Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: GRM5


Organism: Muricomes intestini. Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

        EDD59_10371 (fasta)
                EDD59_10372 (fasta)
                          EDD59_10373 (fasta)
                           EDD59_10374 (fasta)
                                      EDD59_10375 (fasta) HMMreg00072_4_pdu1d GRM5 (HMM details)
                                                    EDD59_10376 (fasta) HMM10114PocR_2_grm GRM5 (HMM details)
                                                              EDD59_10377 (fasta)
                                                                    EDD59_10379 (fasta)
                                                                        EDD59_10380 (fasta)
                                                                         EDD59_10381 (fasta)
                                                                          EDD59_10382 (fasta)
                                                                               EDD59_10383 (fasta) HMMreg00455_1_GRM5 GRM5 (HMM details)
                                                                                  EDD59_10384 (fasta) Ts_berry GRM5 (HMM details)
                                                                                           EDD59_10385 (fasta) HMMPduS_1_all GRM5 (HMM details)
                                                                                            EDD59_10386 (fasta) P_darkishBlue GRM5 (HMM details)
                                                                                                EDD59_10387 (fasta) HMMptac_3_eut2 GRM5 (HMM details)
                                                                                                   EDD59_10388 (fasta) H_cyan GRM5 (HMM details)
                                                                                                     EDD59_10389 (fasta) H_evergreen GRM5 (HMM details)
                                                                                                      EDD59_10390 (fasta) H_cyan GRM5 (HMM details)
                                                                                                        EDD59_10391 (fasta) H_darkBlueGreen GRM5 (HMM details)
                                                                                                                EDD59_10392 (fasta) HMM00107alcdh_1_grm5 GRM5like (HMM details)
                                                                                                                          EDD59_10393 (fasta) HMMalddh_1_eutpdugrm GRM5 (HMM details)
                                                                                                                             EDD59_10394 (fasta) HMM03928Haemd_2_grm GRM5 (HMM details)
                                                                                                                                  EDD59_10395 (fasta) HMMaldol_1_grm GRM5 (HMM details)
                                                                                                                                     EDD59_10396 (fasta) HMM10662PduV_1_mix GRM5 (HMM details)
                                                                                                                                       EDD59_10397 (fasta) Hp_euts_twilightBlue GRM5 (HMM details)
                                                                                                                                            EDD59_10398 (fasta) HMMgreae_1_grms GRM5 (HMM details)
                                                                                                                                                              EDD59_10399 (fasta) HMMgre_1_grms GRM5 (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_evergreen
      2x H_cyan
       H_darkBlueGreen

BMC-Hp(map on tree)

       Hp_euts_twilightBlue

BMC-P(map on tree)

       P_darkishBlue

BMC-Ts(map on tree)

       Ts_berry

(complete list of loci)

Protein sequences:

>EDD59_10371_UniProt_A0A4R3KEX2
MAGKSGRTIVNVPDKSWKKTLLCWESMLVVVFILINIFCASISSSYQFSSVLREMPKYLTEMFLLFPMAYILILGEIDISVGAIVCLSATMTCMASNKEWPFIVVVLVSLLVGTICGFVNGLILTKFTELPPMIVTLGTQIVFRGIAEISLGSGGSVSLSNTEGFRMIAGKVGTIPYILFVVAIFAVIFTVVLSKTTFGRSVYAIGSNSRAAYYSGIHVQRIRLIIYTAMGFMAGLAALFLTSVLYGANTTTGNGFEMDAIAMAVFGGISTAGGKGKLQGGIISGLIIICLRIGLGQINMNPQLILIILGALLILAVLLPNIGGEVKLKKKTAAAK

>EDD59_10372_UniProt_A0A4R3KEA5
MKEKKSIWKTITGSREASLLIVLIILCVVISFRSPSFLTLKSISDMLKNNAVIMIMTLGMLGVLLIGGIDISVASTLAFSGMTVGMLLKYQKVENTFLLFLIAIGIGAACGLIIGLVIAKGKVLPIIATMGFMYIYRGMAYMIGNSQWASAENLGNFKNFALGKVLGINNVVLIMIICYIIFFVVMKWTKTGRKIYAVGSNREAASISGINTSNVELMVYTVMGTLAGLCGALAVAVYSSAQPNMLYGKEMDVIAACVIGGVSMTGGRGSVVGAFLGSLILAIIAKALPLVGIDAIAQNTVKGVIILVVVILNVITQRVMDKNNLKGREM

>EDD59_10373_UniProt_A0A4R3KEI5
MSEYVLELKGITKIFPGVKALDNVHFQLKKGEVHALMGENGAGKSTFIKVITGVHKAEEGEMFLDGNKVTFKGPRDAQAAGIAAVYQHPTSYPDLTVAENIFMGHEIIKSGMIQWKKMNEEAAKLLSQLDADFKSTDEMGTLSVAQQQMVEIAKALSTNAQIIILDEPTASLTNSESEKLYRIVDKLRENGVSVIFISHRFEDMYRLASRVTVLRDSKYIGTYDVNEITNTDLIKAMVGREISDLFPKPEVQLGPEVLRVEGLSRVGYFKDISFSVRAGEIVGLTGLVGAGRTEVVESICGITKPDEGKVFLEGKALHIKNPSDAMKHGIILLPEDRQKDGLIMSWGLGRNVTLPTMGKYAKKGFNDEKKEREVAKKLLEDVDTKAITIFDPASSLSGGNQQKVIVAKALGQKMKVVIMDEPTKGVDVGAKAEIYQIMGDLAKQGYAIVLISSEMPEILGMSDRVVAMCNGKVTGELNRDEATQERILEMSMEKSK

>EDD59_10374_UniProt_A0A4R3KEK7
MFTNDPQRARSLRGICGYFYSALSRSEMKQRRIELGLLNSYE

>EDD59_10375_UniProt_A0A4R3KF99
MKLLIADDEELTREGLIASLDWESLGITQIFQADDGIHALDIAHSQKPDIILCDVRMPRMDGIQMVERLEEFLPDTSVIFMSGYSDKEYLKAAIKLKAINYVEKPLDPQEIKEAVLEAKERHQQKIRTRLSENLYSMEKTSHLALLFTKPYKENVEKVTQLADELSLGLTSGSSFTTYIVKLRTNEPDNSLLNNLRNDFSDFLTHYHLQVFYIQLHAIYHVFHIMGSCAPSSTALSAIEQYLEKQFHTFGDFFVGRGETVTGVGKVYHSYTTAVVTLQSSFFFEPGAILYAADIKTPPAGTDVREAADDAAPAFTDALLAGDRGSCTAILQNLYSTYFQNCTLFPNQIKDLYYKLFMSISDSRVKLKLNWEPGENNTQESIMEHLESCFTYQELHQMLVSRTEQFFQSIDSYVPEDTTIFLIKDYISKNYAKDTLSIKEISDHVFLSASYMCTYFKNQTGSTLNQYLTEYRMEKAMQLLSDGRYQIADISSKVGYSNGNYFSKSFKKFTGLSPSKYREKILK

>EDD59_10376_UniProt_A0A4R3KEU0
MKTTFQSIDRFYKSLKLQTKLTITHLVIATIPMIVLAAFFSTKLYDMIVADSIRTEQGASAQTVPLIEDTISQILNVQTQITGQDFYKLTLSADRTEPLSFLAASRSADDFQKKVERVTDGSLVTDVKIYMDVPQDDPAFSEYPVSDTLLPIKQAYGTYWYGIFKGDPTLTKMFCPPFYLSSYEIKHNGDMAYLTKSSMLYNGEHVPCFLAIYFSQEHFNALLKDNMASGSSVAYMVNARDNLVATTDSALSGTYHFSYDEIQEYFRSSNNFILKNVLGEDVYAGFYNIKNTDWYMVVAMPSQPIINKSIEITIAFIFVYIACIVVAFLIATLLSSSITKQLSAVINQMAKARTGPPVALPAPDTQDEIGDLISTYNYMTRVINQLMEEQAKSAEDLRIAEFNSLQSQINPHFLYNTMDMINWLSQQGRSQEVTSAIQKLSRFYKLTLSRKKSLSTIANEIEHVSIYVQLQNMRFHDKIDFLIDVPDYLMEHAIPKLTFQPVIENCILHGILEKESKQGTIVLTGWLEENTVVILISDDGIGMSREKIEDMLNGRGTSSVSGSNIGIYNTHRRLQLMYGLQYGLTYNSVPGRGTEVEIRLPASTPSKYTDKTAKENDAENSLRESHLVQALNLLSRPEINLYEIAEECGYKDLQQFFTEFKEHFGYSPEEYRRHVL

>EDD59_10377_UniProt_A0A4R3KG80
MYERKDLKKPRIGIYSMGLKTYWAQFPGLKERLIEYGEFIAGRVEAFGAEVYYYGLVDCEQEGKKAGEYFNEIHADLILAHSATYVTSASILPIHQICSAPSVVLNLQPTARINYQKTTTGEWLAHCGACPVPELSNAFNRAGIKFRVVNGLLGLNHTPEISMTDEITAERPEARRAWKKIEEWILAAKVKCNLQGARFGFLGNTYSGMLDMYSDFTMFQAQTGAHLQILEMCDLDRHLQSVTGQEITEKRKEIKEFFIISEDAAADPLAQKPADAQLEWSAKVAVAQEKLVKEFDLDALTYYYHGAPGNYYEDIQGGFIVGHSLLTAKGIPCAGEGDLKTCLAMKICDILGLGGSFCEIVTVDYDDNTILLGHDGPFHLEIAKGKPILRGMGLYHGKQGTGVSVEAKVRTGAITNLGCTQTIDGRLKFIISEAESTDGEIMTIGNTQTPVRFKKDPDFYMDEWFAESPTHHFAMSIGHQGSLYEKVADLLEVQSVTLG

>EDD59_10379_UniProt_A0A4V2USK0
MADKAASVLAKLRNKAKASGISYQQCLQLFVQEEFLRKLSKSGYEDNLILKGGLFIYTLTNFESRATIDVDFLLRAASNSIEDVKVLIGKIINTPTGNDYISMTAKGFEEISLQRKYHGISVQIIAQIKNVRVPFNVDMGVGDVIVPCAEERLINTQLPDFEAPIINTYSLESTIAEKFDAILQRFELTGRMKDFYDIYYLARTFDFDGTKLQTAIFETLQRRGTPYDRDSFKRIVALAEDEDMQKRWKYFLKNIKDDTLEFTVVIDEIQTFLEPVFEAIVNEDEWQNSWYTTVIRWR

>EDD59_10380_UniProt_A0A4R3KF55
MLRKKDIEMLRKLFSRHNYIMTTAELTASKLYYADIKLLMDEGLIERVKRGYYHWIEDFGESEIVIINRLFPDAVLCMETALFYYRYSDRNPAEWNFAIDKNVSKLRTKIDYPFIKAYRVEPALVTLGETSGKIDSIDVRIYDRDRTICDVLRNMNKMDKEIFNKAIQGYVKDPKKNIPNLMKYAKVLRVQKRVKELIGVWL

>EDD59_10381_UniProt_A0A4R3KEB4
MCTRFVHNRNDTIVGFNFDIDLAIWTHTVIREEDRFYIGIKMSDGNYHSFHGINKSGNVGTLLYVNGNPK

>EDD59_10382_UniProt_A0A4R3KEY0
MLTLDSTKYTITINTYIDINKYIYVVADYKTICGVIVLLLSEGG

>EDD59_10383_UniProt_A0A4R3KEB3
MLAIERRNEILEKLQAERRVVVSELSQIYDVSEETIRRDLEKLVNDGYAIKSYGGAVINENINIDLPFNIRKNRNVVGKQRIAELISRQVNDSDSIMLDASSTAVYTAKALKDKKNLTVITSSVEIIIELFDVPDWRVLSTGGISREGSFALVGAQTDRMLRTYHVDKTIISCKGLDLAAGITDSDELQANNKKTMLEAGKEKILAVDSSKFGKTAFTTVGMLEDITTIVTDEKPGYEWLQRFEELGIMCIYPE

>EDD59_10384_UniProt_A0A4R3KEJ5
MSKAIGMVEYKTVSAGVVAADAMVKTSDVTIIEAQTVCPGKYIVIISGDLSAVNAAIAASRTQYEKHLINSFILGNPHESIFPAIYGTSKIEDVSALGIVETYDATSIIVAADEAAKTAIVDLIEIRISRGMCGKSYLMLTGEVAAVEAAIEKARAVVSADGMYLDSSIIAHPDPQIRDAIL

>EDD59_10385_UniProt_A0A4R3KEL9
MDIKELSGLLQQNGIVGAGGAGFPTYAKLDERAETIILDCAECEPLLKLHRQLLEKYAQEIIETLHMIGQVVNAKELIIGIKRTYTGAIDALNEVIEDYPEVRLGLLDEVYPAGDEVVLIYEVIGKRVRPGGLPIESGVTVFNVETVYNVYRALNENTPVIDKLVSVTAEVEHPVTVRVPIGTTIEETVKRAGSVTTKNPVYFIGGPMMGFIGRGSQPVTKTTNAVLVLPREHFIIQKNKGNSSIDLKRAAASCCQCSMCTDLCPRYLLGHPIEPHLFMRAATCKDIQKPDIFIDTMFCSSCGLCELYSCMQGLSPRSLMTKYKAGLKESGVRPPQGIAAKPIGIEREYRKVPMQRLMARLDLTRYDKEAPLDESEVPVRKVKILLSQHIGTPATAVVKPGEKVSKGQMIAEPGKGLSVGIHASIDGTVCTVNKKYITIETKEGRAGNE

>EDD59_10386_UniProt_A0A4R3KFA8
MLIGKVKGSVVSTRKCENLVGNKFMIIDVLEHMQTGAKQLIAIDKIGAGIGEYVLVAQGSAARIGSGMPDAPVDAAIIGIIDDGTGLEQ

>EDD59_10387_UniProt_A0A4R3KEU7
MDNSNVALITKMVLETVEKQKSTENIGYIVPVGVSARHVHLTQEHVEVLFGPGYQLTKKKELMGGQYASNELVTIVGLKLRAIENVRILGPVRRKSQVEISATDAIRLGVKAPIRESGNTAGSAAIAVVGPKGALYLDEGCIIAKRHIHMSPKDAMAAGVHDGDTVSVKADNERGTVFNHVQIRVDDSFTLEMHIDTDEANAAKIATGDTVRIIR

>EDD59_10388_UniProt_A0A4R3KG89
MAEEKKPTGEEQAPDTSKPGAAARKKTTAKAPAKTAERVKQATKQAEDIQIKEEKRMSQEALGMVETRGLVASIEAADTMLKAANVVLVGTEKIGSGLVTVMVRGDVGAVKSAVESGAEAAGRLGELVATHVIPRPHNDVEKILPVMK

>EDD59_10389_UniProt_A0A4V2USJ3
MGQAYGFFEIPSVTAAIVAVDIMCKTADVQLVTWEKRLGGRLVTIIIRGDVSAVTQAIDTATANGIKKPVAQVVIASPHEEIIKIINSSANRVS

>EDD59_10390_UniProt_A0A4R3KF64
MAQLALGMVETRGLTAAIEAADAMTKAAEVTLVGTEKIGSGLVTVMVRGDVGAVKAAVETGADAAGRLGELVATHVIPRPHNDVEKILPTV

>EDD59_10391_UniProt_A0A4R3KEC2
MGEAVGMLEVFGLATAFAAADAGCKAGNVHLETFDKNKPANADELPVPLIVMIKFRGSVSDVRAALDAAKRKAEELAGIVAEYEIARPTEDTEKMLKLSGLDKGKPNKIYVEEV

>EDD59_10392_UniProt_A0A4R3KEY8
MEMSSANVEAVVKQVLESMLDKQGILAEGAATKSVSIPKTAHVAMLTGLEHYDIKEYPIPEVGDGDILVKVEGCGICGTDAHEFKRDPFGLIPVVLGHEGTGEIVKMGKNVKKDSAGKDLKIGDKVVTCMIFGDDPEITMFDMNKQNVGASDVYGLLPDDDIHLNGWFSDYILIREGSTCFNVSDLDLKSRILIEPCAVLVHAVERAKTTGILRFNSRVVVQGCGPIGLICIAVLRTMGIENIVAVDGEKKRLDFAKKMGAETSVNFKDYKGIEALAEGVKEAFGGHLADFAFQCTGSPAAHSNIYKFIRNGGGLCELGFFINGGDATINPHFDLCSKEITLVGSWVYTLRDYATTFDFLKRAKGIGLPMDELITHEFTLDRINEAHQTNLKMEGLKIAIVNK

>EDD59_10393_UniProt_A0A4R3KEB9
MSVSEQMVQDIVQEVMAKMQVASEVSGSHGVFSDMNDAIEAAKKAQKIVGRMSMDQRENIISNIRKKTMENAEILARMGVHETGMGNVGHKILKHQLVAEKTPGTEDITTTAWSGDRGLTLIEMGPFGVIGAITPCTNPSETILCNTIGMLAGGNTVVFNPHPAAIKTSIHAINLLNEASLEAGGPDNIACTVEKPTMETSNIMMKHKDIPLIAATGGPGVVTAVLSSGKRGIGAGAGNPPALVDETADIRKAAEDIVNGCTFDNNLPCIAEKEVVAVTSVVDELMHYMVNEQGCYLASKEEQDALTAVVMKDGRLNRHCVGRDAKTLLGMIGVSVPDNIRCIVFEGSKEHPLITTELMMPILGIVRAKDFDDAIEQAVWLEHGNRHSAHIHSKNVDNITKYAKAIDTAILVKNGPSYAALGFGGEGYCTFTIASRTGEGLTSASTFTKRRRCVMTDSLCIR

>EDD59_10394_UniProt_A0A4R3KEK4
MNEQDITSAVKAVLDQMKEGSHPEKGHVCRCSGQKMTLKTANALIERVKERASQLGVNVVIAVSDQAGRPVAVQCMDEAYIASFDIAVNKTFTSASLKMSTEALSHLSQPGQPLYGIQFTNGGKIVIFGGGEPLEAEGKIIGALGVSGGSAEEDTAIAAYGREVFKEVLKCL

>EDD59_10395_UniProt_A0A4R3KEM9
MQNEYEIKKQMCEIGKRVYNRGMVAANDGNFSVKLNDNEFLCTPTGVSKGFMTPEYICKVDANGNVLQANKGFKPSSEIKMHMRVYKERPDVNAVVHAHPLYATTFAICGIPLTQPIMPEAVIALGCVPIAKYGTPSTEEIPDAVEEYVQSFDAVLLENHGALTYSNTLLNAYHKMESVEFYARLLYQSRMLGEPQEFNQAQIDRLYEIRRQMGLPGKHPANLCPNAKAGKQSCHSCAGSCGTGKDAAAGSTSDADLVASITKKVMAQLGM

>EDD59_10396_UniProt_A0A4R3KFB7
MKKIVLMGRSECGKTTLTQALRGEKIQYHKTQYVNNFDVIIDTPGEYAQTKNLGHALALYSYEADVVGMLLSATESYSLYPPCCTAMCNREVIGIVTKIHDEKANVERAAKWLRLAGCKKIFYVDSKNYEGVPEILEHLKEKGDVLPWEIDESEAAG

>EDD59_10397_UniProt_A0A4R3KEV1
MSHEQIPERIVQELVPGKEITIAHLIASPDITLYEKLGLDPRSEYSKSAIGVLTISPAETAIIAADIAIKAAGIELGFVDRFSGTLIVTGTISETEAAIRAVLKYVKDKMDFSVCEITRT

>EDD59_10398_UniProt_A0A4R3KG97
MDDYMRTKGRIFDIQRYSIHDGNGIRTIVFLKGCLLRCRWCCNPESQRHEIETMMVQGEPKVIGKDVTVEEVMETVEKDRTYYRRTGGGLTLSGGECLCQPEFATALLRAANEAGIHTAIESTACVPYEVIEGLLPYLDQCLLDIKHMNPAKHKEYIGRSNELILENAMKIAGSGMTELSVRIPVIPGFNDTIREIHNIAEYAKKLGNVRRLHLLPYHRLGQDKYEGLGRAYLMGGVEPPVNKKMETLLQAAEQTSGIECQIGG

>EDD59_10399_UniProt_A0A4V2USJ9
MGLYSYDSSDIPKSDRIPKLIEDLYAGMPKIESARAVLLTESYRQTEDEPVVIRRAKAFQHILENIPIVIRDQELIVGSTTTGPRGCQTYPEFSYDWLEEEFDTVAARPADPFYISDKTKAELKEVNAYWKGKTTSELATYYMEPETLLAIDHGIFTPGNYFYNGVGHVTVKYGEVLAIGFSGIKEKAVRQKAKLSLTDGDYQKRSRFLEAVMISCDAAVTYAKRYAKLALKEAGQCSDAVRKRELLQIAQNCANVPEKGATGFYEACQSFWFVQQLLQIESSGHSISPGRFDQYMYPYYRKDIDGGRITREYAQELIDCIWVKLNDLNKCRDAVSAQGFAGYSLFQNLIAGGQNEDGVDVTNDLSFMSIQASMHVFLPQPSLSVRVWNQTPHEFLIKAAELTRTGIGLPAYYNDEVIIPALVSRGLTLQDARDYNIIGCVEPQKSGKTEGWHDAAFFNMCRPLELVFNNGMDKGVQLGPKTGKVEDMKTFEEFYNAYKAQMDYAIKLLVNADNSIDVAHAERCPLPFLSSMVDDCMEKGKTVQEGGAVYNFTGPQGFGIANMADSLYAVKKLVYDEQKVTMKEMKEALATNYGKGLSEEDVAFMTAEAAGSMKEAGQTVGEKEVSAILKMVVAALKSPEVKKNGDRILKLIEEVPKFGNDIPEVDAFARDVAYTYTKPLQNYKNPRGGIFQAGLYPVSANVPLGAQTGATPDGRLAYTPVADGVSPSAGKDVNGPTAAANSVSRLDHYIASNGTLFNQKFHPSALSGRRGLENFVGLIQSYFDQKGSHMQFNVVSRETLRDAQKHPEQYKHLVVRVAGYSALFTTLSKSLQDDIIRRTEQGF

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
© www.kerfeldlab.org, 2022