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BMC type: GRM2


Organism: Providencia rettgeri. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

      EGJ46_01640 (fasta) HMMreg00392_1_rmm1 SPU6 (HMM details)
             EGJ46_01645 (fasta)
                       EGJ46_01650 (fasta)
                                EGJ46_01655 (fasta)
                                            EGJ46_01660 (fasta)
                                               EGJ46_01665 (fasta)
                                                  EGJ46_01670 (fasta)
                                                       EGJ46_01675 (fasta) HMMreg12833_4_GRM5 GRM5 (HMM details)
                                                         EGJ46_01680 (fasta)
                                                           EGJ46_01685 (fasta)
                                                              EGJ46_01690 (fasta)
                                                                   EGJ46_01695 (fasta) HMM02441_04 GRM2 (HMM details)
                                                                        EGJ46_01700 (fasta) HMMptac_3_eut2 GRM2 (HMM details)
                                                                           EGJ46_01705 (fasta) H_grassGreen GRM2 (HMM details)
                                                                                  EGJ46_01710 (fasta) HMMgreae_1_grms GRM2 (HMM details)
                                                                                                             EGJ46_01715 (fasta) HMMgre_1_grms GRM2 (HMM details)
                                                                                                                      EGJ46_01720 (fasta) HMM00465alcdh_3_mix GRM2 (HMM details)
                                                                                                                        EGJ46_01725 (fasta) P_clearBlue GRM2 (HMM details)
                                                                                                                                     EGJ46_01730 (fasta) HMMalddh_2_egra GRM2 (HMM details)
                                                                                                                                       EGJ46_01735 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                                                                                                         EGJ46_01740 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                                                                                                           EGJ46_01745 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                                                                                                               EGJ46_01750 (fasta)
                                                                                                                                                     EGJ46_01755 (fasta) HMMreg00486_2_GRM2 GRM2 (HMM details)
                                                                                                                                                         EGJ46_01760 (fasta) HMMreg00440_1_GRM2 GRM2 (HMM details)
                                                                                                                                                             EGJ46_01765 (fasta) HMM03358reduct_1_eutgrm GRM2 (HMM details)
                                                                                                                                                                EGJ46_01770 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      3x H_brightSkyBlue
       H_grassGreen

BMC-P(map on tree)

       P_clearBlue

(complete list of loci)

Protein sequences:

>EGJ46_01640_UniProt_A0A3R8WD93
MSKNYILKYQEIYLDIKNKIDQQEWQEEDVIPTERELAEVYQTSRTTIRKTIELLKQDGYLFSQHGRGTFVLPEKSRLSRRSLHSFTDDISSRGGTPSQEILEIGFVPLSNIIRQNLQLSLHERTIFRIKRIRFSETTPMGIHTSYIPLPHNMPIEKETLLEYGSLYKVLKEKYNLFPLEAYESISARLASSSERSFLELDHEGVVLACTRITLSEALKPMEYVEMVYPASRYTYNMKINRDSFGRNK

>EGJ46_01645_UniProt_A0A427HPN5
MFNQKNKAECSRRKPYYLSLSTLAFTTIFISSSYAGGGYLDYRNEYLTKQRVSNDRVKMGYFFDSGLDVHLELMWKQKNNDKRGELPANRDSWGHFENNGHGIILNYPLRFEPLKNWTFTPTFSVYSSSYWTTYEPGLEVAYKINADHRIRSRFRVDLDHPSSSNSADKQKTYRTDFWYDWRPKDLPIGITYNFVWYDTENVRWDNKKRDYAQDIKVQYTIENWTPYIAIGDVKGYSKYSDNRQLRLRTGISYSF

>EGJ46_01650_UniProt_A0A3R8W2D3
MKLSIYEKVGFGAGDMAIAIVMISMQLLLAYFYTDIYGLSAADTGVLFIIVRFVDALVDPMIGIFTDRINTRWGRYRPYLLFLAVPFGFAIYLMFVTPDIAYTGKLIWAYTSYILLTIIYTFIAIPYVSLISVISDEPLDRLSANGYRFVMTKIAAFIVTIIVPLMAVYFGQGQLAKGYQSSMAIMGILGTVLILFCFFSTKERVSVNIEKTPIKQQVKLLFKNDQWIILGIVLTLIMCGGTIRASVSAYYAKYYLSGGDSLIPAFLTTGVIASVLAMIVSTWMTKFYDKIKLFRYSQIATFLFSTLMYFMVGQGDIALAFIFYFAVSFLCDLQLPIFWSSIAESVDYGEVKTGTRVSGLAFGGILFFQKFGMGVAGGALGFALAYIGYQPDVEQTVSSLIGISLMMTLIPAIFHLLVGLLMFKFIINNQYYQKIKNELLKIA

>EGJ46_01655_UniProt_A0A3R8Y7A5
MNIDQQSYLPKVILHEHLEGSVTPKIAKQLAMNNAINLPSSLFYPVGEYDDIQFPDGRYFYDESQFNEFITIYDRVASLIQTADDYYLITEDYLTRNAQQGLIYCELLISPYHMSASEVNGKVSWDSTRYMDRLLAITRAIEDVNQLYPLIVRLHAVGVRHLGPDIVYQTLQFVQQNPHDVITGFNIAGNELSYQFADFSMSHQLAKQLGLGRSYHAGEIGSDQQIQNAVKAGAVRIGHGIRAIDNEALIKQLIENKILLEISMTSNRILVPELNGDIHQHPIRKLYDKGVRIAINTDDAGIFGTDINKEYQIAQQTFQFTRIELLDITLCSLEAAFLEDEYKELALQQVYKTFTEDDIKQLQKYVDRPSISSALVSRLNNHLHYLKNYLLP

>EGJ46_01660_UniProt_A0A3R8X010
MEQKKQEGSRFLRTVEWLGNALPHPVILFIILIAILLVSSAIGQYFGVSVPDPRPEGAKGRAEDGIIHIVSLLDAEGIRKIIANVVTNFTGFAPLGTVLVALLGVGIAERAGLLSAAMRLVVTKAPRKLTTMAIVFAGIMSNTAAELGYVVLIPLAAIIFHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITQQAAQIIDPTYIVGAEANWYFMFASTFLITILGYLITEKIVEPQLGPYTGGAVDEDENSLYASANVTPLEKKALFWASVTFWGLAAILALMVVPENGILRNQDTGLVSNSPFLKGIVVFIFVFFAVPGIVYGYIAKTMRSDKDIVDAMAGAMSTLGLYLVIIFFAAQFVAFFGWTNIGQVIAVKGANFLNSIDLHGGVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPETIQAAYRIGDSVTNIITPMMSYFGLIMAIVVKYKKDAGIGTLVSMMLPYSIIFFIGWSLFFIVWVFVLGIPVGPGSPIYFTPGS

>EGJ46_01665_UniProt_A0A3R8W8D4
MSVIDLWAERHIQAALNKGELSSLDGEGKPLQLEDDSLIPPELRAGYRILKNSGYLPVELQQRKDALTLSQMLQSLSIDDPNYTSISKQLALLELKLKQANVNTDFLHGNYAVSISEQITRKSDTK

>EGJ46_01670_UniProt_A0A427HPR3
MEQKQYSNKWQKRFDFFDKHGAPDTPEFKAALKAASFGERILINMNIFAFFFGIIYFLILGLWKKGLVMLGITLGVAIVLNIIDFMIGGTIPNAVFTGVSVGMSALWAMVANYAYYIKETKGLDNWNPFEGIRML

>EGJ46_01675_UniProt_A0A3R8X4V1
MRLPELHFRQYSDEVISHQHDGQWQVVLSLSGQMEINMYRQHFLLNAGKGVVIPPSVNHAFSGQLGNQNYVLEMPNTAQWALNEKMTQFTLTPAAVGLLSWLQSFPQAPEHNFTVARLLLAQLKPENKWIDEVSQWVELRLHHPISCEDMAIAFCMSVSTLQRRIKAETQLTAMQFLLQKRMEIAGSLLLTNTSIEQIALSVGYESHSAFSQAFRRFYGRTPNEYRIQGVNLVPCKN

>EGJ46_01680_UniProt_A0A427HPP0
MNIIEWDDFTRVEMRVGTIISAEVNIKAKKPAYIMEVDLGELGIKRSSAQITVNYTPEDLIGKRVLCVCNFEVKRIAGIKSEVLITGAPDETGAIVLAEFNLPLPNGALLA

>EGJ46_01685_UniProt_A0A1J0EC65
MFTGFLWLALSIGSEITGTSMIKKTNSFSKLGPSVLVIIAYCLCYFALTRAMGYIPVGVAYSLWCGFGIVGVTLVSMVLYKQKPDFPAVFAMGLIISGGIIMNTFSTM

>EGJ46_01690_UniProt_A0A3R8XH95
MSPKAKAWLWMLAVIISETSATSTLKMFDNSEGMTKSLLLALIVVLYVICYYSLSRAVKYIPVGLAYATWSGTGILMVSTLGMLFYGQHPDTAAMIGMAVIASGIVIMNLFSKMGSDDPEETEVSQDDTESSLLSAKNKTAH

>EGJ46_01695_UniProt_A0A3R8XVI6
MNEKLIEQIVQQVLRQLKRQVLVVLSPVEGYQQAIYQRLAQLDSVSFSFYATASMLQSSDVEKWAELGSVVDKNVVSINTLSHYGSLFLPFIDAKVVGEIANGLFVSEESELVLHALSQNMQIFALKYHCCPESELSQVLGLNKNENYNRLIKENISKAINLGIRFGSLNEIEKNFFINEVTEDLKPELNNKHPNRYITLKEVMNNPRGYFANENKLTDSAIDYLKSLKK

>EGJ46_01700_UniProt_A0A427HPR2
MMNEQLMGKILARLSAYTPAQNGVSNIAIPVGISNRHVHLSQQDVEALFGQGYQLTPFKDLKQPGQFAAKECVMVVGPKGSISKVRVLGPVRPKTQLEVSKADCFALGIKAPVRESGDMTNSGNALLIGPAGYVNLESQVICAQRHIHMSVMDSRALNVVNGQKVNIRTEGERSLVFDEVIVRVDERFSLEFHIDTDEANAAGLRNNDSVFIAG

>EGJ46_01705_UniProt_A0A3R9CU99
MKSLGVIETRGLTSAIQAADAACKAASVEIVGYRKIGSGLVSVCFQGEISAVRTAVDHGIEVIASSQLLVGSLVIARPEESVISKLLTVKSKKGELEKSVEAKAEKLVEKAVVEAKTEAPVAEVKTDINVKDIKNDPRKGKKS

>EGJ46_01710_UniProt_A0A3R8WDA2
MMSVAEMKGRIFNIQKYSIYDGDGIRTLIFLKGCNIRCPWCANPEGLSSQFQVMFSHDKCVNCGKCVDVCPTGIHYKTINEQGEQIHRVNRSIDCIGCRKCEEVCIGGALDIMGKDVTVAEMMEIIMQDYDFYISSGGGVTIGGGEMSLQTDFAVALLRECKKMMINTAIETQGTTSLENYEKLAEVVDLFLYDIKHIDTAQHKNLFGIGNENVRRNLERLVDLGANIVVRMPLVRGYNDSFDAITGAIHYAMELSKRGNVKRIDILPYHQLGRGKYDKLDMIYPVKQDPTYSAEELDQLEAFFKQFDFDIRLVRH

>EGJ46_01715_UniProt_A0A427HPM4
MNKYALTPRVKMLAERLSARNSSIITERANILEALGNQLSGAPQAIKPAQRFYEFIRHFPTFIGQDELIIGSQSSTPRGAIFHTENEINSHSIYTFLAGDSTVDAPDYLAVLNIGFLAIKAQLENKVRNIGSAVSRNSIDEANNCRSAIYACDAAMHFAQALASKAESMAAAESNQYRRAELQESAAILRNVPAKPAQTFKEACQAFYLLQLILHLENGSYAVNPMGFDKAVYPFYQRDIEQGRLTQAQAYEIVESLWLKLAELSEVRSTKLVDGYPMFDALKDGIYLNDPRVCINELSAMMLSAHENISAINNGLKVRLYCGKNSAQPQYAAPNASYVAPTAQAETEFNVMEGLTPRLQRLRNRYLEARPSVSIYRALAFTDVVKNNPGLPPILLRAKAFRRACETAPILIQPEELIVGHPCGKARAGAFSPDIAWRWVVEELDTMSTRPQDPFVISEEDKKVIREEIAPFWEGRSLDEICEAQYREAGVWEFSGETFVSDLSYHQINGGGDTCPGYDVLLFTKGMNGIKADAQAKLAELSMENPDDIDRIYFYKASIETCEGVVAYSHRIAAHARELAVLESDQKRREELLTIAQVNENVPANPPTTLQEALQSIWTVESLFEIEENQTGLSLGRLDQYCFPMYENDIKTGRLTQDQALEMMQAFIIKCAELMWMSSELGAKYFAGYQPFINLTVGGQKRSGGDACNDLTYLIMDAVRFVKVYQPSLACRIHNQSPQKYMEKIVDVVKAGMGFPACHFDDSHIKMMLRKGFDFEDARDYCLMGCVEPQKSGRIYQWTSTGYTQWPIAIEFVLNRGRMVLFDSYQGLDTGDLRDLKTFEDFDNAVKAQIAHIVRLSAIGTVISQRVHRDVAPKPLMSLLVEGCMEKGKDVAAGGAMINHGPGLIFSGLATYVDSIVAIRKLVYEDGRYTLEQIRDGLLANFEGYDELRRDCLNAPKFGNDDDYVDQYALDITEWTERECRKYDMLYSTLSHGTLSISNNTPIGELTAASANGRLAWMPLSDGISPTQGADKQGPTAIIKSISKMNVETMNIGMVHNFKFLKGLLDTPEGRHGLITLLRTASILGNGQMQFSYVDNEMLKKAQQEPEKYRDLIVRVAGYSAYFVELCKEVQDEIISRTVIEKF

>EGJ46_01720_UniProt_A0A3R8W2E3
MNQFLIKPKVQFGANALDFISQMSAHHAFIVTDKAMVKFGLADEVTRRLTQSGIAFSIYDDVEPDPDISAIVKGMKIMDRQYPDVVIALGGGSVIDAAKAVIYSLWHTKKDVNRVKPQFIAIPTTSGTGSEVTSFSVIKSQSEKLVLVDEFMLPDVAILDPALVKSVPASITADTGMDVLCHALEAYVSRTASDFSDALAEKAVQLVFGHLIDCYRDGSNLVAREKMHNASCIAGMAFTNASLGITHSLAHALGGVFHIPHGRANALLMAQVVAFNADLEGRCDNEAAKRYAHLAKNLNLPASTIREGVESLIMAINVLKDEMNMPKGIQATGTNEFDFNARLGEMVGQALRDSCTPTNPRDVSKVQLEVLYRQSF

>EGJ46_01725_UniProt_A0A1B8SU87
MILAKVVGHVVATQKCQELSGSNLLMVTKLGDDLEPLKNKTYVAVDSVGAGINDIVLAEAYFALNKDNYKAMSVVAIVEKVYTKE

>EGJ46_01730_UniProt_A0A3R8X019
MVALDKDLQSRQLARELVRNAKQAQKEFATFSQEKIDNIVKHIAIESALHAEELAKMANEETGFGKWQDKVLKNTFASMRVYEHIKDLKTVGIINDDKINKVMDVGVPLGVITALVPSTNPTSTIIYKTLIALKAGNAIVFSPHPNAKACSFRTLEIVKKAALEAGAPAGIVDAVTMLTLEATKELMHSKDVSLILATGGEGMVRAAYASGTPTISGGPGNGPAFIERSANIKQAVSDIITSKTFDNGVICASEQSIIVERCIYNEVHRELLAQGAYFMNEDEAKRMASMLLRANGTINPEVVGKDAITLSQRAGFTVPANTRVLIALQDTVSPKNPYSREKLCPILGMYIEEDWQSACHRVVDLLTNEGLGHTLVIHTQNEDVIRQFSLEKPVNRILINTPAALGGIGATTNITPALTLGCGAVGGGSSSDNVGPMNLLNIRKVGYGVRSIDDLRQPAQPCTVAQAPATVNQPQVSIFDDSRFRNPVAATASPVTANPAGDDRFGSAVTTAAIAEAVVSQGDITEENVEQIIKAVLGRLSK

>EGJ46_01735_UniProt_A0A1B8SU97
MKEALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVKGDVGAVNAAVESGVEAAKRIGTVVTSRVIARPHNDIGKIAQQHKA

>EGJ46_01740_UniProt_A0A264VV43
MGDALGLIETQGLVACIEAADSMCKAANVVLIGYENVGSGLVTAMVKGDVGAVKAAVDSGVESASRIGTVVTSLVIARPHSDIQKIVAQYKVTE

>EGJ46_01745_UniProt_A0A2A5Q424
MGDALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVKGDVGAVKAAVDSGVESAQRVGEVVTSLVIARPHNDINKIVIKHKA

>EGJ46_01750_UniProt_A0A3R8XHA6
MKISGKVLCLLSFLLFIVVAIYTQSVLFSNKQDGLMVCSTKGIMRFENMKDENVNGNIHFNFGANGKGSIVVEGYTDSKAGWLYLQRYVKFNYTTKRISPTERHYSISQWEASASSIDESPNVIFDYFMREMSDSHDGLFLNAQKLNDKALLLSSINSPLYICTLKPGSKFD

>EGJ46_01755_UniProt_A0A3R8XVJ3
MKYKINAFILYDAVDGTLSLKEDEVDTQLSITANALLFYFIQHRGVVSRDEVLKAVWDDNGLVSSNSNLNQYLSILRKAFRPYGIENIIVTVARGRLEFNSDVSLELIDDIKTQPTELITSLSEIEETAVVLSPTSQPISDPTDPQKIDSTLTPEKKEICWYLASGAFLLCSILLAVMAYLSNQPSVPINMTVLEHTHCDVLSNEKMINNTVALNYVQNFDKVRNNLNLECVEKERFVFFYGDKLQTNGLGRVFLAHCAVNEDNPFSYCDNYFYYSWKPS

>EGJ46_01760_UniProt_A0A427HQA1
MNKSAQHRKKDPIKLQVELLKAARIIAGREGISSLSLNAVAREAGVSKGGLMHHFPSKQELIHALFLQLLEIMDERIHTIMGNDSNPYGRFSRAYLHYIGELKESDESFQLALLSLAMPTEPVLRQCWRDWVSNHLAKGDEFDNSYLGALVRYAADGLWLSSLTEGETLSQQERDAIVSRLTTISFEKIL

>EGJ46_01765_UniProt_A0A427HPR1
MSNQYNIGVIVGSLRADSYNLVVAKAITKLFPANFTFKFIDIGELPLYNQDADQNVPSVVANFKSQIKACDGIIFATPEYNRSVPGVLKNAIDQGSRPWGDNSWDGIPAGVLGVSIGNISTAIAQQHLRNSLAFLNMPTMNQPECYLKWYEGMVDEQGNISPKSKDFLQPWADTFAKFVAHNAASK

>EGJ46_01770_UniProt_A0A427HPN9
MAEPIYLTLTGKNQGLISAGCSTIDSIGNRHQIGHEDEIQVISLNSGSFRAQNAAYQPVVFTKLIDKSSPLLSTSLDSNEVLEAVFVFYRTSQHGQLEKYYEVKLSGVSLIEVSDIFPDSIKSSELIPHQYIQMKYTSISRRHVMANTSSYSINSDMVK

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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