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BMC type: GRM2


Organism: Vibrio furnissii (strain DSM 14383 / NCTC 11218). Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

     vfu_A00315 (fasta)
           vfu_A00316 (fasta)
            vfu_A00317 (fasta)
              vfu_A00318 (fasta)
                         vfu_A00319 (fasta)
                                   vfu_A00320 (fasta)
                                     vfu_A00321 (fasta)
                                        vfu_A00322 (fasta)
                                             vfu_A00323 (fasta) HMM02441_04 GRM2 (HMM details)
                                                 vfu_A00324 (fasta) HMMptac_3_eut2 GRM2 (HMM details)
                                                     vfu_A00325 (fasta) H_grassGreen GRM2 (HMM details)
                                                            vfu_A00326 (fasta) HMMgreae_1_grms GRM2 (HMM details)
                                                                                     vfu_A00327 (fasta) HMMgre_1_grms GRM2 (HMM details)
                                                                                             vfu_A00328 (fasta) HMM00465alcdh_3_mix GRM2 (HMM details)
                                                                                              vfu_A00329 (fasta) P_clearBlue GRM2 (HMM details)
                                                                                                          vfu_A00330 (fasta) HMMalddh_2_egra GRM2 (HMM details)
                                                                                                            vfu_A00331 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                                                                              vfu_A00332 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                                                                                vfu_A00333 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                                                                                   vfu_A00335 (fasta)
                                                                                                                        vfu_A00336 (fasta) HMMreg00486_2_GRM2 GRM2 (HMM details)
                                                                                                                           vfu_A00338 (fasta)
                                                                                                                                        vfu_A00339 (fasta)
                                                                                                                                            vfu_A00340 (fasta)
                                                                                                                                                 vfu_A00341 (fasta)
                                                                                                                                                       vfu_A00342 (fasta)
                                                                                                                                                         vfu_A00343 (fasta)
                                                                                                                                                              vfu_A00344 (fasta)
                                                                                                                                                               vfu_A00345 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      3x H_brightSkyBlue
       H_grassGreen

BMC-P(map on tree)

       P_clearBlue

(complete list of loci)

Protein sequences:

>vfu_A00315_UniProt_F0LQ69
MGFDFQYMLGLMPILLKYLSTTMEMAVWGMFFALILSVLLANIRVFKVPVLNALSQLYISFFRGTPLLVQMFLLYYGLPQIFPLLIGIDAFSAAVIGLTLHFAAYMAETIRAAIIGIDRSQMEASLSVGMTTGQAMRRIILPQASRVALPSLMNYFIDMIKSTSLAFTFGVAEIMAKAQMEASSSFRFFEAFLAVALIYWAVVMVLTRVQIWAENKLNKAYVR

>vfu_A00316_UniProt_F0LQ70
MITLSNIHKRFGDAEVLKGIDIIINQGEIIVIIGSSGTGKSTLLRCVNFLEQADQGTITIDDVSVDTQKHTKAEVLALRRKTGFVFQNYALFAHLTARQNIAEGLITVRGWKKDQALQRAQQILEDIGLGDRGDSYPAALSGGQQQRVGIGRAMALQPELLLFDEPTSALDPEWVGEVLGLMKKLATQHQTMLVVTHEMQFAKEVADRVIFMAEGNIVEQGSPQDIFDHPQDPRLRKFLNQVGID

>vfu_A00317_UniProt_F0LQF0
MSKRTFQPTVLKRKRTHGFRARMATANGRKVINARRAKGRKRLSK

>vfu_A00318_UniProt_F0LQF1
MLTPEHYQNVFQQAHRAGSPHFTIIARDNNLSHPRLGLAVPKKQIKTAVGRNRFKRLARESFRLNQHKLAHKDYVVIAKKSAQDLSNEEMFTLFDKLWHRLSRPSRG

>vfu_A00319_UniProt_F0LQF2
MDSQRNILLIALALVSFLLFQQWQVAKNPAPQAVEQAQTSSAVPAPSLADEFDPAPSQNSAAAKVITVTTDVLTLSIDTVGGDVVTAKLNQYSDELDSENPFVLLKNTQGHQFIAQSGLIGPQGIDLSSNNRPTYTVDADSFTLADGQDELRIPMTYQANGLEYTKTFVLKRGNYAVDVEFNVVNHSGNNATLGMYAHLRQNLLDSGGSLAMPTYRGGAYSTEDTRYKKYSFDDMQDRNLAMNLANGQGWAAMIQHYFASAWIPRNEPGTNLYSRVIGNLGDIGVRMPNKTIADGQQADFKATLWVGPKLQDQMAATAPNLDLVVDYGWLWFIAKPLHWLLSVIQSFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKTEKVNPLGGCLPIFLQMPIFISLYWALMESVELRHSPFFGWIHDLSAQDPYYILPLLMGASMFFIQKMSPTTVTDPMQQKIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLIQQTLIYKGLEKKGLHSK

>vfu_A00320_UniProt_F0LQF3
MTTDTIVAQATAPGRGGVGIIRVSGPKATEVALAVTGRTLKPRYAEYLPFKTESGVELDQGIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIKRILMIPGVRPARPGEFSERAFLNDKMDLTQAEAIADLIDASSEEAAKSALKSLQGQFSKRIHTLVESLIHLRIYVEAAIDFPEEEIDFLADGKVSGDLQAIIDNLNAVRQEANQGAIMREGMKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVEKIGIERAWDEIAQADRVLFMVDGTTTSATDPKDIWPDFVDRLPDSMGMTVIRNKVDQTGETLGICHVNQPTLIRLSAKTGEGVDALRSHLKACMGFTGNQEGGFMARRRHLDALERAAEHLSIGQQQLEGYMAGEILAEELRLAQQHLNEITGEFSSDDLLGRIFSSFCIGK

>vfu_A00321_UniProt_F0LQF4
MLNAGVLWLALSICSEITGTSFIKKTNNFRKLGPSVLVIAAYSTCYFALTKTMGYIPVGIAYSLWCGFGIIGVTLFSMVLYKQKPDIPAVIAMGLIITGGIIMNMFSQM

>vfu_A00322_UniProt_F0LQF5
MPQSIKKWLWMALVIASETSATSTLKMFDTSEGFTKTALLAVIVLLYIVCYYSLSQAVKYLPVGLAYATWSGTGILLVSTLGMVFYGQHPDMAAMIGMTVIASGIIIMNLFSKMGEEESDDSDTASTLHHNGETQC

>vfu_A00323_UniProt_F0LQF6
MDAQHLDEHTMQALVVQVMTRLTKPTLLVLNRAHGYQQEIAAHLSRWSGIGWHILVLPHSDHELAAMQHLGTQVTWDGHQPATWLASYQQVLFPFLDMATLAEVSQGLHFTPAAQLLQYALMMGLPTYALDYQCNLTRELNQVLGLARNPAMCQRATSQLATLANLGAVIGSCADIQVAMTGDGKVASARTRRAGSARQHPSAYITLNEVMSQGGDAFSLQDNLTDLAAEYLKQQQT

>vfu_A00324_UniProt_F0LQF7
MINSLLMAQIQQRLPVLQNDVMDAAMVIPTGVSNRHVHLSQADIEALFGPGYQLTPLKALRQPGQFAAKECVMVVGPKGSINKVRVLGPVRAETQLEVSKADCYALGIHAPVRESGDLSQSADALLVGCAGYVKLQSKVICAQRHIHMTPQDAQALGVVHGQKVRVRAGQQCGLVFEQVVVRVDPRYALEFHIDTDEANAAGIGNGEAVHLVA

>vfu_A00325_UniProt_F0LQF8
MTISLGVIETIGLTRAIQAADAACKAAGVTFTGYRKAGAGLVSIYLEGEISAVSAAVASGLAVIHASAPESRSLVMARPDRSVLAMLAKAPSGPVRSEDPAAIDPQPCVANLHTDQHEDRLAGSASEPVGVDSPAELSSAVSAPPQTDTTLTAAASPEGEAPHEPLATPTENAAAPKPATSRRKRTHTKSQGTQK

>vfu_A00326_UniProt_F0LQF9
MTGRAQGNQDAEMKGRIFNIQKYSIYDGDGIRTLIFFKGCNLRCDWCANPEGLSSQFQVMVSHDKCVQCGKCADVCPAGVHHMRTEATGNRVHYVDRRVDCTGCRQCEAVCMGDALDVMGKDVTVAELMDIIMQDYDFYMSSGGGVTLGGGELSLQTDFAVALLTACKAQMINTAIETQGTTRIENYEKLAKCVDLFLFDLKQIDTDQHRALFGIGNEGVKRNLERLVELGANIVIRMPLIRGYNDSYDSITGAFEYVMALAKRGNGCIQRIDVLPYHQFGKTKYDKLDMIYPIQHDLSYSDEELTQLSEFFTQFDFDIRLVRH

>vfu_A00327_UniProt_F0LQG0
MAHYSLTPRVKMLAETLLAKTPSINADRATILASIGDDIAGMPPLVKKAQHFSQLMAELPLYIGQDELIVGSQSSALRGAIFHTEAELTSPSVFGFLNDEHTNTPDYMTVISSGLDVLAQHMEARLKAIGSAISRNGMDTVNQGKAMLLACKGVNTFTQRLATALDAKANLEAHPYRKAELQDSAAMLRHLLGQPARTFKEACQAFYLIQLMMHLDNGGYAVGHMGLDKALYGYYQRDIQAGVMTPEQAYELVECLWLKLVELSEVRADVANGGYPMFDWMVQGGVMNDPQLLQNDLSAMLLAARNNIASFDHSLQLRLFQGGAASDATMTPCGAPTVESTSDTPVMEGLTPRLQRLRNNYLKARPSVSIYRAQAFTEVTKQNQGLPLILLRAKAFRYACETAPLLIQDDELIVGHPCGKPRAGAFSPDIAWRWVRDELDTMSTRPQDPFEISEEDKRIIRDEIVPFWEGRSLDEICEAQYREAGLWDFSGETFVSDLSYHQINGGGDTCPGYDVLLFTKGMNGIEADAEAKLAELSMENPDDIDKIYFYKASIETCKGVVAYAHRLAAHALELAEQETDPHRRAELLTIAKTNENVPANPPTTLQEALQSIWTIESLFEVEENQTGLSLGRLDQYCYPMFRADIDSGRLTQEQALELMQAFIIKCAELMWMSSELGAKYFAGYQPFINLTVGGQKRQGGDATNDLTLLIMDAVRYVKVYQPSLACRIHNQSPQHYLEKIVDVVKAGMGFPACHFDDSHIKMMLRKGYDFDDARDYCLMGCVEPQKSGRIYQWTSTGYTQWPIAIEFVLNRGRMVLFDSYQGLDTGDLNHIHTFEQFDNAVKAQVAHIIKLSAIGTVISQRVHRDVAPKPLMSLMVEGCMEQGKDVSAGGAVLNHGPGLIFSGLATYVDSMAAIRKLVFEDQKYTLAQMRDAMLANFEGYEELRRDCLNAPKFGNDNNDADAFALDITEWTERECRRYRMLYSTMSHGTLSISNNTPIGELTNATPNGRLAWQPLSDGISPTQGADKHGPTAIIKSISKMNVETMNIGMVHNFKFLKGLLDTPEGKNGLITLLRTASILGNGQMQFSYVDNEVLKQAQLEPEKYRDLIVRVAGYSAYFVELCKEVQDEIISRTVLDKF

>vfu_A00328_UniProt_F0LQG1
MNQFQIKPAIQFGADALNSLRDLPGKRALVITDQAMVKFGITERVIQPLLANHMVVDVFAEVTPDPDTAVIARGMNAFMASQPEVVIAVGGGSVIDAAKGVIYTLAQGGKLTHKPYFVALPTTSGTGSEVTAFSVIKSNTEKWVVVDEYMLPDLAILDPNLVASVPGPITADTGMDVLCHALEAYVSNQASDFSDALAEKAVQLVFAHLLDCYQHGHDMQAREKMHNASCIAGMAFTNASLGITHSLAHALGGKFGVPHGRANALLMSHVVAFNADFQHHCDTLAAHKYARLAALLGLPARHAREGVQSLLVAIDVLREQLGLPTSIHACGIEHGDFHVALAAMVTLAKQDNCTPTSPRLASETELDALYRDSFLSASITAH

>vfu_A00329_UniProt_F0LQG2
MILATVTGHVVATQKSDELRGSNLLLVTALGDDLEPVKDRSYVAVDSVGAGVGDHVLVEEYFALHKQAYRAMSIVAIVEKIHQGR

>vfu_A00330_UniProt_F0LQG3
MMLDKDLQSIQAARELIQKAKHAQRQFAKLSQQHVDKIVAHIAAEAARHAEPLAKAAHEETGFGRWQDKVLKNIFASTRVHEHIRDMKTVGIIADDATNQVMEVGVPLGVITALVPSTNPTSTIFYKTLIALKAGNAIIFSPHPNAKACSQQAIDVVKRAALEAGAPEGIVDGVTLLTMQATETLMKSKDVSLILATGGEGMVRAAYASGTPTISGGPGNGPAFIERSANIAQAVSDIITSKTFDNGVICASEQSIIVERCIYESVHQELIRQGAYLLNETESAQLAALLLRPNGMINPAMVGQSAVMVAQKAGFTVPAHTTVLVSPQTTVSPQNPYSREKLCPVLGLYVEEDWHTACARVMELLTNEGMGHTLVIHTQNDDIVREFALEKPVFRMLVNTPAALGGIGATSNLTPALTLGCGALGGGSSSDNVGPMNLLNIRKVGYGVRSIEALRQPSPVTDIEPPHVVPTVAHPPQSIFDDSRFCPGVSAANVTPPTALADDDRFTAPAASSHHAAKPNACHDISEAQVEQIIQHVMGRMAS

>vfu_A00331_UniProt_F0LQG4
MKDALGLIETKGLVPSIEAADAMCKAANIELIGYENVGSGLVTVMVKGDVGAVNAAVESGIEAARKVGVVVSHRVIARPHNDIEKISSQHKA

>vfu_A00332_UniProt_F0LQG5
MKDALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVRGDVGAVKAAVDSGVESAQRVGEVVTSIVIARPHADIEKIVSQYVVTE

>vfu_A00333_UniProt_F0LQG6
MGDALGLIETKGLVACVEAADAMCKAANVDLIGYENVGSGLVTAMVKGDVGAVKAAVDSGVESAQRVGEVVTSLVIARPHNDIEKIVIKHKA

>vfu_A00335_UniProt_F0LQG7
MYSNKSGKIFFFYALILFLLCTLPFLSKIMPENSGEMKCTARAIMFFEDTETETVNVNVHFHFAREGTGSLVVEGYSDSKAGWLYMQRYVKFDYYSQRVSDRERMYKVNSWSASKSSIDETPDVLFDYFMREMSDSNHALKLQVQQLSHDTVLLSSINSPLFVCALTD

>vfu_A00336_UniProt_F0LQG8
MKYKINGFLYYDATDATLSIDDQGTSDTHLSITANALLYFLLQHPGVLTRDEVMKSVWDDNGLTSSNNNLNQYLSLLRKSFRHYQIDDVIVTIPRGRLEINQDMLIEVIDDNVLHPIFASEEVKPQTNPRPHNSNDLPAQTETQERNWMMASAVLFTAALVLLWTAIISERSIHIVQLNQVTAEGCDLFSNETMINTEMANSYKQSFDAVRKKLGLECNDDRRFIFYYGDKFKNKGLGRTYIAQCAKNENNPYAYCDNYFYYSWK

>vfu_A00338_UniProt_F0LQG9
MIHIITGSTLGGAEYVGDHLSDLLQAQGKETTIHNQPQLAEIPAQGTWLIITSTHGAGDYPDNIQPFIQALQATPPNTRDLTFAVVAIGDSSYDTFCAAGKHAFDLLEDIGATPLADCFTIDVQEYPVPEDAAEVWLNERLAAF

>vfu_A00339_UniProt_F0LQH0
MLYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAMGGLMAEAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRHTLENTPNLTLFQQAADDLIVENDQVRGVVTQMGLKFRAKAVVLTVGTFLGGKIHIGLENFSGGRAGDPPSIALAQRLRELPFRVDRLKTGTPPRIDANSVDFSILEAQHGDNPTPVFSFMGKREHHPRQIPCFITHTNEKTHDVIRANLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTFETKFIQGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQDKEGWSPRRDQAYVGVLIDDLSTMGTKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLINDARWARFNQKIEHMETERQRLKETWMNPNSDGVDALNALLKTPMSREASGEDLLRRPEMTYDLLTSLSAFAPALEDREAAEQVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPIDLDYKAVKGLSNEVVMKLNNAKPESIGIASRISGITPAAISILLVHLKKHGLLKKGEAA

>vfu_A00340_UniProt_F0LQH1
MNSLRVKLDALIAQTDLDVSERQCEQLVGYVELLNKWNKAYNLTSVRDTSDMLVKHIMDSIVVSPLLVGERFIDVGTGPGLPGIPLAIMNPTKSFVLLDSLGKRIRFIKQVLHELNITNVTPVQSRVEEFDGGEDGFDGVLSRAFASITDMVEWCHHLPRAKTGVFLALKGQLPQDEIEQLPEWCSVIDIKALKVPELEGERHLVILSRKG

>vfu_A00341_UniProt_F0LQH2
MGKIVAIANQKGGVGKTTTCINLAASMAATKRKVLVIDLDPQGNATMASGVDKYQVDATAYELLVEEAPFEEVVCRKTTGHYDLIAANGDVTAAEIKLMEVFAREVRLKNALASVRDNYDFIFIDCPPSLNLLTINAMAAADSVLVPMQCEYFALEGLTALMDTISKLAAVVNDNLKIEGLLRTMYDPRNRLANEVSDQLKKHFGNKVYRTVIPRNVRLAEAPSHGKPAMYYDKYSAGAKAYLALAGEMLRREEVPA

>vfu_A00342_UniProt_F0LQH3
MTKRGLGKGLDALLSTSSLAREKQHVASQSQAMSSEGELTDLVITNLKPGMYQPRKDMSPEALEELAASIQSQGIIQPIVVRPLALGGYEIIAGERRWRAARQAGLKQVPCLVKRVDDRAAIAMALIENIQREDLNVIEEAQALERLQDEFKLTHQQVADVIGKSRATVSNLLRLNQLDDSVKRLVETRQLEMGHARALLMLDGEQQIEVAARVAKKQLTVRQTEQLVKKCLSEHSDVKNVPEDVEIQQMSQNLSEKLGAKVSIVRSKSGKSKVTISLDEPHKFEQLIAKLQG

>vfu_A00343_UniProt_F0LQH4
MVVAAGMAIVVNAEWGISALIGGGIFVFANAVFALCAFMFSGARAAKRITASFYTGETLKILITIALFSVAYMYMQVELVPLKLTYLLALGINICAPVLFINNKK

>vfu_A00344_UniProt_F0LQH5
MAAPGEALTSSGYIEHHLSNLSLYKLGLVAEETSFWNVHIDSLFFSLFTGLIFLWVFRSVAKKATAGVPGKLQCFVEIVVEFVDTNVKDTFHGRNPLIAPLALTIFCWVLLMNIMDLVPIDFLPYPAQHWLGIPYLKVVPSADVNITMAMALGVFALMIYYSIKVKGLGGFAKELALHPFNHPIMIPFNLLIEVVSLLAKPLSLGMRLFGNMFAGEVVFILIAAMLPWWLQWLGSLPWAIFHILVILIQSFVFMMLTIVYLSMAHEDSDH

>vfu_A00345_UniProt_F0LQH6
METLLSFSAIAVGIIVGLASLGTAIGFALLGGKFLEGAARQPEMAPMLQVKMFIIAGLLDAVPMIGIVIALLFTFANPFVGQLG

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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