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BMC type: GRM3A


Organism: Megasphaera elsdenii. Bacteria; Firmicutes; Negativicutes; Veillonellales; Veillonellaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

     C6Y28_09355 (fasta)
          C6Y28_09360 (fasta)
            C6Y28_09365 (fasta)
                   C6Y28_09370 (fasta)
                                   C6Y28_09375 (fasta)
                                        C6Y28_09380 (fasta)
                                               C6Y28_09385 (fasta) HMM10114PocR_1_pdu1 GRM3A (HMM details)
                                                         C6Y28_09390 (fasta) HMMadometsyn_1_grm GRM3A (HMM details)
                                                                               C6Y28_09395 (fasta) HMMgre_1_grms GRM3A (HMM details)
                                                                                       C6Y28_09400 (fasta) HMMgreae_1_grms GRM3A (HMM details)
                                                                                              C6Y28_09405 (fasta) Tsp_aqua GRM3A (HMM details)
                                                                                                C6Y28_09410 (fasta) H_robinEggBlue GRM3A (HMM details)
                                                                                                      C6Y28_09415 (fasta) HMM02441_05 GRM3A (HMM details)
                                                                                                          C6Y28_09420 (fasta) H_driedBlood GRM3A (HMM details)
                                                                                                            C6Y28_09425 (fasta) P_fadedGreen GRM3A (HMM details)
                                                                                                              C6Y28_09430 (fasta) H_robinEggBlue GRM3A (HMM details)
                                                                                                                   C6Y28_09435 (fasta) HMMptac_3_eut2 GRM3A (HMM details)
                                                                                                                         C6Y28_09440 (fasta) HMM06723EutJMreB_1_grm GRM3A (HMM details)
                                                                                                                                     C6Y28_09445 (fasta) HMMalddh_1_eutpdugrm GRM3A (HMM details)
                                                                                                                                              C6Y28_09450 (fasta) HMM00465alcdh_3_mix GRM3A (HMM details)
                                                                                                                                                  C6Y28_09455 (fasta)
                                                                                                                                                    C6Y28_09460 (fasta)
                                                                                                                                                            C6Y28_09465 (fasta)
                                                                                                                                                               C6Y28_09470 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_driedBlood
      2x H_robinEggBlue

BMC-P(map on tree)

       P_fadedGreen

BMC-Tsp(map on tree)

       Tsp_aqua

(complete list of loci)

Protein sequences:

>C6Y28_09355_UniProt_A0A2S0M8M6
MAKNIIILNGSPRPKGNTSALTAEFKKGAEEAGNKVTEFQLSRMKINGCIGCWGGGKDSEHPCSQRDDMEKIYPLYKEADVVVLASPLYYWFISGFLKNAFDRLFAIAESDPNYRNPKKESVLIMAAEGAGFEESEYWYDHLEKHIGWRSLGKILCGYVTQPGDTDGKKELQEAYALGNSIQ

>C6Y28_09360_UniProt_A0A2S0M8Q5
MKKNLGVVQAVYPMPVLMVAAYDENGKVNVMNAAWGMICNKDRIALFIDEEHKTTQNLLKTKAFTVALADKEHMDVADFFGIATGNKMNDKFERTGYTAVKSEFVNAPIIDEFPVVMECELAEVSETESFYCIVGKIINTAAEERVLSENGKVDPSKLQALIFDQFQHGYYVSGEQVGKAWNAGASLMKK

>C6Y28_09365_UniProt_A0A2S0M8L7
MDKIEIFKALSNETRLNIIEWLKEPEKNFPPQGGHFDDVVDLKGGVCVGSIRDKAGIAQSTVSHYLDMLQKAGLLLSERHGKWTYYRRNEETLAALADYFGHEI

>C6Y28_09370_UniProt_A0A2S0M8U0
MHFSCGIVRPPYEAGSCFLQVTSGCSHNKCRFCTFYKEAPFSVSPESEIREDLQEIRDSGWKVKRIFLQGADPFLLSYDRLKRIMDLIKEYLPWGVSVGGYGRVDSVKNKSVEQLKSLKEMGYDMIVFGIESGDDAVLDKMNKGYHASDIVEQLSKLDEAGMHYSVIFLYGLGGHEYGMGHAIKTAEVLNHLSPVRVLASGLSIFPDTPLMEEVRKGEFVEATETEKIQELYTFVKTLDIHTLLDATNVSNMMPVYGYLPEEKEKILAMLKQGADEQGEEQLRMRRDSMRSL

>C6Y28_09375_UniProt_A0A2S0M8L1
MKLTKIFEPITINKTEFKNRMVVSAMVTNYCNEDGTPTEKFMAYHEHKAKGGYGIIITEDFAVTRTAGASKTLAGLWEDRQVEPWRVFTDRIHKAGAKTIAQIYHAGRETSSRITGVQPIAPSAIKDPTMPETPREMSVNEIHDLEKAFVDAALRAKAAGFDGVEVHGAHGYLINQFVSPFSNKRCDEYGGTTENRTRFPREIIQAIRLAAGEDFPIFYRMSSEEYVPGGLEIEEAKLIARLIEDAGADCIHCSQGVFATGHIIIPPAPVPVGGFVHHAAALKTVVDIPVIAVGRINDPLLAESILASGSADLCTMGRASLADPEMPEKARRGDFASILHCIGCVQGCAGEHEQGHPIRCLVNPLTGMEDVYDISPAAEPKKVVVVGGGVSGCEAAIAAAGRGHHVTLLEKSGELGGQWIAASIPMAKGDFSSFIVWQKHMLEKLGVEVRFHVDVTKETLEEMKPDAVILATGSNPAMPPIKGLREYGVVAQKVLRGEAEVGNKVVVIGGGLVGAETADYLAEHGCGDVTIVEMLPQIVKDGEPAPTYYLKKRMAEHGVKVLTSAAVQEVKEHGVVYKKDESCAEITDVETVVIAIGVRANTVLEESLTDCDFTIVSVGDCHERAKNGYRGIQEGYEAGILI

>C6Y28_09380_UniProt_A0A2S0M8L0
MITKDMTLADVVKAHPNTIGFLNGLHLDYCCGGHDPIAMAVREKGLDVDKFLAELNQAAAKKATQRDVHDDIEAFKTLKVTEMLDDLEATHHVTDRRLMAETEELLNKILIVHYPHHGKMLTRLHHLYAGLKAELEEHFAKEEQLVFPLMRQHPHPDSQTLSLIQNLETEHTGAGDVIKEIQELTDNFTPPADACPTFRHTYVVMEQLFDDIFIHIFKENSIAFPEYAEQV

>C6Y28_09385_UniProt_A0A1M6TK93
MTITLSKEDRVKKMVRSIMQDYTNATSIACIFVDIQGKERSSKYNFTKFCHFMRSVPEFRSKCYQCDLCGGLETFKNRACCPYRCHAGLVDFSIPVVYENQLHGFIVSGQMVSDDMRIPNLQEQTPWQTDSQAFKYFRSAPQYRYEEIMSASRVLNTLTACYFPYAQDGGSLSYETPVIGGEAHPDDGELSRITRPEIRKTITFIKEHLSCNLSLRTIAEEVFLSESYLSKLFKQEMNMNLMQYINQCRVREAEKILASSHESVDAIGRRLGYHRTSYFCKIFKQYTGETPHAYRKKYNL

>C6Y28_09390_UniProt_A0A2S0M8Q0
MGNCHYTYLTSEAVTEGHPDKICDQISDAIVDAYLTQDPASHVAVEAFVSGNVLTLAGEVSSSATVDVTALARKVIADIGYTDPALGFTADACLVFTNIHQQSNDIKQGVTQAEGDRIVGSGDQGIMYGYATNETANYMPLTVNLAQGLVRRLDRVRHDTALGRFLRPDGKSQVTMRFDDEGHPVGIHSLILSAQHSEAIGQDDLRQLLQKTVIEPVCSSWIRPDTAIRINETGRFVIGGPVGDTGLTGRKIMVDTYGTLAKHGGGAFSGKDATKVDRSAAYMARYVAKNVVAAGFCDRCEVSIAYAISGIYPEAVQIQTFCSEHIDRKLIDQAVAKTFSFAVGDIIRDLDLRRPQFRKTAVYGHFGREDQGFAWERTDKAQALRQAIR

>C6Y28_09395_UniProt_A0A2S0M8M5
MDVLGKGFTKPTARIQALRDAIYDATPTVEADRAELVTASYKETEGLPVILRRAKAVEKILTEIPIAIRDHELIAGSLTVSIHGCQIYPEYSFDWVEKEFDTMATRMADPFEIPKDTAKRLHDAFLYWPGKTTSDLATSYMSQSCLDAQANGVFTVGNYYFNGVGHVCVDYGKVLREGFGGIIREAEAQKAKLSGASPEDMKKRDFYDAVIIAYKAAITYAHRYADLCEQLASREGDQTRQAELLKMAANCRRVPEQPATTWWEALQSFWFVQLILQIESSGHSISPGRFDQYMYPYLEGDKNISRDFAQELLDNIWIKFNDLNKTRDAVSDQAFAGYAIFQNIQCGGQDEDGVDATNPLSYMMIDAAAHVAMAAPSFSIRYSNRTPDEFLYRACELVRLGLGYPAMYNDEVIIPAMMNRGIPLKDARSYCIIGCVEPQVPHKTEGWHDAAFFNIAKVLDITLHNGRNGQVQLGPKTGEMKDFQNLGDLMQAYKTQMEYFVKLLVEADNAVDYAHAERAPLPFESALVDDCLGRGKSMQEGGAIYNFTGPQAFGVADNGDSFMAIQKHVFEKGEVTMEELQEAMDHNFGYPDETGKLATWFGTGCCAAAGSTPLEGMDERQIYEAVKRILSAKGSIDINELQKDLQQGSAPAPAAASRSDVGRYQQIKRIMENTTWFGNDDDVVDIITREAGQIYAREVQKYKNPRGGQFQAGCYPVSANVLFGKDVAPLPDGRLAWTPLADGVSPRPGCDTNGPTAAAMSVAKLEHETFSNGTLYNQKFNPAALAGDEGLKRFAALCRAYFENKGMHVQFNVIDKATLVEAQKHPEQHKDLVVRVAGYSAQFISLAKEVQDNIIDRTEFEF

>C6Y28_09400_UniProt_A0A2S0MAD6
MSKITIDYQAEGDIFDIQRFSLNDGPGIRTIVFLKGCPLSCWWCSNPESQRRRPVVMYNAADCVRCRRCESACQRHAVTFMDDGRRHFDYQACTGNGDCAAVCPTGALVMKGRSIRVGELIEILKKDRSTFRHSGGGVTLSGGDPLMQPDFAGELLKACKAQGWNTAIETEGCAETETYLRLVPYIDTILMDIKHMDPEKHRLFTGVSNELILNNVRRVSAFAPLTIRVPVIPKFNESEEEIRAIAEFAASLGKVRYVHLLPYHSLGENKYRMMGIEYKMNRLSAKSLSNKELEKYRPIVEQAGVSCRIGDES

>C6Y28_09405_UniProt_A0A2S0M8L8
MDQELLEKVMNQVKAELGAGATPAATVAPAASAPAAAPSMKGDATGISKALGRTEFVGTSIGDTIGLVIASVDPMLKDAMKLGKFRSIGIIGGRTGAGPQIMAVDDAVKATNTEIISVELPRDTKGGAGHGSLILIGAEDVSDARRAVETALQVLPKYFGDVYGNDAGHLEFQYSARASYCLEKALGAKFGKAFGMTCAGPAAIGVVLADTAVKAANVEVVGYSSPGNGGTSFSNEVILCFSGDSGAVRQAVKAAIEVGKKLLGALGDEPKSTTTPYI

>C6Y28_09410_UniProt_A0A1M6TL52
MTNEALGMVETKGLVGSIEAADAMVKAANVTLIGYEKIGSGLVTVMVRGDVGAVKAAVDAGAASAKVVGEVVSVHVIPRPHTDVEKILPHLD

>C6Y28_09415_UniProt_A0A2S0M8R4
MAYDTEKKLEDLILRAVRQVLAEQSPAKRRLYVVFADAFDCRCVNFLRSLSPADDVTVLVDEIQAEQVRCDIEQACPFASVVLTSQARSLPLTDSLTVYPVASRDFVVKAALGLADTFAARWLARCFAAGSAVHLQLSGLARFTGREPAAYVGQILGYYRKLLEYGITIGPQLPDRKTGEQPVPQAAPVKGTTPVVACQDKVLTAADLYPYDKGTVLLVGEHTVVTSFAREAALSRGIEIRRT

>C6Y28_09420_UniProt_A0A2S0M8M7
MRKGRGRPVEKSLGLVEVRGLSCAIEVADAMVKAANVVLDELEAARGNGMMTVKVRGDVGAVRAAVEAGKVTASSYGALVSAHVIARPHEMTGTCFVHHESQRQGPDHNAVCPEGKETEETEKPEPAASQPVPPPKKARRTRRLRMAGKAKQSVTPAAEGPAPDTTGSETPSGHSSEET

>C6Y28_09425_UniProt_A0A1M6TKK8
MKIAKVTGSIVSTKKEDGLVGSKLMIVRFESSDGVPYGNEEVAVDYVGAGIGELVLVASGSATRTTETMRLKPIDLAIVGIIDNLN

>C6Y28_09430_UniProt_A0A269TD96
MANEALGMVETRGLVGSIEAADAMVKAANVSLIGYEKIGSGLVTVMVRGDVGAVKAAVDAGAASAKIVGEVVSVHVIPRPHTDVEKILPQLAPAAAPSAE

>C6Y28_09435_UniProt_A0A1M6TKY3
MSQEMAAMLTERIVESVRHYENFKIPIGVSNRHVHVSRADLDILYGKDYALTHKGELGQPGQFAANETVTLKGPKGTFEHVRILGPVRSQSQVEISKTDSFRLGVKAPITLSGHLQGTPGITLVGPRGTVELPCGVIIAKRHIHMTPAQAAARHLQDGQIVHVETFGERQGILGDVVVRVSDTAGLEMHIDVDEANACSLSNRDYVMICPV

>C6Y28_09440_UniProt_A0A2S0M8R8
MLVENQKLAEFAALVSSGDVRPFEGPLKVGVDLGTANIVMAVTDQDNRPVAGMTTHSTVVRDGIVIDYVGAVRAVRTMKAALEEKLGVALTKAATAIPPGILDGNVRCIANCVEGADLEVIKVMDEPTAAAAVLGIRDGAVVDVGGGTTGISILRDGKVVYTADEATGGTHMTLVLSGYYDIGRDEAEKMKLDASQEQAVFPIVYPVVEKMASIVKRFVDGRQVKDLYVVGGACCFSEFENVFEKILHIPTHKPNDCLFVTPLGIAVNQ

>C6Y28_09445_UniProt_A0A269TDQ8
MSTTIDPVVLQQLVAQAVRQLQKEGTQAAAPAVPAARDEYGVFTTMADAIDASAAAQHTLLFQSPSQRQQWIDVIRQTCLDKNNMQMMSRMAVEETEIGRYEDKVIKNTAAARYTPGIEDLKTDARTGEHGLVLFEYCPFGVIGAITPTTNPTETIINNSICMIAGGNTVVFSPHPRAKKTSIFLVQLLNKALYEAGAPLNLITMVREPSIEATDEMISNPKVRLVVATGGPGIVKKVLSSGKKAIGAGPGNPPVVVDETANIEKAAKDIVDGSSFDNNVPCIAEKEVFAVDSIFDYLRINMKGAGAYEITDTDTIERLWKLVANEKGTGPKVEFVGKSAKYILHQLGIEVEDTKKLIIMEVAKDHPFVQTEMLMPILPLVRCDNVDQAIEWAYEAEHGNRHSAMMHSTNVAKLSKMAKLMETTIFVKNGPSYAGLGIGGQGYPTFTIAGPTGEGLTSPKSFCRLRECVLKDMFNIR

>C6Y28_09450_UniProt_A0A2S0M8N3
MDICQIATKVISGEQALAAFRVYRTERIFILCDSFLTQSGAIDLLSRQIAPTNQVQVFDDVVPDPNLSGVARAMAAAVDFQPTVLVAFGGGAAIDTAKGLVYFASGAHAFSRPPVFVVIPTTSGTGSEMTSFAVITDAEEKRKIALIDDVMYADVAILDPQLTVSVPPAITANTGFDVLTHALEAYVAKGATDFTDAMACKAVELALEYLPRCYHYGANLKAREAMSNASNMAGVAFNLGGLGMVHSMAHQLGGMYHVPHGLACALALPAGIAYNSRDEKAAAKYADLTYKLSLAPRSLPVPQAVCLLQGVLKALMSDMAMPQRIGELPKGPDRKSYVQTIPAMAAHAMEDRCLPGNPRPVDERTFEDLFASLY

>C6Y28_09455_UniProt_A0A2S0M8M4
MSVEFEGKKACIAPEGVFIIGTYDEKGVPNAMNAAWGAQSDYGEITLFLAKHKTTDNIKHTKAFTVAFATKDTVDIADYFGVETGNKVNKIEKAGCHVHKSHHVNAPIIEEFPVTLECECTSYDDNTGILVGKIVAQQADESVLTDGKIDYDKLQPIIFDIATMTYRLIGPVVGQAFHDGLKLKG

>C6Y28_09460_UniProt_A0A2S0M8P7
MKRVQKNIVESDIVTDFPYNWAAPEEETPEHCLLKQEKKEQVWKALNKLNETQRTLIVAHYIHNQTYDYISKKYGIEKSKVRRIIKRGLNVLRCLLE

>C6Y28_09465_UniProt_A0A2S0MAA6
MKMENQTESVVWGIHSQDDSLFLDKSIIGIGWTKMGDLSKIGSTRENFKEKVQEVYPDIKKGAIPNWAGIMYRFVVEMKKGDYIVFPSKADRKINLGIIESDYMYDELAPLYPNIRKVKWLKHYPRRTFSQGALYEVGSLMTLFTIKNYANEYLGSLDKKFSPKIVENTEDETVGVTAEDIMNNTRDYILKEISRQFKGYDLENFVASLLNAMGYRTTVSPHGGDSGIDIIAYKDELPPRIAVQVKSQDGDIKETTIQSLKGAMMPGDYGLFVSLSDYTKSAKKFLKANPIIRGINGIELVNLVLKYYEGLDETYQRAISLKKVYIPVAKGEDKV

>C6Y28_09470_UniProt_A0A2S0MA99
MTDKAGKPYMCHLTSVSNAVLPLGEDYAVVGMLHDTLEDTEMTKETLSSLFGKEVADAVSLLTHDDKVPYLDYVRGVKKSGNPLAIAVKKADLRNNMDLTRLPNVTDKDLKRVEKYKKAYAILTGDEV

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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