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BMC type: GRM3B


Organism: Enterobacteriaceae bacterium. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

             DCM53_02825 (fasta) HMM00465alcdh_3_mix GRM3B (HMM details)
                     DCM53_02830 (fasta) HMMptac_1_mix GRM3B (HMM details)
                             DCM53_02835 (fasta) HMM06723EutJMreB_1_grm GRM3B (HMM details)
                                    DCM53_02840 (fasta) HMM02441_09 GRM3B (HMM details)
                                      DCM53_02845 (fasta) P_stone GRM3B (HMM details)
                                           DCM53_02850 (fasta) HMM03928Haemd_2_grm GRM3B (HMM details)
                                            DCM53_02860 (fasta) H_robinEggBlue GRM3B (HMM details)
                                                    DCM53_02865 (fasta) Tsp_turquoiseBlue GRM3B (HMM details)
                                                                    DCM53_02870 (fasta) HMMalddh_1_eutpdugrm GRM3B (HMM details)
                                                                       DCM53_02875 (fasta) Hp_grpu_ickyGreen GRM3B (HMM details)
                                                                             DCM53_02880 (fasta) HMM01965_1_grm3 GRM3B (HMM details)
                                                                                       DCM53_02890 (fasta) HMMgreae_1_grms GRM3B (HMM details)
                                                                                                DCM53_02895 (fasta)
                                                                                                     DCM53_02900 (fasta) H_pumpkin GRM3B (HMM details)
                                                                                                                DCM53_02910 (fasta) HMMreg12833_3_GRM3 GRM3B (HMM details)
                                                                                                                             DCM53_02915 (fasta) HMM10114PocR_2_grm GRM3B (HMM details)
                                                                                                                               DCM53_02920 (fasta)
                                                                                                                                  DCM53_02925 (fasta)
                                                                                                                                             DCM53_02935 (fasta)
                                                                                                                                                        DCM53_02955 (fasta)
                                                                                                                                                                  DCM53_02960 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_pumpkin
       H_robinEggBlue

BMC-Hp(map on tree)

       Hp_grpu_ickyGreen

BMC-P(map on tree)

       P_stone

BMC-Tsp(map on tree)

       Tsp_turquoiseBlue

(complete list of loci)

Protein sequences:

>DCM53_02825_UniProt_A0A3C0GXQ3
MARSFFSCPDVYFGDEAITALSQFNDKRVGIVTDDFMVTSGKTRYLINAMPQASVCIYGEVKPDPSVDILTAGAARFKAFKPDVIIALGGGSSLDAAKGIKVTLEEYFNEGPIALIAIPTTSGSGSEVTSYAIISDPQNGRKYPLISAHLVPDVAILDPNLVLSVPRAVAVDTGMDVLTHAIEAFVSTGASDFSDALAEKAIALTWRYLPQVFNDEKDITARTHMHNASCMAGMAFNAAGLGLVHGMAHAIGGMLHIPHGKINAMLLPLVIDFNSKQASPETRDRYHRCARIMGIEHAVPEQAIALMTQAIRQINRHFGIPATLSELGTDRAKIAGLRTALVNAALADGCTASNPRQATAQDVAALIDHIAG

>DCM53_02830_UniProt_A0A3C2BIA8
MNYTEQQAEWITQQILQELAANKSPAMPEPAAPVALDIPVGISNRHVHLCREDMDILFGYGSTLTRFKAVKQPGQYAAEETVTLRGPKGEINKVRVLGPLRSTTQVEISVADGFVLGAKAPVRMSGDLLDSPGIEIIGPKGRVVKSNGTIVAWRHIHISPQEAELHGLRDGMEIDVRIDGPRGGMLSHVVVRVTADAVLEMHIDVEEANGFGLRNGDTVRGIKRDARHG

>DCM53_02835_UniProt_A0A3C0GXV0
MADTPENRRLHDLAALIDSGECRPCTGALKVGVDLGTANIAIVVVDEDNQPVAGVTYPSSVVKDGVVVDYLTASRVVMRLKQILEEKLGRTLDCAATAIPPGISAGNTKVIVNVVESAGFTVTHVLDEPVAAASALNIKNGAVVDVGGGTTGMSILKGGKVTFSADEPTGGSHMTLVLAGALGLPYAEAEAMKKDPAQEAQVFTLVLPVAQKMASLVSGWLATQRVRNLYLVGGASSFSKFAEVFSKETGRNVIPSVEPLLVTPLGIAMNAGRR

>DCM53_02840_UniProt_A0A3C0GXM7
MDSQTLSQLLDRVIAEVLAQTAAQKSVHVVVTGDDIASLPETLNCLAALEQAGYQLWVSFSHSASESTLQTACMEALRQRGSRAGFGTAPRHYEALYLPALSVNSMSKIALGIRDNLACDAVFQALRHRKQVIATLHPDCHDRTLPLPLLARLEQYAQTLESYGVAISGKRITPTGHAPLTAPAPSASLPITGKKRLITLRDVRLLAPGESLRIEGNTLITPAAKDEITRRNLTLVHG

>DCM53_02845_UniProt_A0A3C0GXN9
MYLAKVTGALVSTTKHVSLNGSKLLMVARLDENYQPTGHAQVAVDTVGAGNGEIVIVTTGSSARMSNSKEHSVIDAAVVGIVDSLELNGK

>DCM53_02850_UniProt_A0A3C0GXM6
MSAPDASLDLWINDAIATQLPERRMSLSMDDGELLAKLAREAAQACDVPIVFSLMDACGQQRFYFSMDNALLISHTLATQKAWTAVALKMATHELATRVQPGGELYGLEKEKDICCFGGGFPCWSGGRLLGGIGISGGSVEEDMLIARQALARFSALRYPLATTR

>DCM53_02860_UniProt_A0A3C0GY11
GKVGELVSVHVIPRPHIEVEKILPKAVG

>DCM53_02865_UniProt_A0A3C2BLR7
MRDNLVEQIISDVMNKQTDAQAKSNTAANFAGCGITEFVGTALGHTIGLVIANVDNQLHEVMNIDKKYRSIGILGARTGAGPHIFAADEAIKATNSEIISIELARDTEGGGGHGCLIIFGASDVSDVRRAVEVALSEIERTMGDVYGSPAGHLEFQYTARASYALNKALGAPVGKSFGMTCASPAAIGLVIADAAAKSAVIDPVGYASPSKGTSFSNEVIFTFSGDSGAVRQAVIAAREVGLQLLATLDPAEIKSTTTPYI

>DCM53_02870_UniProt_A0A3C0GXM4
MSKFTKATPDAAPAAPATSDTARVEGLDEIVAKALAQQSCGQTACASSEVANAGNGAFDTMDEAISAAVLAQVQYRHCSMQDRASFINGIRDVFLQEDVLRAISRMAVDETGMGNYEDKLIKNRVAALKTPGLEDLATRAITGDGGLTLIEYSAFGVIGSITPTTNPTETIINNSISMLAAGNTVVFSPHPRSRKVSLYAVELINNKLAQLGAPANMVVTVTKPSIDNTNTMINDPRINMLVATGGPAIVKTVMSSGKKAIGAGAGNPPAVVDETADIEKAARDIIKGCSFDNNLPCVAEKEVIVVNQVADYLIHCMKKSGAYLLCDKKLIQQLQSLVLNEKGTGPNTAFVGKDARYILQQLGIVAGDDIKVILIETEKTHPFVVHELMMPVLPVVRVDNVDEAIELAVKVEHGNRHTAIMHSTNVEKLTKMARLIQTTIFVKNGPSYSGIGVGGEGHATFTIAGPTGEGLTSAQSFARHRRCVMVEALNIR

>DCM53_02875_UniProt_A0A3C2BLT0
MKKRIINAPTPDILAMLKRRMPGEFRSRLDLIRIDAIGLLMLPVPDLYFYADVASKSANVVVSEIFGSCPQHITTLAIFGEVAAVHEAMRIIGDDDNAF

>DCM53_02880_UniProt_A0A3C2BNK4
MKKILLIAGDFSEDYEVMVPWQALSMLGFRVDVVCPGKRAGEFIKTAIHDFEGDQTYTEKPGHLFRLTASFDEIRLQEYCGIYISGGRSSEYLRLNKSVLNIVHYAINFSLPVAAICHGPQILAAAGVLKGRKLTGYFTVKPEVEMAGGLWVTAADDEAVVDGNLITATTWMGHPAILRHFITQIGTSIIH

>DCM53_02890_UniProt_A0A3C0GY55
MNKVEYETEGVIFNIQRYSLHDGPGIRTIPFFKGCPLSCKWCSNPESQRPQPELIFKKSDCIRCGKCIEVCPQQALSTTNAWFIDRDRCIQCGKCTDVCPTHALEMKGKRMSVTAVMRELEKEENLYRRSGGGITLSGGEPLAQPEFARELLKACKAKGWHTAIETTGFTTKAVIDEVFPYVDLALTDIKAIDPDVHQRNTGVNNSVILENLLRISFLTKVVVRIPVIPGVNDNPQEIHNIAEFARLMQNVDTIHLLPYHSFGENKYNLLGRQYPMGDAKSIAEEKMATLKATVESLGFNCHIGG

>DCM53_02895_UniProt_A0A3C0GXW0
MNSLDILVAFGGGIFGAAIGALAAFEFVGLLVIAMAVVQIITGAPSDFITFPFGLFGPHTGGFAAGVAATAYAAKRGKLGSGRAITAGLSGLAAYDVLLIGGLFGAGGYVIAWGLNQIPAFPSGNAWTDTVALTVVISGVITRLVFGKTGLFGKPEQGIRHCYPPQDKCWMPYHSRIPQLSVLGLGIGLLAGFLGLKFGANGALLAFGISAFSLIFLHFNTQVPVSHHIALPAALVAVLSGSLLWAAIVGIICALLGELMSRIFLIHGDTHIDPPAMAIAIMTTVINLLATIGLFTLVPLF

>DCM53_02900_UniProt_A0A3C0GXN7
MSGQSLGLIETVGMAAAVEAADAAMKSANVNLVGYELTKGGGMVTVKLEGEIGAINAAVAAAISAASRVGSVYAHKVIARTAQHIEHIIHSSETVGVAQPEPAAPAVEPAPQAEDAPSTSIPVVNVDTESSASCMDIIEEAPQAEEQPQPEQPAPEKHEAGQPDAPQESPRKAPRPGGKKR

>DCM53_02910_UniProt_A0A3C0GXP9
MFNIVIVEDEPIELESLRRIISQCVENAVIHEASTGKKAIQLIDQLSNIDMIFVDINIPLPNGNQVIEYLKKKNTDTKVIVTTANDDFDIVRSMYNLKVDDYLLKPVKKTILTDTIKKTLAFDEGDNEKSRALKQKIFAMIDACDYARWHSFVFEVLNGACPGDMMAEDKRKRVTDFLDIVSQYMTAKGEKLAPTQRKLAALIKDINQYGVMESRYFRIMSGLLTISEELFDYAFKSYTGNIDFIERAKFHIEKNILRNLTLDDVAAKAFVSSCYLSRAFKKMTGTGFSNYIATRKITIAKSLLQFSDLKVNTIALELAYQDSNYFCRIFKKETGMAPSDYRKIVTPGDYAAMA

>DCM53_02915_UniProt_A0A3C2BIM3
MMNKYKLHEFLDVKRLQTLQDNFSKSMMIALVVVDENGVPVTRPSGFSDFCARSRLNPNLAHHCYESDNAGGRAAMHAREPVVYRCYCGFVEFAVPIMINDHYLGAFISGQVKVEEEKERSIPYILNNNEVWEENPWLINLHQNTRRMPYERFESTASTLLHVSSYLVEQAHANNIQRELRKKDLELTNELRKRVDIERSLHEAEFKALSYQINPHFLFNVLNTIGRLAYLEDAQRTETMVHDFSDMMRYLLRKNNHGLITLRNEMNYVNSYMSIQKVRMSDRFDYLCDIPEKYLDVVCPFLILQPLVENFFNYVVEPRDTSSHLLIRATDDGHDVIIEVTDNGDGISPQGIEHILSGDQNLQKGSIGINNIKNRLKLLFGERYGLEIMSPNKPRMGTTIKLRFPMLEA

>DCM53_02920_UniProt_A0A3C0GY21
MKSQGLALIIGTVVLINAASSHARAASGPGRLLAGLHAARASLPPWKFWPGGPRRAVILQRRRTRAVQNR

>DCM53_02925_UniProt_A0A3C0GXT6
MFHPKQSSLSALMSRVSGKRIGRLLAFIARHPLLAGAGVLSYLAFADADNSARLYAAVSDKDFPETALAALIFSGLSIAVAYGFIHFIRQVMTAFHHGE

>DCM53_02935_UniProt_A0A3C0GXN3
MFAKSRLALLVGWVTGSLAFPLLAQDTPNTDTVVVTSQLLSGATKLATPDVETPQSVSIVTRGQFEEQGATSVRQAVSYTPGVYSNQIGASSRFDYIVLRGFSDGSLDNIYLDGLKMMGDTNSHSSLVVDPWFLENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEVRVFAGNNDQRGAMLDVTGALDDNDRVAARLSGMTRYADSQFDPLQEERYAVMPSVTWRITDNTRLDVMAYLHRDPEGGSHSGLPYDGTVVPHYGKKVSNTFFEGEDEYDKYDRRENMVGYNIEHLFDNGWSVRQKLRYLHTKVKLNQVYAADWLNETALNRGYSGSDEKMNA

>DCM53_02955_UniProt_A0A3C0GXM9
MTMAVKQAPQGLLLTTSVLLALCLLAIVIAIGVSVGELSIPLENVFYALTNRLGLTQVPLNRIYESVIWDFRLSRALVAACCGAGLAICGAVLQSLLKNALAEPYVLGVSAGASTGAVSVVVLGIGTGAVSLSAGAFAGAFTAFAFVAFLTNGARGGNERTILAGVAASQLFNAITAYTISTSASAQQARDVMFWLLGSFSGVRWPEFQLALCVLAVGLAVCLFYSRALDAFTFGDDAAASLGINVPWVRLILFTATALMTATIVSMAGSIGFVGLVVPHMMRYFFGPLHRTLLIASALAGAVLMVLADIASRMLIAPQSLPVGVVTALVGVPFFAVIIYRSRNK

>DCM53_02960_UniProt_A0A3C0GXS2
MKKVISALGLVFAAVSSAFATTYPVTIENCGYQETFTKAPERVVALGQNTVEILLLLGLQDHVVASAFWPTKVLPSLAAKNEKIKTLTVEIPTLESILSQNPDFVPAQLPLLLGPESKVAKREDLATVGVNSYMSPGMCATKKAVGDMYGSRQKLWDMTFLYKEIADFATIFNVQDRGDALIADFKKRESDLRSEFTKNKKDLSFVFWFSSSSPSADAYVGGKNSASGFIANVLGGHNAITSETEWPTVGWESIIAANPDVIVVSSLDRNRWALDNAEEKIKFLKSDPAVSQLDAVKKGHIVVMDGQAMNPTIRTIYGAEQIAEQLRKMGLN

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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