BMC type: GRM6


Organism: Clostridium thermopalmarium DSM 5974. Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

      CPAL_18070 (fasta)
        CPAL_18120 (fasta)
                  CPAL_18130 (fasta)
                     CPAL_18140 (fasta)
                           CPAL_18150 (fasta)
                                            CPAL_18160 (fasta) HMMgre_1_grms GRM6 (HMM details)
                                                  CPAL_18170 (fasta) HMMgreae_1_grms GRM6 (HMM details)
                                                       CPAL_18180 (fasta) HMMreg00072_5_grm1 GRM6 (HMM details)
                                                               CPAL_18190 (fasta) HMM10114PocR_2_grm GRM6 (HMM details)
                                                                CPAL_18200 (fasta) H_robinEggBlue ETU (HMM details)
                                                                     CPAL_18210 (fasta) Tsp_pistachio GRM6 (HMM details)
                                                                        CPAL_18220 (fasta) H_pumpkin GRM6 (HMM details)
                                                                            CPAL_18230 (fasta) HMMptac_3_eut2 GRM6 (HMM details)
                                                                                 CPAL_18240 (fasta) HMM06723EutJMreB_1_grm GRM6 (HMM details)
                                                                                      CPAL_18250 (fasta) HMM02441_04 GRM6 (HMM details)
                                                                                                CPAL_18260 (fasta) HMMalddh_2_egra GRM6 (HMM details)
                                                                                                 CPAL_18270 (fasta) P_clearBlue GRM6 (HMM details)
                                                                                                        CPAL_18280 (fasta) HMM00465alcdh_3_mix GRM6 (HMM details)
                                                                                                          CPAL_18290 (fasta)
                                                                                                                       CPAL_18300 (fasta)
                                                                                                                         CPAL_18310 (fasta)
                                                                                                                                CPAL_18320 (fasta)
                                                                                                                                      CPAL_18330 (fasta)
                                                                                                                                             CPAL_18340 (fasta)
                                                                                                                                                 CPAL_18350 (fasta) HMMreg00072_2_pdugrm EUT2E (HMM details)
                                                                                                                                                       CPAL_18360 (fasta)
                                                                                                                                                            CPAL_18370 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_pumpkin
       H_robinEggBlue

BMC-P(map on tree)

       P_clearBlue

BMC-Tsp(map on tree)

       Tsp_pistachio

(complete list of loci)

Protein sequences:

>CPAL_18070_UniProt_A0A2T0AQ17
MITLYAVSDSIGETAELVAKASANQFNDDIKVERVPYIKTPEDVIKFIDSIEDPRNSAIVSTIVLVDVREFLVERCIEKGINIINILGPCISTLARMSGKQPEYKPGAVWKMDDEYFKKIEAMEFAIQYDDSKSYSGIKNADVVLIGLSRTSKTPLCMYLANKGIKALNIPLMPEVPLPEELYTIDRKKIIGLTIDPLALMEIRKHRLDKVKAGYKSIEYANAERVLEELEYADKVMKKLRCKVIDITKRAIEDTALIVLNSIGYMQDNK

>CPAL_18120_UniProt_A0A2T0ANY5
MKKIVYTVVVFMITITMCALCCSGKTKAFSEKKEIQLEKVAANYCNEALLSFAYPFITKAVYDYYGTNKQFDLFDAKILSIDKPSEAFTYRVIIQINTFTGAHNPPLGTDTITIETSPESTKVINFIHKSE

>CPAL_18130_UniProt_A0A2T0ANX7
MFKKITFCILILLGIVILAMNYKNIFGSPKTVHAVAFKPINMYEAYKLSLLTVKKLNKNAQVCYISSVDDPKLKDMNEGVDGKRRFWNLDFAVPKTDQHYIVTIHDKDVVSCKAVKSVVEEETIMNDEKSILNASNRLKDIKDKYNINPSIGWASGYHFRLNLEDNKYMVTVIGTDNSGNMAKIFVDSLTGNIDSAIHKIRVGGGLFKEKNKIQPLESKIFGAVGAAKADNFQGEEVIAIWGFSGDSESSIKPVSLITADGGQSWKKLKLNYNIARLWFSSGYKKNKTMYIVADSGAYVSKDDGDTWVKTIDISGDIIYGCSINRNNVSIVTQKKLYISNDEGNNWTIKNVPEGAQIIKSDLDEKLIMIKNNQLFIENSGGWIKLSTPLNDDIEGLEVKDNSIIIYNSKKIAILNKNTNKWTMLEVPVQIKNIFIDQSLNGGYSIYIYTPENSLYKLKQGGDFIEWTNEKIDVPQYEQLVTIISGYDKKLYFCTVPQQRWEEIKKGM

>CPAL_18140_UniProt_A0A2T0ANY3
MKLMKLSKIFVMTLVIGVAAITITSAKTVKADVFYELSQTVTGYTGSGYTASQKTPKIGYVAVHPKEPIRYPGDLRALDPLIPFGTMITVLNNNPIPTPTGLRSIFYVEDTGDTNYARYNAGKLTYHWIDVYCGASTSSNIAFANNNLNAIERNYMWEN

>CPAL_18150_UniProt_A0A2T0APB3
MLYNIHELKWDDEILAELNIPKSMLPEVKPSSKIYGETDPSIFGSPIKIAGDAGDQQAALFGQICCEEGMAKNTYGTGCFLLMNTGHKAVESKNGLLTTMAASCTEEVEYALEGSIFIGGAVIQWLRDELRIISNSPESEKYATAVEDSNGVYLVPAFVGLGAPYWDSYARGTIVGLTRGAKKEHLIRAALESMAYQTYDVLKAMEEDSGIKLQALKVDGGACANNFLMQFQADILGTPVQRPEVIETTALGAAYLAGLAVGYWKDKEDIAANCKISRTFEPNMDEEKRARLIKGWHKAVERSQNWEEK

>CPAL_18160_UniProt_A0A2T0ANX5
MNEVLNKNYNLPKSKRIDKLINDLYTVTPEIEAQRAILITESYKETEAYPIIIRRAKALEKILNEMDIVIRDGELIVGNLTKRPRAASVFPEFSNKWLLDEFETLAKRKGDVFLISEDTKSKLKEVFKYWDGKTTNELATELMFKETKEAMNAGVFTVGNYYFNGVGHISVDYAKVLAKGFNGIIAEAEEERERSDKTDPNYIKKEQFLEAVIITSKAAINFAKRFADLAKKLAEETTDNDRRLELLQIAENCKRVPGNPATTFYEALQSFWFVQAIIQIESNGHSISPMRFDQYMYPYFKKELDAKTITMEKAQELLDCLWVKFNDVNKVRDEASTKGFGGYPMFQNLIVGGQTSEGLDATNELSFMCLEATAHTKLPQPSISIRAWSKTPDELLLKAAEVSRLGLGMPAYYNDEVIIPSLVNRGLSIEDARDYGIIGCVEPQKGGKTEGWHDAAFFNMVKVLEITINNGMDNGKQIGPKTGEFTSFKSFDEFMSAYKTQMEYFVKLLVNADNSVDIAHGQRAPLPFLSSMVDNCIVKGKSVEEGGAYYNFTGPQGVGVANVADSLEVIKKLVFEENKVSLATLKDALDTNFGETKANPIAELANSINGVNGIQNLTREDIMKVIEKLIFEEKKISLEDLNHGKDINLGGYGHKESLRQMLINRAPKYGNDIDEVDDLAREVALLYCREVEKYTNPRGGKFQPGLYPVSANVSMGEQTGATPDGRKAGEPLADGVSPISGRDKNGPTAAANSVAKLDHFIASNGTLFNQKFHPSALEGQTGLQNLSALVRGFFDNKGMHVQFNVVSRETLVDAQKNPDKYKNLVVRVAGYSAHFTSLDKSIQDDIIRRTEHSF

>CPAL_18170_UniProt_A0A2T0AP46
MLSHQVDFNKKGVIFDIQRYSVHDGPGIRTILFIKGCPLSCIWCSNPESQCIEPQIMFFSKNCIGCERCYEVCGKGAIDFNLPSRINKDKCVKCGKCVEVCYAEALNMTGNERTVQELLSELKKDNVHYRRSGGGITLSGGEALAQPEFTIELLKGCKASGFHTAIETTAFSNPSVLEKALPWLDLVMLDIKHMNSNKHYAYTGQSNELILNNSKLIAESGVPLIIRVPIIPTVNNDEENIRATANFAKDLKNVSEIHILPYHAFAQNKYESLGYEYNMKDLQPPTREELNNIKKIIEEYGFICKIGGID

>CPAL_18180_UniProt_A0A2T0ANX1
MYKLMIVEDEPLERKALRIILKKEFYNIDIIEDSKNGEEAVLKAKVFKPDIILMDIKMPEKTGLDAQKEIIEFLPNVKTIIITAYEQFSYAQTAIKYGVIDYLLKPIRPIDLKMVVNKALKSIEKVDSIKVKDLKSKDISENTIKAVLKYIDNNYSRDISLNTVANHVHLNSQYLSRYFKQKLGITFTQYVTNLKIEKAKKLLINTDKSITQVSMEVGFSDVSYFSKVFYKNENLSPYKFKCKYKNNL

>CPAL_18190_UniProt_A0A2T0AP01
MDSLKDYKFSDIINIKTLKDIQDKLAKIVNFSAITVDINGIPVCKENNFTPFCKLIRSSPKGCNRCISCDAQASFLAVQDKKTRVYTCHAGLIDCAAPIIVNDIYLGAVLGGQVLLKGQQTRDSIDLNRISQEYEIPLDKLTEAAECIEIVESDYVQNCTEFYTFLANYIAQMGMQTIIQKKLLKESQDKMKLEQYAKKMQLKTIKAQINPHFLFNTLNTIGRMALIEDAPTTEELIYNLSDLLRYNLRNVEEFPKLKDEIDNIKRYLFIQTMRYSDRITYEIEIENSLNDCRILAMTLQPIVENSIVHGLETKKEGGHIKIKAYSVSEKDMVIDVIDNGKGIDSSILNILNIAEDLSDTSFGIGIQNTSNRLKHYFGKNYGLKIKSEPNIETKVSIFIPKLK

>CPAL_18200_UniProt_A0A2T0ANZ1
MGQEALGMIETKGLVAAVEAADSMVKAANVVLIGYEKIGSGLVTVMVRGDVGAVKAATDAGVASAKRVGEVISVHVIPRPHTDVEKILPSFSK

>CPAL_18210_UniProt_A0A2T0ANZ3
MDQDIINQVLEEIRKRVNIESSSNDLSNITPKSCQEIEEKEEKREAKTMYDDVPTITEYVGCTIGDTVGLVIANIDSHIHEKMKLDPKYRSLGIISSRTGAGPHIMAADEAVKATNTEIVSIETPRDTKGGAGHGSLIVFAAEDVSDARRAVEVTLKDVERTFGDVYGCDAGHVELHYTARASLALEKAYGAPIGKAFGIIVGAPAAVGLVMADTAMKTANVDLVTYASPDEGTAHSNEIIITITGDSGAVRQSVIAAREVGLGILKSMKQNPVSTTKPYI

>CPAL_18220_UniProt_A0A2T0ANZ5
MEAVGFIEVRGKLPAIEAADICLKSANVKLIGCELTKGALVTVKIEGDVGAVKSAIDAAKVSDIVKSKLIASLVIPRPAKGISSMLQFDKDKEKEFVEETKDIEGRKEVIDISDAKKNEKPESVKEATCNLCHDSKCGRKRGQPKVLCIHFNKKVENSEGDISYETR

>CPAL_18230_UniProt_A0A2T0ANY8
MKLDETLIKDIVLEVVKKSNVKNRNLCIPVGISNRHIHLTQEDLEVLFGEGYKLTPKKKLGQPGQFASEETVCIAGPKGCFTNVRVLGPVRKYSQVEISKTDAVTLGIQAPVRRSGNILGSASLCVIGPKGMKVFNEKVICAKRHIHMTKKQAEIFGVKDEDLVEVETTGERKVIFRDVLIRVTEDSELEMHIDTDEANAAEVKSKDLVRICGINR

>CPAL_18240_UniProt_A0A2T0ANZ4
MLEIANEIIKSMEERIIDENLNFKNKSISVEKLTENDIKVGVDLGTSNIVITVLDKFNNPIGGALKSASVVKDGIVVDYIGAVNIVRELKERVEKKLKLSLNYAATAIPPGIIKGNVKVIENVVESSGFQLTNVIDEPEAAAKVLHIKDGAVVDIGGGTTGISVLRNGKVIFSADEPTGGTHLTLVTAGNFDISFEEAENYKKDENNYNMVFPIVTPVIEKMADIVLKSVSGYDIECIYLVGGTCCLKGLENVFQKYTSIKSIKPYNPLLITPIGIAMSNEK

>CPAL_18250_UniProt_A0A2T0APC6
MNIEDIVKSIVREILPLLNKKILIFISGGKVNSEILLKALCDFSTVEYSIVMSQEAKLIIDRELLEELNGNIIESTEKIDDCIKNSEFVLIPILTRNTLSKVALGIEDNIVTTGIARSIMLNKEIIAVRDSYDPKNSINISEGFSSNSAYNSMLLEYEKKLESFGVKFIDSKEFKRTIQHKFFNSVPRSSIKEKEDIPAKDTTNKARVEFNSSILTVKDINQILNDGVITLRKNTIITPLAKDYIYNNKIKVEFC

>CPAL_18260_UniProt_A0A2T0ANY7
MEVLDKDLQSVQEVRNLIAKAKRAQDKFKNFSQEQIDKIIRNMVEAVEAEASRLAKMAYEETGFGKWEDKVLKNKFASRTVYNHIKDMKTVGILNEDKEKRILEVAVPVGVIAGLIPSTNPTSTTIYKSIISLKAGNAIVFSPHPSAKECIIETAKILSKAAVDAGAPDGIIGCITVLTMEGTNELMKHRDVSLILATGGEAMVKAAYSSGTPAIGVGPGNGPAFIEKSADVQLAVKRIIDSKTFDNGVICASEQSIVVEECNREKVVSELKRQGAYFLSKEESDKLGKFILRENGTMNPKIVGKSAQVLADLAGISIPYGTKVLISEQSTVGKNNPYSREKLAPILAFYCEENWEKACKRCIELLMNEGKGHTLVIHSNNEKIIKEFALKKPVSRILVNAPGALGGIGGATNLVPALTLGCGAVGGSATSDNISPMNLLNVRRVAYGVRELEDLRENEPKNQCEDNDSVSEKDIENIVKSLLLKLQR

>CPAL_18270_UniProt_A0A2T0AP54
MVLGKVVGTVVSTQKNEKLIGTKLLMVKLIDDNENIIKDKSIVAVDTAGSGIGDTVLIVKGSSTGSIYNDRKIPTDAAIVGIVDTIELDEKYK

>CPAL_18280_UniProt_A0A2T0ANY2
MKKFSIKPNIYFQKSSVEYLKELRGKKALIITDSFMVQSGYINRMLRILENKGIDYEVFSDVKPDPPIEIVAIGVKKMQITKPDVVIALGGGSSIDAAKSIIMIATDIIFKEDNNYTKPLFVAIPTTSGTGSEVTDFSVITFGDKKVPLVDEMLLPDVAILDADFVKSVPSQITADTAIDALTHAIEAYVSMEACDFTDALAEKSIKIIFEYFLRAYRNGEDMEAREKIHNASCMAGVAFANASLGINHSMAHALGGAFHIPHGRANAILLPYVIMYNANLQGNEETRAAKRYSEIAKILGLPSPTVKDGVFSLISAIKIIMKESNTPLTLKQAKIDKREFISKIDSMADTAMKDRCTVYNPRVVTKEDIRKLFVEVYGE

>CPAL_18290_UniProt_A0A2T0AP11
MKPKVAFICVHNSCRSQMAEALGKLFASDVFESYSAGTEKKPQINQDAVRIIKDLYNVDMNETQSSKLLQDIPEVDIAIKMGCNVVCPYLPVKHVEDWGLDDPSGKSDEEFIKTAKTIEEKVKDLAKRIQNKEIKLAP

>CPAL_18300_UniProt_A0A2T0ANZ8
MSETILEKAEGRVSYHDSVEEMMKRIREDGMSNVFDRWTKQEKIRCKFCLQGLSCQLCSNGPCRINDKGEPEKGVCGIGPDAMAMRNFLLKNIMGAGTYSHHAYEAFRTLKATGEGKTPFKIKDVDKLKWMCEKLGIDTNQDINKMAVQLAELLQRQQEIGEDDENLMVEAFAPRKRKELWKKINVYPKGTIHEEQNCVASCLTNVDGSYKSLAAKALRLGIATIYNSQIGLEMVQDILFGTPMPHEVDVDLGIMDPDYVNVVFNGHQPWGGAATILKARTKEVQEKARAAGAKGLRVVGSIETGQELLQRFEIDDVFVGLMGNWLAIEPLLATGTVDVLAMEENCSPPALDQYAEKYQATLVSISTIIDMPGIEHKIPYYPEKVDEMADKLIELAIENFKKRKNKVKPMVPKITQKAIAGFSTEAILKALGGKLDPLVDVIAAGKIKGIVAIANCSTLRNGPQDWNTVNLAKELIKKDILVVAGGCGNHALEVAGLCTLEAANNIAGEGLKEVCNLLKIPPVLSFGTCTDTGRISMVVSALADHLDVDVSDLPIAVTAPEWMEQKATIDGIFALGFGAYTHLSPTPFMTGAPKLVKLLTEEVEGITGGKIALGDDPVEVANNIEAHIIDKRKKMGLN

>CPAL_18310_UniProt_A0A2T0ANZ9
MEVIKLAVSKPKHDINLLLYSLIIATLFGFISWIISKSFEKQFTDILFYVSLGVIIIGLFLMMRRNTSEASLLGLDKNNVQYIANETLEDVKQQQQSTDYHKNFKKHSVEELNFKGIAILLSGVLLMMLNVSLT

>CPAL_18320_UniProt_A0A2T0AP05
MESIIKTLKNEVVFTGALILAIGTSFISIPKLDYIDFKVLFSLFNLMLIVKAFEELKIMDKLAVEILSKYKNSRMGSLILISLTFISSMFVTNDVALITFVPLTLVIGKKTKIEVIDIIIFQTLAANIGSSLTPMGNPQNLFLFSYYKLKAGAFFRITVPLVVMGTIWLFLINLRTKNISLDFELNPISIKDKKKASIYGILFFIIIMSVFNVIDYKLASALTIIVVFFLDRELIMKVDYFLLFTFIGFFLFIGNVSNSTGVHSVMKYVLGSEKKSYFAAILLSQIISNVPCAVLLAGFTENWREILLGVNIGGMGTLIASLASVISYKLYVADFPEKSKGYLKKFTIYNLISLVVFIIINYIIL

>CPAL_18330_UniProt_A0A2T0ANZ7
MKEITKYESLRQQVKAYERIFDTVRVVDPVTKKATIYKDDKDISENITCYSRWLDGNECKDCIIIKALNHKKTFVKIQNNADKMFLIFAVPLELNGDIFALELIKDITDILVFETVYQCESHELRNIVQDLNTLIMKDTLTSLYNRRYIDRILPEEIARCDDKNPLSIAMIDVDHFKSINDTYGHNAGDIIIKKLGQILSNSIRNDTDWAARYGGDEFLICLPNTDNKKAYKVLERIRKNVEKINIKIENIKIKVTVSGGLYTLNNNILAPVDLIKYADDKLYNAKEQGRNRIAS

>CPAL_18340_UniProt_A0A2T0AP04
MIYALILAGGKGTRLYPLSREKSPKQFLKVINDKSFLRNTVDRITPIVNKENIYVVTNKDYIDKIKEELPDINAENIFTEPANKETATCIGLSAVKLLKKDKDAVMLVLPSDHFIQNEKLFIDTLNQAIQIAERKRGLITIGVNPTRPETGYGYIQMGDRVAGDIPTFKVARFTEKPNLEVAKDFLFDGNYLWNSGMFAWRADVFLREMEKYLPKMYKSLMEIYKNVGTDKEEETIEEQYNLIDGISVDFGIMQKTRKAYVIKSEFEWDDIGSFSAMCRFLSNHRGNSVSGNAFMEQSENCFVFGKEKLIIGFGIKDLIIVDAGDVLLVMDKNKDQEIKHLVNILQEQKGYEKYL

>CPAL_18350_UniProt_A0A2T0APC8
MYKILIVEDDLIIAKSIKNHIQSWGFEAECVTDFKDVLGAFVSYNPQLVLLDISLPFFNGYHWCNEIRKLSKVPIIFISSASDNMNIVMAMNMGGDDFIAKPFDLNVLTAKVQAMLRRTYDFAGQTHLLEHKGAILNINDSTLSYQGKKIELSKNENKILGILIENKGKAVSRDTIMTRIWETDNYIDDNTLTVNITRLRKKLQDIGLFDFIETKKGIGYMVK

>CPAL_18360_UniProt_A0A2T0AP00
MKESGFFKLIISYFKLHLKGIILFFLFPSTFALVFYLYNLPIEPVAYAAVLYALISLILFSIDLFQYYKRNKLLQDLKNNTTLNIDKLPDPKDIIEKDYQDLVHAIYKENIQVNYNAEISRSKLIDYYTLWAHQIKTPIAAMRLILQGEESEQNSELSMELFKIEEYVEFVLQYLRIESISSDLILKKYSLDDIVKQAIRKYARIFIRKRIKLNFDELNCEVLTDEKWLVFVIEQILSNALKYTNEGIISIYMDNLSEKTLIIEDTGIGIRKEDLARIFERGFTGYNGRWNKTSTGLGLYLCKQILSKLSHGITIESEVDKGTKVMIDFSTIKVNTE

>CPAL_18370_UniProt_A0A2T0AP64
MAILEVKKLKKIYTSRFGGNHVQALSDVSFSVEKGEYVAIMGESGSGKTTLLNIVASLDKPTSGEVLLNGKSIIDLKEHEISKFRRDNLGFVFQDFNLLDTFSLQDNIFLPLVLSGKSFDEMNSRLKPIAKKLGIDNILKKYPYEVSGGQKQRAAVARALITHPQLILADEPTGALDSHSSDELLHLFNDINKEGQTIIMVTHSTKAASHASRVLFIKDGKVFHQLYRASMSQEEMYQKISDTLTIIATGGVRNE