Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: GRM2


Organism: Escherichia coli. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

            NCTC9007_04926 (fasta)
                      NCTC9007_04927 (fasta) HMMreg00392_2_grm2 EUT2A (HMM details)
                                 NCTC9007_04929 (fasta)
                                    NCTC9007_04931 (fasta)
                                        NCTC9007_04932 (fasta) HMMreg00440_1_GRM2 GRM2 (HMM details)
                                              NCTC9007_04933 (fasta) HMMreg00486_2_GRM2 GRM2 (HMM details)
                                                 NCTC9007_04934 (fasta)
                                                   NCTC9007_04935 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                     NCTC9007_04936 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                       NCTC9007_04937 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                                   NCTC9007_04938 (fasta) HMMalddh_2_egra GRM2 (HMM details)
                                                                    NCTC9007_04939 (fasta) P_clearBlue GRM2 (HMM details)
                                                                            NCTC9007_04940 (fasta) HMM00465alcdh_3_mix GRM2 (HMM details)
                                                                                                      NCTC9007_04941 (fasta) HMMgre_1_grms GRM2 (HMM details)
                                                                                                             NCTC9007_04942 (fasta) HMMgreae_1_grms GRM2 (HMM details)
                                                                                                                NCTC9007_04943 (fasta) H_grassGreen GRM2 (HMM details)
                                                                                                                    NCTC9007_04944 (fasta) HMMptac_3_eut2 GRM2 (HMM details)
                                                                                                                         NCTC9007_04945 (fasta) HMM02441_04 GRM2 (HMM details)
                                                                                                                            NCTC9007_04946 (fasta)
                                                                                                                              NCTC9007_04947 (fasta)
                                                                                                                                     NCTC9007_04948 (fasta) HMMreg00126_1_mix GRM3B (HMM details)
                                                                                                                                               NCTC9007_04949 (fasta)
                                                                                                                                                         NCTC9007_04950 (fasta)
                                                                                                                                                          NCTC9007_04951 (fasta)
                                                                                                                                                              NCTC9007_04952 (fasta)
                                                                                                                                                                  NCTC9007_04953 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      3x H_brightSkyBlue
       H_grassGreen

BMC-P(map on tree)

       P_clearBlue

(complete list of loci)

Protein sequences:

>NCTC9007_04926_UniProt_A0A229D0H0
MNNNNTPRSPTLVESLLPILAMILLLGFGYAAFDLPPEPLMVLSTVIAALLVKRLGYGYNAILESISQKIAKTMPALLILISVGLLIGTWMIGGTIPLMIYYGLNLINPSMIYVTALLVTAVVSVCTGTSWGSAGTVGVAFMGVAIGMEANLAATAGAIVAGAYFGDKLSPLSGDTNLAAMAAQIDLYEHIAHLLYTTLPSLILSAFVMTLYGMNSELGGSTIPEKIQLITEGLKGIYHFNLLLLLPIAIVLYGSITKKPTIPIMLVSALVAMINASVIQGFALHDIVKSAVDGFNVSMLTDKNVNPLLGNLLNRGGMNSMMSTLLICFCALSFAGTLALSGALEVIVHNLLKLVHSTGTMILATIACGLTMISVTCNGQISILIPIEMLRSAYIERGLHPKNLARTVEDSATIFEPILPWTAAGAYMAGTLGVATLSYLPWAILCWSGIFFATLWGFTGFGIARLSKEKQQQLMMETINESK

>NCTC9007_04927_UniProt_A0A229D176
MKVYNFDKVISRDGTYSAKYNKKGRDIIPLSVADMDIPVADFIVSELSVANQKGIYGYTLLSDDWQQVAAQWYQRHYSWKVNPEHIVFCPRVVQAVSLFIQNFTQPGDAIVSLTPAYHPISHAVEVNHRVLLESALLYRDHHYEIDFADLEDKFKMACCFILISPHNPTGTIWSEDNLRKIASLAEKYNVFIISDDVHADFNFTQKQHQTISSISSYVAQNSFICTSPAKTFNMAGLEVANIVIANDKYREQFKLALIAAGIHNPGYFSVPAFLCAYRHGDSWLAALKDYLVENRSWVQSFCQAHFPDWFVASGGGTYMLWIDYRAMNISEEQLRHWFVSLAGVEMSWGSDFGDEGLGFFRVNIATPRSNLTQAFERIYQSIPFTTGVSLHE

>NCTC9007_04929_UniProt_A0A0J2BNC6
MIISEMQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAHTPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEGDLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQAEAIREECRGVLEGSLKLRLNMDKTKITHVNDGFIFLGHRIIRKRSRYGEMRVVSTIPQEKARNFAASLTALLSGNYSESKVDMAEQLNRKLKGWAMFYQFVDFKAKVFSYIDRVVFWKLAHWLARKYRTGIASLMRWWCKSPKPGQSKTWVLFGKTNHGKLSGEILYRLVGQGKKLFRWRLPEGNPYLRTETRNTYTSRFTEVAMAFASI

>NCTC9007_04931_UniProt_A0A2X1LZQ7
MAFIIDVFAGYIVGGRVSSSMETTFVLDALEQALWAHRPSGTIHHSDKGSQYVSLAYTERLKEAKLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNRAEVELSTLTWVDWYNNRRLLGRLRHTPPAEAEKAYYASIGNDELAA

>NCTC9007_04932_UniProt_A0A376NAG5
MLLPMNTETQHRKKEPIRLYQQLLESAAMIAGRDGIAALSLNAVAREAGVSKGGLLHHFPNKQALIYALFARLLAIMEEAIAVLMQKDNISYGRFTRAYVNYLSALTDTQESRQLMVLSLAMPDEPVLRKCWRDWMLGHLANGDELDNSPTGTLVRYTADGIWLSELTEGITMSPEHRQALVDSLNKMTLPA

>NCTC9007_04933_UniProt_Q8G9V3
MRYNINARFIYDATDGTLTLPQSTEPDCQLSITSCALLNFFLHHTDIVSREEVLTKVWDNNGLTSSNSNLNQYLSMLRKTFRHYGIDNIIITVARGYLQLNPNVSIEPLDEAPAPPAIIEPSIIPDVDVPTSSEDTESSPPTLAPVTHRHDAYWYFAGACLLTISILLVAFNLFGISEARPIALTQLSHSQCELLASDEMRRSVSVKAYEKNYDEVRKRLNIACKPSERFLFFYGDRLETNGLGRVFLAHCAMHENNPFSYCDNYFYYSWKL

>NCTC9007_04934_UniProt_A0A210GPI2
MRIAPRTFFAISALAFIVASGFSFWRLSPAENTGIMSCSTKGIMRFENMEKENVNGNIHFNFGSQGKGSMVVEGYTDSAAGWLYLQRYVKFTYTSKRVSATERHYRISQWESSASSIDESPDVIFDYFMREMSDSHDGLFLNAQKLNDKAILLSSINSPLWICTLKSGSKLD

>NCTC9007_04935_UniProt_A0A229D1M5
MGDALGLIETKGLVACIAAADAMCKSANVELIGYENIGSGLVTVMVKGDVGAVKASVDSGLESAQHIGEVVTSLVIARPHNDINKIVTKHKA

>NCTC9007_04936_UniProt_Q8G9V6
MGDALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVKGDVGAVKAAVDSGVESAQRIGEVVTSLVIARPHNDINKIVSHYKITD

>NCTC9007_04937_UniProt_Q8G9V7
MREALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVKGDVGAVNAAVDSGVEAARRIGEVVTSRVIARPHNDIEKIASQHKA

>NCTC9007_04938_UniProt_A0A229EDF8
MIELDTDLRSRQNARVLVRNAKKAQAIMATFSQQQIDAIVKNVAQEAAHHAEALAKMAAEETGFGNWQDKVLKNRFASLRVYDAIKDMKTVGIIHDDQQQKVMDVGVPLGVICALVPSTNPTSTIFYKTLIALKAGNAIIFSPHPGARQCSWKAIEVVKRAAEAAGAPAGIVDGVTELTLEATQELMHSKDVSLILATGGEGMVRAAYASGTPTISGGPGNGPAFIERSADIHHAVKDIITSKTFDNGVICASEQSIIVERCIYNEVHRELEAQGAYFMNEDEAAKMAALLLRPNGTINPKAVGKTALYLSQMAGFCVPASTRVLIAEQTTVSHKNPYSREKLCPVLGLYIEEDWKAACHRVVELLTNEGLGHTLVIHTRNQDVIRQFCLEKPVNRILINTPAALGGIGATTNITPALTLGCGAVGGGSSSDNVGPMNLLNIRKVGYGVRSIDELRSPGSRAEPQPAIAAPIVDPHRSILDDARFTSPAPATTSADDRFTVATTDPEGEINEQNVERVIRQVLERLGK

>NCTC9007_04939_UniProt_A0A376NAQ8
MILAKVTGHVVATQKCDELRGSNLLLITQLDDNQQLMKDRSWVAVDSVGAGVYDVVLAEEYFALNKDRYKAMSVVAIVEKVFRDA

>NCTC9007_04940_UniProt_A0A229D1N4
MSEFLLKPRICFGQDALSVLDELTACHVLLVTDQAMVKFGLAERVTQRLCARGIDWQVWDDVVADPDIATVVRGMKLMDSCYPDLVIALGGGSVIDAAKAVIFALAQTRPEAGRERPCFVAIPTTSGTGSEVTSFSVVKAHAEKLVLVDSSLLPDIAILDPSLVASVPPAITADTGMDVLCHALEAYVSLAASDFSDALAEKVVQQVFSYLPGCWRNGQDLQARAKMHNASCMAGMAFTNASLGITHSLAHALGGVFRVPHGRANALLMAHVVAWNADYHGQCDTLAARKYARLAHLLDLPASTPREGVTSLLVAIQTLKDEMNMPRGINDTGVNAADFDQRLAEMVAQALRDSCTPTNPREPDARALTELYRQAWSGNIAQCH

>NCTC9007_04941_UniProt_A0A210GPH4
MANYNLTPRVKVLAERLLAHPSTLCVEHAGILSGLDGDIAGIPAAVKPARRFYELMRQLPLAVSPDELIVGNQTHRPHGAIFHDESTAHRPSVFQFLNLNSDLDAPDYKLVIEKGVLAIKQQLEEKTRSLGSAVSRSGMDEVNACRAAIYACDALMQLAQNLATSAEKLAATETNAYRKAELSESAAILHHIPARPARSFKEACQAFYLFQLALQLDNGSYAVNPEGADKALLAYYQHDIANGLLTEAQAYEIVECLWFKLAELSEVRAACTIDGYPMFDALLHGASLENAVINPLSEMFLNAQRNLSALNLPIRLFHGAHKTVTTLCAACNETPVLEGLTPRIQRLRNHYLTVRPSVSIYRALAFTEVVKANPGMPTILLRAKAFRHACETAPILIQDDELIVGHPCGKPRAGAFSPDIAWRWVRDELDTMSTRPQDPFEISEEDKKTIREEIVPFWEGRSLDEICEAQYREAGVWSFSGETFVSDLSYHQVNGGGDTCPGYDVLLFTKGMNGIKADAEAHLAELSMENPEDIDRIYYYKAAIDTCEGVINYAHRIAARARELAAVEQNAQRRAELLTIAEVNQNVPANPPKTLQEALQSIWTVESLFEIEENQTGLSLGRVDQYCYPMFEADIREGRLTHEGALELMQAFIIKCAELMWMSSELGAKYFAGYQPFINLTVGGQKRSGGDACNDLTYLIMDAVRFVKVYQPSLACRIHNQSPQKYMEKIVDVVKAGMGFPACHFDDSHIKMMLRKGFDFEDARDYCLMGCVEPQKSGRIYQWTSTGYTQWPIAIEFVLNRGRMVLFDSYQGLDTGDLKDLRTFEDFDAAVKKQVAHIIRLSAIGTVISQRVHRDVAPKPLMSLLVEGCMEKGKDVSAGGAMVNHGPGLIFSGLATYVDSMAAIRKLVYEDKKYTLEQIRDALLANFEGYEGLRRDCLNAPKYGNDDNYVDQYALDITEWTERECRKYKMLYSTLSHGTLSISNNTPIGELTNATPNGRLAWMPLSDGISPTQGADKHGPTAIIKSVSKMNVETMNIGMVHNFKFLKGLLDTPEGRHGLITLLRTASILGNGQMQFSYVDNEVLKKAQQEPEKYRDLIVRVAGYSAYFVELCKEVQDEIISRTVIEKF

>NCTC9007_04942_UniProt_Q8G9W2
MSANKELSGRIFNIQKYSIYDGDGIRTLIFFKGCNLRCPWCANPEGLSSQFQVMFSQDKCINCGDCVNVCPAGIHYRAEVNGEMKHFVNRNKDCIGCRKCEEICTQNALDIMGKDVTVSELMEIIMQDYDFYVSSGGGVTIGGGEMSLQTDFAVALFSECKKMMINTAVETQGTTPLANYQKLAPVTDTFLFDIKQIDSNHHKTLFGIGNEGVRRNLEWLVDSGANVIVRMPLIRGYNDSWEAITGAIDYVQKLAKRGNIRRIDILPYHQLGRKKYERLEMPYPIVEDPSYSVEELDKLEAFFAQFDFDIRLVRH

>NCTC9007_04943_UniProt_A0A210GPH3
MNSLGVIETRGLVAAIQAVDAACKAAGVTCIGYRKVGSGLVTVCFDGEISAVYTAIERGIAVASATDHQAKSLVIARPERCVVEALSNLKGHPPRVESGQKPHAELPTVAEMAVCEETAEVSTDTETAMPVPEKEVQAPIVEVKSHGHKKGKKA

>NCTC9007_04944_UniProt_Q8G9W4
MIDALLQEKITTRLIDTAPTIPVGVSNRHVHLSQQDVEALFGVGYQLTPFKPLRQPGQFAAEECVTVVGPKGSLTHVRVLGPVRPTSQLEISRADCFTLGIKAPVRESGQLENAGDALLVGPKGHVELHSQVICAWRHIHMSPQDARLLNVSNGQKVSVRSHGERQLTFDEVVVRVRNDFALELHIDTEEANAAGLKNGAQVTLIR

>NCTC9007_04945_UniProt_Q8G9W5
MTEQQIDTIVNLILQRLQPAVLVMVTSADGYRDLIHQRLARCGERLHLALDETISDSERWQQIGDVIPAKTWQHKLPSTPYKALLLPFLSYPLAVDIVNGTLQSPVAQRVHDALLAGIPVLALRYYCDPHSELNALRGTVHSDYAAHLSATLTGLSECGITLCSMNEMLEKLATDVSSQSPVSHHRRYLTVTDIVNNPALAKSPDAVLTDAAVDFLKAQKK

>NCTC9007_04946_UniProt_Q8G9W6
MSSKTKCWLWMLLVILSETSATSTLKMFDNSEGMTKTLLLALIVVLYCICYYSLSRAVKDIPVGLAYATWSGTGILMVSTLGILFYGQHPDTAAIIGMVIIASGIIIMNLFSKMGSEEAEETPVTNLDKKIAN

>NCTC9007_04947_UniProt_Q8G9W7
MFNIGFLWLALSIGSEITGTSMIKKTNGFRRLWPSVLVVCAYSTCYFALTRAMSTIPVGVAYSLWCGFGIVGVTIFSMILYKQKPDLPAIFSMLLIISGGIIMNVFSNM

>NCTC9007_04948_UniProt_A0A2X1KNS9
MEPLREIRNRLLNGWQLSKLHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVELTHEGKRVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTVLTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEEILPVCSPEYAQRHDLTNTVINLSHCTLLHDRQAWSNDSGTDEWHSWAQHYAVNLPTSSGIGFDRSDLAVIAAMNHIGVAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFITWLREQVCQSCQYQ

>NCTC9007_04949_UniProt_A0A2X1L7J6
MHSQIWVVSTLLISIVLIVLAIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKILPSLGATLFTILLPIALMLVKTIAELNMARESGLYTLLEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII

>NCTC9007_04950_UniProt_A0A2X1LZN2
MENAKMNSLIAQYPLVEDLVALKEATWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPTMQKRLEKEYQQPICGQLLLKKDSHLPISGSIKARGGIYEVLAHAERLALEAGLLTLEDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYMPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNATHLVWATGGGMVPEEEMEQYLAKGTD

>NCTC9007_04951_UniProt_A0A0A2NAF7
MLTSITGHDSVLLRADDPLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKSEVEQWMQQRIEESRGAAA

>NCTC9007_04952_UniProt_A0A232MPS5
MNAIPYFDYSLAPFWSSYQSKVIGVLERALREQSGSRIRRILLRLPCEYDNTFNSRTTWFGMDFIETVSALMNAKPGRDLCWLLTRHPEKPEYHVVLCVRQEYFDGPELDRLILDAWSNVLGFASPGEAAPYQKQITRDVVLDSRSPDCEERLKELIWAFSDFARDRRGVHDPEARCLAGNPWYPVAGQL

>NCTC9007_04953_UniProt_A0A061KII4
MPKSYTPNWFFTALLDNHINQMMARYSCLRALRMDFFYRKDTPDFLQPDHRWLELQLRMLLEQVEQFENIVGFFWVIEWTADHGFHAHAVLWIDRQRVKKIYPFAERITECWRSITHNSGSAHRCTYQPHYTYNINIPVRHNDPESIDNIRGALHYLAKEEQKDGLCAYGCNEVPERPAAGRPRNPHF

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
© www.kerfeldlab.org, 2022