Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: GRM5


Organism: Lachnospiraceae bacterium. Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       DIS68_07785 (fasta)
              DIS68_07790 (fasta)
                DIS68_07795 (fasta)
                   DIS68_07800 (fasta)
                          DIS68_07805 (fasta)
                            DIS68_07810 (fasta)
                             DIS68_07815 (fasta)
                                   DIS68_07820 (fasta) HMMPduS_1_all GRM5 (HMM details)
                                       DIS68_07825 (fasta) Ts_berry GRM5 (HMM details)
                                             DIS68_07830 (fasta) HMMreg00455_1_GRM5 GRM5 (HMM details)
                                                                  DIS68_07835 (fasta) HMMgre_1_grms GRM5 (HMM details)
                                                                   DIS68_07840 (fasta) HMMgreae_1_grms GRM5 (HMM details)
                                                                     DIS68_07845 (fasta) HMM00107alcdh_1_grm5 GRM5like (HMM details)
                                                                       DIS68_07850 (fasta) H_darkBlueGreen GRM5 (HMM details)
                                                                         DIS68_07855 (fasta) H_cyan GRM5 (HMM details)
                                                                            DIS68_07860 (fasta) H_evergreen GRM5 (HMM details)
                                                                              DIS68_07865 (fasta) H_cyan GRM5 (HMM details)
                                                                                   DIS68_07870 (fasta) HMMptac_3_eut2 GRM5 (HMM details)
                                                                                     DIS68_07875 (fasta) P_darkishBlue GRM5 (HMM details)
                                                                                         DIS68_07880 (fasta) HMMPduS_1_all GRM5 (HMM details)
                                                                                               DIS68_07885 (fasta)
                                                                                                        DIS68_07890 (fasta)
                                                                                                                 DIS68_07895 (fasta)
                                                                                                                    DIS68_07900 (fasta)
                                                                                                                                    DIS68_07905 (fasta)
                                                                                                                                                  DIS68_07910 (fasta)
                                                                                                                                                               DIS68_07915 (fasta) HMMreg00072_4_pdu1d PDU1D (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_evergreen
      2x H_cyan
       H_darkBlueGreen

BMC-P(map on tree)

       P_darkishBlue

BMC-Ts(map on tree)

       Ts_berry

(complete list of loci)

Protein sequences:

>DIS68_07785_UniProt_A0A3D4KYC7
MIDKLGLYFSYPFVRYALIVGVLIALCSSLLGVTLVLKRFSFIGDGLSHVAFGAIAVAAVFGLSDDMMLVMPVTIISAVLLLRTGQNTRIRGDAAIAVLSVSALAMGYLLMNIFSTSTNLAGDVCSTLFGSTSILTLRLPEVVLCIVMSVVVVTVFIVFYNRIFAVTFDESFARASGTRAGTYNLLIAVIIAVVIVLGMKLVGSLLVSALIIFPALSAMRVFRSFLSVTLCSAILSVLCAVSGILISILASTPVGSTIVAVDILAYLCFMAAGAAKQGR

>DIS68_07790_UniProt_A0A3D4KXJ5
MSEIICRDLTLGYENSILVRGLDFETKPGDYLCIVGENGAGKSTLMRTILRLQKPLSGEIIYGDGLTPSEIGYLPQQTLVQRDFPASVREVVLSGRQAKLGRHAFYSAEDKRCAEENMERLGIADLAKRCYRELSGGQQQRVLLARALCATSRMILLDEPVSGLDPGATMEMYQIISRLNKEGISVVMISHDIRSSVEYASHMLHIGSEIFFGTVEEYRKSRVGRIYLEKGGSTDAAGDGKEADHDR

>DIS68_07795_UniProt_A0A3D4KXI0
MTLLIAVFAAVTCTAIWYTSEKARTLKVGLLCWMFWGASLMWLVDALTEYSELRAAYFTPEPADMLNDAFLGLSVLALALVIWIVYVLAKDPLGVVRKSVSDEVSGKENTGAQEA

>DIS68_07800_UniProt_A0A3D4KXC7
MACFTVPAAEAIMTKAAEKVLHADKEQNVFVRRLPWLTKMLAGGSVLLAFEHVWHGEVQPFFPFLTAMGSAEDAAEMLHEMGTVGVGMAVLVSVCWAGMVLVSERIRKREPEAATDKGGVQE

>DIS68_07805_UniProt_A0A3D4KYK7
HDHDHVHATLSDVMSTIQGMNIPENVKRDAGEIYRIIADAESRVHGEPVGEIHFHEVGMYDAIADVVSVCLLMDRIKPDRVVASPVNTGSGTVHCAHGVMPVPAPAAALILTGIPVYNDEIKGELCTPTGAALLKYYVNEFGNMPLMRTERTGYGLGHKDFPRANCVRVMLGETEEADKTDRVTGLSCNVDDMTGEELGYAIDRLMEKGAKEAYVVPVVMKKSRPGYELNVLCDTSDREMMVGEIFRLTSTIGIRETLYSRYVMDRTTGEMYTSYGRVRVKESSGYGVTRRKFEYDDLKAIADKEGIGIGQARQMIDKG

>DIS68_07810_UniProt_A0A3D4KXZ8
MCQRGIGGEHRQRIRCGISGESHKPYGEEVKMKVMYIDCGMGAAGDMLTAALLELIPDREDFVRKLNGIWRDGVETVAKSEKRCGIRGTLVDVLVDGRA

>DIS68_07815_UniProt_A0A3D4KX80
FGGLSALLAMLNSCASGVSVVNIDNGFGAGYQASLINHTGKK

>DIS68_07820_UniProt_A0A3D4KWX3
AGNVTVKEPAYLMGGPMMGRFGNEDTVITKTTNAIIILPKDHKLVLQADKDMKTEKRRASSACCQCRTCTDLCSRHALGHPIEPHRIMRAVANSDTTDLTPFLGAMYCSGCGICEKYACPQGLSPKTIIQEFKQALRAGGVPVEKKKAAPVSEGREERKVPVHRLAHRLGLHAYDREAAINDELTECSVLSVPLSQHIGAPAKAAVAAGDRVSRGQIIAAAAEGLSVNIHSPIDGTVRSVGDREITLVKDNR

>DIS68_07825_UniProt_A0A352CQ18
MAKAIGMVECNTVSSGFKAADDMAKTAEVELMQAEVTCPGKFVILISGEISAVKASVDRAAYTYGDKVIDTFVLGNPHESIFPAIYGTAPRTDIDALGVLETYDVAALIVAADVAAKTAIVDLLELRLAKGMCGKSYMTLTGSVSAVQAAIDSAKAAAGDKGMFLDEAVIPRPSEHLMPFIF

>DIS68_07830_UniProt_A0A352CQ17
MLSAERRNLILREVHEKKKVFVNELSRRFEVSEETIRRDLDKLDKDGYVIKGYGGAVLNEDYGTDLPFNMRCEINPEKKSQIAELAVEEIEPGDHIFMDASSTTVFLSRAVRKKETDKLTVITNSIENAVTLGNIPGAQIMLTGGILKFDSMSLTGGRALEDIRQYHMNKAFISCNGLDIDRGVTEGNDEVAGVKQAAINASDRVYLVVDSEKFKRASFAQVCSLDRVDVLITDKKPDARWLEVLEQKNIRTVYPG

>DIS68_07835_UniProt_A0A3D4KYE3
MRDFDSTPAAKSERISRLVKHLFEKMPEIEPARAELITESYKASEGLPETTRKALAFDHILKNLPIIIRPEELIVGSTTLAPRGCQTYPEFSYEWLEAEFDTVETRTADPFYISEDTKRRLRAVNPYWKGRTTSELARSYMAPETLRAMDHNFFTPGNYYYNGVGHVNVHYDRVINEGLRGIMEQTSEVLSRLCVGDAEYATKRRFLEAVLISCNAVIEYARRYSALAKEEAEKERDPKRKAELIKISEVCAHVPEYPARSFREACQAFWFVQQTIQIESSGHSISPGRFDQYMYPYYAKDIAEGVITRDEAQELIDCVWVKLNDLNKCRDAVSAEGFSGYSLFQNLIVGGQTPDGRDATNDLSFMCLDATKHVFLPQPSISIRVWNGSAKELLMRAAEVTRTGIGFPAYYNDEIIIPSMENRGIPLEEARNYCIIGCVEPHVPGREDGWHDAAFFNMVRPLEMVFYNGMDKGEEASIHTGDVDSFTSYEEFKAAYKKQMEYNIALLVNADNAIDRAHAERSPLPFESALIDDCISRGVPLQSGGAVYNFTGPQGFGIANVADSLYTVKKLVFEEKKFTLKELARAMQMNYGKGFDEITAREVAGQVAKAVSEAGGEVTEQLISDSVKAVLTMEIDPKEKARYEEIWQMIDDLPKYGNDIDEIDTIAREAAHFYTRPLPQYSNPRGGIFQAGLYPVSANVPLGGQTGATPDGRLAHMPVADGVSPTNGKDLNGPTASCNSVARLDHSDASNGTLFNMKMHPTAMSGEKGLEDFISLVRGFFDQKGMHMQFNVVDKETLLDAQAHPEKYQGLVVRVAGYSALFTTLSKSLQDDIIRRTAQGQFR

>DIS68_07840_UniProt_A0A3D4KXK5
MSDYSYLDVKGRIFDIQRYSIHDGIGIRTIVFLKGCALRCRWCC

>DIS68_07845_UniProt_A0A3D4KXJ0
PKAHSNIYKFIRNGGGLCELGFFVNGGDAQINPHFDLCSKEINLVGSWVYTLRDYGTTFDFLKRAKGIGLPVSELITHRFPLQDINEALKTNLAMSGLKIAVVIN

>DIS68_07850_UniProt_A0A3D4KXE0
MEHQAVGLLEVYGLVCAFLAADAGCKAGNVTLEVFDKNKPANADELPVPLLVTVKFRGTVSDVREAMAAAEQVARETTGIVCTHIIPSPTEDTEKMLTISALDKD

>DIS68_07855_UniProt_A0A3C0XZI6
MAQSLEALGMVETRGLTAAIEAADAMTKAAEVTLIGTEKIGSGLVTVMVRGDVGAVKASVEAGTAAASKLGELVATHVIPRPHNDVEMILPKFKG

>DIS68_07860_UniProt_A0A3D4KY13
MNKAYGFIEITGVVAAIDALDVMCKAAEVELATWERKLGGRLVTLVVEGEVEAVKTAVQAATEGGHIRRPVAWGVLPAPHEEIRKIVALSASRFKGKGEAASGSKMLGQDPPDFNIKEQMNK

>DIS68_07865_UniProt_A0A3D4KX92
MAQSLEALGMVETRGLVAAIEAADQMCKAANVTLIGTEKIGSGLVTVMVRGDVGAVKSSVEAGSNAASSLGELIATHVIPRPHNDVEMILPKLKA

>DIS68_07870_UniProt_A0A352CQ21
MDSTNVEYITRLVIQALGENSAEGRMSVPVGVSARHIHLCQADVERLFGQGYQLTKKKDLMGGQWAANEQCTLVGLKLRAIENVRILGPVRKASQVEISATDARTLGVNAPLRESGDLAGSAPIALVGPKGAIYLQEGCIVAARHIHMTPEEAAGAGLKDGDYVSVKMGNERGAVLDKVKIRVDPSFSLEMHIDTDEANACQIKQGDTAMIM

>DIS68_07875_UniProt_A0A352CQ20
MIIGTVMGSIFSTRKSEKLVGNKFMIVRPEKTMNTGTDLIAIDIIGAGIGEKVLVAQGSAARIGCDMPDAPVDAAIVGIVDDGQDGMEIIGS

>DIS68_07880_UniProt_A0A3D4KWY4
MNLEELKEITRKSGVVGAGGAGFPSYAKMTDKADTVILNCVECEPLLKLHRQLLALHAREIIGMLDEVRAAMGAAEAFIGIKSEYKETINAVDQVIGDYPKVRIHELKAAYPMGDEVVLIYEVTGRVISPGGLPIDENVVVYNVETMYNIYRAVHEGHPVTDKLVSIVGEIDTPKTLRLPLGMRVGDAVKAAGNVT

>DIS68_07885_UniProt_A0A3D4KYE5
KRQLLNILHVMYLYNKIKANPGMEFTPRTFIFGAKAAAGYKIAKLTIKLINNVAEVVNNDASIGGKLKVVFIEDYRVSNAEIIFAAADVSEQISTASKEASGTGNMKFMLNGALTIGTMDGANVEMAEEVGEDNMFIFGLSSDEVIAYENNGGYNPMDIFNSDQDVRDVLMQLINGFYSKNDPELFRDIYNSLLNTQSTSKADTYFILKDFRSYAEAQERVEQCYKKEKEWAHKAILNVAAAGKFSSDRTIREYVDELWHLDKIDLRKASHRRSAAK

>DIS68_07890_UniProt_A0A3D4KXL4
MKGNLVDKQRMSEDPGLTQRSKPSGKIRGLKRAVRWLALTDLLLFVLCALLMIRAFNLQRENASLKSDNEALQIQSHDTVPIPETAAMEGAEVPASTSSVSSTDADNATLMAVRGYAEQGKSFLFTLKQLFPKQFVLADEGTFHFVDIDPNLRPYTYDNDMIALSSNGIITYEDDEVVTSYGIDVSQHNGPIDWEQMKAAGYRPDFVYIRAGIRGYSSGRLVYDEQVSANIAGARSVGAETGVYFVTQAVDEAEAREEAHFVLDLINDKGTELPVVLDVEKVESYDTEPRTKNLSPQEYTANVLAFADEMKQNGLDTVVYGNGKTFMLMLDMAMLDGTDIWFADYVAEDDYIPYFPYKFNIWQFSSQGKVPGVTGDCDLNIRFE

>DIS68_07895_UniProt_A0A3D4KXK0
RSVFALRAAVSSRCFRRSVLLHLSALFYFVYSIDSMSSLGTDIVPMMLLIYIFSLWCDLHDAGESDPVPYGLLALLGIFDITVKLSVATISLLAVAVLIWLIKEKKVREIAFFSCFSLITVIPYFIRNVITTGYLLYPMESLDLFDLDWKVPREVAYWDRAEIVMFGRLFDGTLEDSIGLPLAGWFQAWFSRIDQVPRIMLLLCLFFGAGALIYSVRCIRGKKGFREIFIMAVAVCGMLYWLLSAPLMRYGLATILIALSVMAGTVLSDTKRVGQMAVLLGVFTLLYVPVKINTDYLTENENLIWAAPFYQHECKELTMTDRSGAPHTIYMPVEGDQGGYDVFPETPYYSDEFVRMRGDSFGDGFIGSGF

>DIS68_07900_UniProt_A0A3D4KXE9
VIISGIAFTAVFAGFWHLLHAVDLSAFIFLFAAGAVILFVLRRETADLIRPLISPGGMRLTLVLLLSVFVVISAAEAHDWDTYLYHAQAVRWMETYRVVPGLANFHKRFGYNSALMPLHALMSMSFTGHPIHIVNGFVSFIIIS

>DIS68_07905_UniProt_A0A3D4KYM9
MIKIDFRKRYSELAMGCAVLLEILVLFYYNIFHLRDALDHDFAMVMRHVMEMADRHTLFLPYWNYMSQGEMDESSLIALPVYMLTKNIYLGYAIAGIINVLLWAWVVWRLLSIAGLDRRYRLLALGLIFTAYDFGMLEYTNMLFFGGAYYVYKVLTPLMLLIIMLTDWKGRYRIPDIIIAVLYHILLLFIGMASGTYVLLCGLAPVLICFIIPSVLGVDKGRRKQWLLFTVTSIAVSLIGLAIGIRGGIAAFTYTVRSLDDALDTLYSTVKDVLILLRALTPYEERVTSLRGIIGLIRLVIAGFILIFGLASVSGAFGTGTYRRVRDGGEDSLSDGGYKPQLIKDSLISIALWTFMILALTISQPRYHIMGVVPLMICAAMNFSDVMEKDRSTVFPQWFMTLIAAVLIYVCLYTGFIAETEYFHGQDANLHTIDDVTAMMRVYDVNTVFNIDSTDMAPKLRVSYPSGVFETYITEDGSVNNHIFYYTEWDRSAFTDRNFIIAKEGEFDLCPDHIRDSYELLGESGEYTIYFSEKNPIDGMAGLPLDERSVDLVTAPGYEVSGLIDAEGYLHTSDKGEIVRSPVLNSPLDPVFTRSDPRRYRMLCNYEAVPGSSAVLTIYRDGEPVAECVMDPKDSSAVADFEGGPGEITYVIRKEDDTPVTIKEIEFEVLE

>DIS68_07910_UniProt_A0A3D4KY22
MVKFENMKDFKPILVLAIIFAALCIFIPSENEGPSPAPAGEERMLPEQYAPRFSRAGGFYSGPFQLKINCPAKGAAIYYTLDGSIPDENAIPYEGPLELTDRTPWPNMLSAISGVCPEGDYIPPEPVLKGNVVRAVAILPDGSKSRVTNATYFIGIDRRQQIGDTPVISMYVDPEDLFGHERGIYVLGRLYEDISTNEDETEDAGYIGNCFMRGREWERSAAIDYMPAGMGEKGFSADLGIRIMGGDSRAYMQKSFRLKCRSEYGEKNIYYNIFPGGQAKYKSIVLRNGGNDYDYARFRDPMLQELVSDRDMETQRSFPVTLFIDGEYWGMYALCEDYDGHYIENNGYGVKAENVVIVKNGQIEEGTAEDQALFDGMVSFITENDMSDDKMYSRAAGMLDMAGFADYSAFNIYINNRDSFFMNDNNWMMWRAREAGKGTDKEDGRWRMMVFDTDYSTGIYEKGMDYDEDTLGDVLEGSSDSTGNAMLKSLMRNEAFRGMFIQALDDMRNRCFEKKRVEETIGAYLAAYEKPVCDTYRRFGPEDRLWGDPSEYYRMRVGELSEWLGGRYEVFDDMMARQFPE

>DIS68_07915_UniProt_A0A352CN20
MVRLFLCEDEIVMRDGIKKHIEWEKEGIEFVGEASDGELAYPMILEQKPDILLTDIKMPFMDGLELAELVKKELPDIRIIILSGYDEFAYAQKAVSLGVTEYLLKPISPSKLKESIRSVAEKIEEERLLNASEAEWAREEEEERREIEIHRLFDTLIMNDMSTSEVLEKAKKLDIPLTARTYQMTRIYLSISGAGSDSFSEIRNSIAGAITEKVAELSAGNGAGCIAFDRGIDGFAMLVLSDDEEETASLTKEMIADIQVIMGAQTEADYFIGVGNIVNRLSEIRYSYDEANKALAHRFLNTGDKVIFSDKYEAGAGAAENKGELNIHSVTDTESPHKVIEKFLKTGMSDEAEPLMDSVFATLGEQNIRSMIFLNYVTMDIYFAMARFLKEIGADAAAIEEECGDINAVLSQSKGADEIRIYLKHYLKAVVEARDKKAARKYSRLLHNAISYIDENYANDDISLNTVASTVNISPNHFSTIFSQEVGQTFIEYLIGKRMERAKELLMTTDMRSSEIAYAVGYKDPHYFSYTFKKTQGMTSREFRARGKAENV

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
© www.kerfeldlab.org, 2022