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BMC type: GRM2


Organism: Providencia alcalifaciens DSM 30120. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

  PROVALCAL_01539 (fasta)
           PROVALCAL_01540 (fasta)
                 PROVALCAL_01541 (fasta)
                       PROVALCAL_01542 (fasta)
                               PROVALCAL_01543 (fasta)
                                   PROVALCAL_01544 (fasta) HMM03358reduct_1_eutgrm GRM2 (HMM details)
                                       PROVALCAL_01545 (fasta) HMMreg00440_1_GRM2 GRM2 (HMM details)
                                             PROVALCAL_01546 (fasta) HMMreg00486_2_GRM2 GRM2 (HMM details)
                                                 PROVALCAL_01547 (fasta)
                                                  PROVALCAL_01548 (fasta)
                                                    PROVALCAL_01549 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                      PROVALCAL_01550 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                        PROVALCAL_01551 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                                    PROVALCAL_01552 (fasta) HMMalddh_2_egra GRM2 (HMM details)
                                                                      PROVALCAL_01553 (fasta) P_clearBlue GRM2 (HMM details)
                                                                              PROVALCAL_01554 (fasta) HMM00465alcdh_3_mix GRM2 (HMM details)
                                                                                                         PROVALCAL_01555 (fasta) HMMgre_1_grms GRM2 (HMM details)
                                                                                                                PROVALCAL_01556 (fasta) HMMgreae_1_grms GRM2 (HMM details)
                                                                                                                   PROVALCAL_01557 (fasta) H_grassGreen GRM2 (HMM details)
                                                                                                                        PROVALCAL_01558 (fasta) HMMptac_3_eut2 GRM2 (HMM details)
                                                                                                                             PROVALCAL_01559 (fasta) HMM02441_04 GRM2 (HMM details)
                                                                                                                                PROVALCAL_01560 (fasta)
                                                                                                                                  PROVALCAL_01561 (fasta)
                                                                                                                                    PROVALCAL_01562 (fasta)
                                                                                                                                         PROVALCAL_01563 (fasta) HMMreg12833_4_GRM5 GRM5 (HMM details)
                                                                                                                                           PROVALCAL_01564 (fasta)
                                                                                                                                                       PROVALCAL_01565 (fasta)
                                                                                                                                                        PROVALCAL_01566 (fasta)
                                                                                                                                                                  PROVALCAL_01567 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      3x H_brightSkyBlue
       H_grassGreen

BMC-P(map on tree)

       P_clearBlue

(complete list of loci)

Protein sequences:

>PROVALCAL_01539_UniProt_B6XDW4
MPLVLSGGIIVYRDNSLNAIRIITHYIQRDVKENMTLVKLFRETQIQIQSMKLIT

>PROVALCAL_01540_UniProt_B6XDW5
MTETTSLTPLVELKSLNKGFDGKQIISELDLTIRNGEFLTILGPSGCGKTTVLRLIAGLEDVDDGQIILDGQDITDIPAEQRFVNTVFQSYALFPHMTVFENVAFGLRMQKTPKADIQKRVEQALHMVQLADFAERMPNQLSGGQQQRVAIARAVVNRPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFIFVTHDQEEALAMSDRIIVMREGKIEQDGTPREIYEEPKNLFVAQFIGEINIFDAKVLHRIDEQRIRANVEGHECDIFTDLSVTEGQHLNVLLRPEDLRVEEVNDADNHPGLIGYVRERNYKGMTLDSVVEMEDGKIIMVSEFFNEDDPDVDHSLNQKVAVTWVESWEVVLDDHS

>PROVALCAL_01541_UniProt_B6XDW6
MIIRKHKILQNVIITGVVAWLLLFVFLPNLMIIGTSFFTRSDTNLVDLVFTWDNYIRLSDPMYAQVMLHSLNMALIATFFCLVIGYPFAFILARLPKRIQPLMLFLLIVPFWTNSLIRIYGLKVFLSTKGYLNDFLLWVGIIDKPLKLMYTPEAVVLGLIYILLPFMVMPLYSSIEKLDKSYLEAARDLGANKCQTFVKIIIPLTMPGIIAGCLLVLLPAMGLFYVADLMGGAKNLLIGNVIKSQFLNIRDWPFGAATSIFLTVMMGLLLYVYYRAAKLLNKKAYEE

>PROVALCAL_01542_UniProt_B6XDW7
MIGRILRGGFMTTIYAYLYIPIIILIVNSFNESRFGIQWQGFSTKWYELLSNNDSLLEAAGHSLTMAVLSATFATIIGTLTAVALFRYRFRGKPFVGGMLFVVMMSPDIVMAISLLVLFMILGVSLGFWSLLFSHITFCLPFVVVTVYARLKDFDVKMLEAARDLGAGEFTILRKIILPLALPAIVAGWLLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATVLLLMSLILVCLSQWVMRDKHGKNAVAKPSKR

>PROVALCAL_01543_UniProt_B6XDW8
MKKWSYLLAAGLMAASIGTATAADDNKNVLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNESMYTKLKTYKEGAYDLVVPSTYFIDKMSKEGMLQKIDKSQLPNFKNLDPNLIHKEFDPNNDYSVPYIWGATGIGINGDAVDPKSVTSWADFWKPEYKNSLLMMDDAREVFQVALTKLGYSGNTTDPKQIEEAYNELQKLRPNILAFNSDNPATPYIEGEVDVGMLWNGSAFVARQAGLPIEVVWPKEGGIFWMDSLAIPANAKNVEGAHKLIDFLLRPEIAAQVAESIGYPTPNLEAKKLLPTEIANDPSLYPSEEVLKKGEWQSDVGNTNILYEEYFQKLKAGR

>PROVALCAL_01544_UniProt_B6XDW9
MSNQYNIGVVVGSLRADSYNLKVAKAITKLFPSNFTFKFINIADLPLYNQEADQNVPAVVANFKSQIKASDGIIFATPEYNRSMPGVLKNAIDQGSRPWGDNSWDGIPAGVLGVSIGNISTAIAQQHLRNSLAFLNMPTMNQPECYLKWYDGMVDDHDNISPKSKDFLQPWADNFAKFVIHNSAR

>PROVALCAL_01545_UniProt_B6XDX0
MNTLAHPRKKDPIKRQEELLNAARVIAGREGIAALSLNAVAREAGVSKGGLMHHFPSKQELIHALFIQLLDIMDVRIAAIMANDSDPYGRFSRAYLHYVGELKDSDESFQLALLSLAMPTEPVLRKCWRDWMLGHLAQGDAFDNGYLGALVRYAADGLWLSALTEGPTLSRQERDAIIQRLTQISFEETH

>PROVALCAL_01546_UniProt_B6XDX1
MKYKINAFIIYDAVDGTLSLKKDEVDTQLSITANALLFYMIQKKGVVSRDEVLKAIWDDNGLVSSNSNLNQYISLLRKTFRQYGIENIIVTVARGRLEFNSEVLLEVLDEETLNTTHLLNSLSQIQKAEVMLAPSSETKPTESPSDPLPHAISKQKREICWYLASAAFLCCAILLATMSYFSSQPSAPMILPTLEHASCDVLSNEKMINGVVADNYVQNFDKVRKNLNLVCNDKERFVFFYGDKLQKNGLGRVFLAHCAANESNPFSYCDNYFYYSWKP

>PROVALCAL_01547_UniProt_B6XDX2
MKISGKLLCVLSALIFTGVVIYTQSVVLSNKNSGEMACSTKGIMRFENMKDENVNGNIHFNFGANGEGSIVVEGYTTSSAGWLYLQRYVKFKYTSKRISPTERHYNISHWEASASSIDESPDVIFDYFMREMSDSHDGLFINAQKLNDKALLLSSINSPLFICTPKLGSKFN

>PROVALCAL_01548_UniProt_B6XDX3
MVFYSNYLHIMDLYFVLFFGDYSDFEAKSCVQLITTQTQLA

>PROVALCAL_01549_UniProt_B6XDX4
MGDALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVKGDVGAVKAAVDSGVESAQRVGEVVTSLVIARPHNDINKIVIKHKA

>PROVALCAL_01550_UniProt_B6XDX5
MGDALGLIETQGLVACIEAADAMCKAANVVLIGYENVGSGLVTAMVKGDVGAVKAAVDSGVESASRIGTVVTSLVIARPHSDIQKIVSQYKVAE

>PROVALCAL_01551_UniProt_B6XDX6
MKEALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVKGDVGAVNAAVESGVEAAKRVGTVVTSRVIARPHNDIGKIAQQHKA

>PROVALCAL_01552_UniProt_B6XDX7
MVALDKDLQSRQLARELVRNAKQAQKTFATFSQEKIDSIVKHIATESARHAEELAKMANEETGFGKWQDKVLKNTFASVRVYEHIKDLKTVGIINDDKINKVMDVGVPLGVITALVPSTNPTSTIIYKTLIALKAGNAIVFSPHPNAKACSFRTLDIVKKAALEAGAPAGIVDGVTMLTLEATKELMHSKDVSLILATGGEGMVRAAYASGTPTISGGPGNGPAFIERSADIKKAVSDIITSKTFDNGVICASEQSIIVERCIYNDVHRELLAQGAYFMNEDEAKRMASMLLRANGTINPDVVGKDAITLSQRAGFSVPANTRVLIALQDTVSPKNPYSREKLCPILGMYVEEDWRSACHRVVDLLTNEGLGHTLVIHTQNEDVIRQFSLEKPVNRILINTPAALGGIGATTNITPALTLGCGAIGGGSSSDNVGPMNLLNIRKVGYGVRSIDDLRQPAPVNTPAYSTSPVTHGCQSSVSILDDDRFRQSQPAKVQGHSSATDNRFSNTVSHADVAEAVATHGDITEENVEQIIKAVLGRLNK

>PROVALCAL_01553_UniProt_B6XDX8
MILAKVIGHVVATQKCQELSGSNLLMITALGDDLNPLKDKTFVAVDSVGAGINDLVLAEEYFALNKDKYKAMSVVAIVEKVYRDGRE

>PROVALCAL_01554_UniProt_B6XDX9
MNQFFIKPRVQFGANALDYLSQVNAQHAFIVTDKAMVKFGLADEVIRRLTQQGISFSLYDDVVPDPEISSIVKGMKIMDSQYPDLVIALGGGSVIDAAKAVIYSLWHTRQDSHRTKPHFVAIPTTSGTGSEVTAFSVIKSHSEKLVLVDEFMLPDVAILDPVLVKSVPATITADTGMDVLCHAIEAYVSRSASDFSDALAEKAVQLVFAHLIDCYRDGSNLVAREKMHNASCIAGMAFTNASLGITHSLAHALGGVFHIPHGRANAILMAQVVAFNAGLEGCCETTAAKRYAELAQKLNLPASNVREGVESLIMAINVLKDEMNMPKGIHATGVNETDFNARLGEMVGQALRDSCTPTNPRDVNEKQIEALYRQSF

>PROVALCAL_01555_UniProt_B6XDY0
MNNERERTSGEANMAKYALTPRVKTLAERLSARNCSIITERANILETVRNQLTGAPQAIKPAQQFYEFIRHFPAFIAQDELIIGSQSSTPRGAIFHTEDEVHSQSIYEFLAGDSAIAAPDYLVVLNVGFAEIKNQLENRVRNIGSAVSRNSIDEANNCRAAIYACDAAIHFAQSLALRAENLASTEANSYRRAELQESAEVLRQVPAKPAQTFKEACQAFYLLQLILHLENGSYAVNPMGFDKAVYPFYQRDIEQGRLTPQQAYEIVESLWLKLAELSEVRATRAMDGYPMFDALKGGIYLNDPQVCINELSAMMLSAHENISAINAGLKVRLYCGQASTQPQYSAASASYVAPTAQQDNEFKVMEGLTPRLQRLRNRYLEARPSVSIYRALAFTEVVKNNPGLPPILLRAKAFRRACETAPILIQPEELIVGHPCGKARAGAFSPDIAWRWVVDELDTMSTRPQDPFVISEEDKKVIREEIAPFWEGRSLDEICEAQYREAGVWEFSGETFVSDLSYHQINGGGDTCPGYDVLLFTKGMNGIKADAQARLAELSMQNPEDIDRIYFYKASIETCEGVVAYAHRIAEHARELASQETDQKRREELLTIAQVNENVPANPPKTLQEALQSIWTVESLFEIEENQTGLSLGRLDQYCFPMYESDIQSGRLTQDQALEMMQAFIIKCAELMWMSSELGAKYFAGYQPFINLTVGGQKRSGGDACNDLTYLIMDAVRFVKVYQPSLACRIHNQSPQKYMEKIVDVVKAGMGFPACHFDDSHIKMMLRKGFDFEDARDYCLMGCVEPQKSGRIYQWTSTGYTQWPIAIEFVLNRGRMVLFDSHQGLDTGDLRNLKTFEDFDNAVKAQIAHIVRLSAIGTVISQRVHRDVAPKPLMSLLVEGCMEKGKDVAAGGAMINHGPGLIFSGLATYVDSMAAIRKVVYEEGRYTLEQVRDGLLANFEGYEELRRDCLNAPKFGNDDNYVDQYALDITEWTERECRKYDMLYSTLSHGTLSISNNTPIGELTAATANGRLAWMPLSDGISPTQGADKQGPTAIIKSISKMNVETMNIGMVHNFKFLKGLLDTPEGRNGLITLLRTASILGNGQMQFSYVDNEMLKKAQQEPEKYRDLIVRVAGYSAYFVELCKEVQDEIISRTVIEKF

>PROVALCAL_01556_UniProt_B6XDY1
MMNTAAEIRGRIFNIQKYSIYDGDGIRTLIFLKGCNIRCPWCANPEGLSSQFQVMFSHDKCVGCGKCVDVCPTGIHYMTTNEQGEAIHRVNRSIDCIGCRKCEEVCISDALDIMGKDVTVSEMMDIIMQDYDFYISSGGGVTIGGGEMSLQTDFAVELLRECKKMMINTAVETQGTTSLANYERLAEVVDLFLFDVKHIDTVEHKNLFGIGNENVRRNLERLMELGANVVMRMPLVRGYNDSFDAITGAIEYAMELSKRGNLNRIDILPYHQLGRGKYDKLDMIYPIKKDPTYSVEELDQLEAFFKTFDFDIRLVRH

>PROVALCAL_01557_UniProt_B6XDY2
MKSLGVIETYGLTSAIQAADAACKAASVEIVGYRKIGSGLVSVCFQGEISAVRTAVDHGASVVSHQNLLKGTLVIARPEESVITQLLSAKNTASEIEQCREASVRESSVETLENHVVVEPKAEVRKGKKS

>PROVALCAL_01558_UniProt_B6XDY3
MINQQLMGKILSRLAVPNSAAIMESPIAIPVGVSNRHVHLSQEDVTVLFGEGYQLTPFKDLKQPGQFAAKECVMVVGPKGSISKVRVLGPTRPKTQLEVSKADCFALGIKAPVRESGDLNESGNALLIGPAGYVNLSEQVICAQRHIHMNLMDARALNVVNGQRVCVRTEGERSLVFDEVVIRVDARFSLEFHIDTDEANAAGLRNNDSVFVVS

>PROVALCAL_01559_UniProt_B6XDY4
MTVFLLSAKYLANGGKMNEKIIEQIVSQVLQQLKQRVLVVLSPSQAYQQAVYQRLLSLSSMSFSFYATKEMLTQSTGNQSTGNQWKEIGQQFDINTFSVDKLAEFHCVFLPFLGSKVVSEVVNGLSVSEESEIILHALSQNIPILALKYHCCPDSDLNQILGLNKNEQYNDLIKENINKAISLGIQFDTFNNIENKILIRNDEASSENKVNQNRYITLNEVMNDPKEYSLNKNKLTDSAIDYLKSLKK

>PROVALCAL_01560_UniProt_B6XDY5
MSSKAKSWLWMLAVIISETSATSTLKMFDNSEGTTKSLLLGLIVILYVICYYSLSRAVKYIPVGLAYATWSGTGILMVSTLGMLFYGQHPDMAAIIGMGVIASGIVIMNLFSKMGADEAEPAENSEASLSSTNNVAH

>PROVALCAL_01561_UniProt_B6XDY6
MFTGFLWLALSIGSEITGTSMIKKTNSFSKLGPSILVIVAYCLCYFALTRAMGYIPVGVAYSLWCGFGIVGVTLVSMILYKQKPDVPAVFAMGLIISGGIIMNTFSTM

>PROVALCAL_01562_UniProt_B6XDY7
MQIIEWDDFTKVEMRIGTIIRAEVNSKAKKPAYVMDVDLGELGIKRSSAQITVHYTPESLIGKQVLCVCNFEVKRIAGIKSEVLITGAPDETGAIVLAEFNLPVPNGSRLA

>PROVALCAL_01563_UniProt_B6XDY8
MLLPELHYRQYSQEVISHQHDGQWQVVFAVSGAMEINMHRQHWLLNAGQGVVIPPSVSHAFSGQKGNQNYVLEMPATAQWALSERMTHFALTPAAIGLLNWLQHFPQAPEQNFAVARLLLAQLTPENRWIDELTHWIELRLHLPISCEDIASAFYMSVSTLQRKMKAETGGTVMQFLLQKRMEAAGSLLLTNQTIEHVATLVGYDSHSAFSHAFRKFYGKTPLEYRLKSLI

>PROVALCAL_01564_UniProt_B6XDY9
MSVIDLWAERHIQDALNKGELSNLNGEGKPLQLDDDSLVPEELRAGYRILKNSGYLPAELQQKKEALNLCHMLQQLSADDPNYVAINKQLALLELKLKQANINTDFLYGEYSATISQHVESK

>PROVALCAL_01565_UniProt_B6XDZ0
MEQKKQEGSRFLRTVEWLGNALPHPVILFIILIGILLVSSAVGQYFGISVPDPRPEGAKGRAEDGIIHIVSLLDAEGIRKILSNVVTNFTGFAPLGTVLVALLGVGIAERAGLLSAAMRLIVIKAPRKLTTVAIVFAGIMSNTAAELGYVVLIPLAAIIFHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITQQAARIIDPTYIVGAEANWYFMFASTFLITILGYFITEKIVEPQLGPYQGGGVDEDEDKLRASAEVTPLEKKALFWASVTFWGLAAVLALMVVPESGILRNQETGLVSNSPFLKAIVVFIFIFFAVPGIVYGYIAKTMRSDKDVVDAMASAMSTLGLYLVIIFFAAQFVAFFGWTNIGQVIAVKGANFLNSIDLHGGILFVGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYSPETIQAAYRIGDSVTNIITPMMSYFGLIMAIVVKYKKDAGIGTLVSMMLPYSIIFFIGWSLFFIVWVFILGLPVGPGSPIYFTPGS

>PROVALCAL_01566_UniProt_B6XDZ1
MACLIGYYWFFGSIVLNICCYLIITLKLNEELNLFAWLRQE

>PROVALCAL_01567_UniProt_B6XDZ2
MASIKQSALALMLGFAFSSQGIAATTIPFWHSMEGQLGEEVNDLVTRFNETHPDYKVVPTYKGNYEQSLAAGIAAFRSGNAPAILQVYEVGTATMMSSKAIKPVYEVFKEAGIAFDESQFVPTVSGYYSDAKTGHLLSQPFNSSTPVLYYNKEAFKKAGLNPDEPPKTWQDLAQYTEKLRESGMKCGYASGWQGWIQIENFSAWNGLPVATKNNGFDGTDAVLAFNTPDHVRHIELLQDMNKKGTFSYLGRKDEPTEKFYNGDCAIITGSSGSLANIRKHAKFDFGVGMMPYDAQIPTAPQNAIIGGASLWVMEGKDPATYKGVAEFMKFLAEPENAAKWHQNTGYLPITTAAYELTQKSGFYDKNPGADIATRQMLNKAPLPYTKGLRLGNMPQIRTIVDEELESVWSGKKTPQQALDASVERGNQLLRRFEKSTQ

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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