDHSDSAYDAKVISTIERLVSRLEGLLEALSEKDARFRTYIGRFERSLEKVDAGDIAFVSDPTRDSVHNVWFEFHEDLLRTLGRARKE

>RW1_006_00170_UniProt_X0QWZ8
MSIEMTPGLRSTYKQRYEPNDDGLRFQDLVFEGNFVGQEPLRDGILGDKVQKQRAKSKVLEKVSKEDVLVDQFTLDELNDLNNYLAWNIWDVLVMRATEGVSGMIPRQEYEILAFMHQFYRWPEILRMTTDEVGAQGILDIGASARREIGTKVNAVHDWSIGAVGFGMGRCGLLALEAIGPDDYIEESNELLKFMQRIEFGKRQDGYILNSQDRYRCQIHEPDFLEGIINQLETLEPGSPKHESFTRFNAAAELLSFLDHMDCRLGLGDTGPYELPNGNILILRDLFVNEPIFHWSDVCDDAQLPHAYTVALEIDPEILGLQEIRVNDISTTFTRPKNYIPAIVGGAVFAREQWDTPMSDVRTVAIADLGGELPKIQDATLKMYGKISRMCRRDLIWAGQYVYYVDMILPYLRKAGTYEKACDEYQLWEIDQRVSNYYYDIGKRGFAQEVVPQKIFSGQGYLPFGEGADLRRSKYRWL

>RW1_006_00180_UniProt_X0PZB5
MQVVAEGFNAFETQKSPKGEVKFLGSPKDVIEVVRSGKLQDYILLVRGGTTTFLTPALSMGALGVITMSGAPESHLGILSREFQIPCVMTAYLTSSDSRYVVGNTDDAHFEEIAESLIGKTVQLHCDDAEVGRISIVS

>RW1_006_00190_UniProt_X0PXQ0
MNSGAGGVLPSVGPGEILPFSAARHPDKIALVVGDTCLTYQELDRMSDAVAASLRSRGIGARDVCSLYAQNCWEWIVAYHGILKAGAIVNPVNVMLTGPELAFVLSDCEAEALFFGASQAATVANVLGEMSALELVCQLAGDVGEGIGAVTFTELLTAPIDAAPAGNPAPGPADLCSIGYTSGTTGHPKGAMQSQRSVLLNCALTATMHGRNSDDVVVTALPSAHVYGNVAVNSTFLAGGTVVLMERFDAGEALLLLEGDRATLFEGVPAMYSMMLAHPTFETTDLSNLRASTIGGQTFSPELLDRWQTRAPGPMLELWGMTELSGLGTTHAVHAPPVAGSIGVALPGLEIKIGAIDGTEGGVPTGEHGELLVRGPLVMLGYYGRPDTTAEALTDDGWLRTGDVAYVDETGHYFIVDRLKDMIVTAGYNVYPAEIERVIGAHPDVALVAVGGRPDPVKGEIAVAYVVPAPAAQLLPEDIIEHCRAHLAAYKRPREVVFVDALPTTSSGKLMRRKLADLEVADSDQGVVHAR

>RW1_006_00200_UniProt_X0PL95
MKTTAAVLRAAQEPLSLEELDIDELRPREVLVRIVGSGICHTDLGMIATAETDAAPIVLGHEGSGIVTAIGQDVDSIEPGDHVVLSYNFCAECDNCARSLPMHCRDFVPLNLVGTRLDGSSVLRSGGEHVRGHFFGQSSWATYAVANEQNCVRVARNLPLELLAPLGCGIQTGAGAVLNTLNPEEGSSIAIFGTGSVGLAALLGAVVAGCGTIIAVDIQPARLAKAADLGATHTINSAEANVVERIREITGGVGAQYSVDCIGLAGVVRSALECLQSPGVCATVGFQGIPNEISFDQGHLLFGRSLIGVIEGDAIPQEFVTRMIDLYQAGRFPFTELIDTFEFGEINEAIEAVHQGKVTKAVLTFDEPTPVNGVTGE

>RW1_006_00210_UniProt_X0PL19
MLSTEAPSLVLPAEFPMTIGGRTVTAQATAPVYNPATTEMIAEVPVATSDQLDEAVAAAQSAFTGWSATPLAERQAIVAAIGDRLEAHAEEFLALLTAEQGKPRAMAEWEIYGSVAWFREIAKQSLPDEVLEDTAERRVISRHTPLGVVGAIVPWNFPILLAVWKIAPALVAGNTIIVKPSPFTPLCDLKLVELVQDLLPAGVLSAVSGDDELGKWMTAHPGIAKIAFTGSTETGKHVMRSAAGTLKRVTLELGGNDPAIILPDVDPAKVAPQIFWAAFQNNAQFCNAAKRIYIHDDVYEAVRDELVAYARTVVVGDGAAANTQLGPIQNLPQLQKVQEYFDDCTANGYTFALGGRIDPNAGGWFVPVTLVDNPPENSRLVAEEPFGPILPLLRWTEESDVIARANNTVWGLGATVWGEDLEAIERIGRQLEAGTVWLNEVHQYSPHQVFGGHKQSGIGAENSLHGLAEYTNHQTITLNKVPDSVS

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
© www.kerfeldlab.org, 2022