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BMC type: GRM2


Organism: Photobacterium ganghwense. Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

         ABT57_24085 (fasta)
             ABT57_24090 (fasta)
                 ABT57_24095 (fasta)
                   ABT57_24100 (fasta)
                      ABT57_24105 (fasta)
                            ABT57_24110 (fasta) HMM02441_04 GRM2 (HMM details)
                                 ABT57_24115 (fasta) HMMptac_3_eut2 GRM2 (HMM details)
                                         ABT57_24125 (fasta) HMMgreae_1_grms GRM2 (HMM details)
                                                                       ABT57_24130 (fasta) HMMgre_1_grms GRM2 (HMM details)
                                                                                 ABT57_24135 (fasta) HMM00465alcdh_3_mix GRM2 (HMM details)
                                                                                   ABT57_24140 (fasta) P_clearBlue GRM2 (HMM details)
                                                                                     ABT57_24150 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                                                       ABT57_24155 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                                                         ABT57_24160 (fasta) H_brightSkyBlue GRM2 (HMM details)
                                                                                             ABT57_24165 (fasta)
                                                                                                    ABT57_24170 (fasta) HMMreg00486_2_GRM2 GRM2 (HMM details)
                                                                                                        ABT57_24175 (fasta)
                                                                                                                  ABT57_24180 (fasta)
                                                                                                                         ABT57_24185 (fasta) HMMreg00072_4_pdu1d PDU1D (HMM details)
                                                                                                                                  ABT57_24190 (fasta)
                                                                                                                                          ABT57_24200 (fasta) HMMreg00072_2_pdugrm CsomeBCy (HMM details)
                                                                                                                                              ABT57_24205 (fasta)
                                                                                                                                                            ABT57_24210 (fasta)
                                                                                                                                                                 ABT57_24215 (fasta) HMMreg00072_2_pdugrm EUT2E (HMM details)

BMC shell protein types:

BMC-H(map on tree)

      3x H_brightSkyBlue

BMC-P(map on tree)

       P_clearBlue

(complete list of loci)

Protein sequences:

>ABT57_24085_UniProt_A0A0J1GXC7
MHRTDLSSWQHRHDFAENNILGEKRTFWVFLLTLVTMIAEILAGTFYGSMALLADGWHMGTHAAAFLITLFAYRYARKHADNPVFSFGTGKVSVLGGFSSAIALGIVALIMLVESTHRLFSPAQIHFNEAILVAVIGLIVNVVCAFLLHDADHPHGHTHSHHHHLEHGHEHEDHNLRAAYFHVLADALTSVLAIIALVLGKYLGLNWLDSVMGIVGALIISRWAFGLIKQTSPILLDNSIDPHYQQRMIDTLEAADDNQVCDLHIWKVSADHYAAVISLVTQHPKPAQEYKQLLTEFDKISHLTIEVNQCREPH

>ABT57_24090_UniProt_A0A0J1GY13
MKDIEQLNHTIIEFYEKLSSWEQSVVRGKGFSLPQVHVVEILGVHGAMRMKELADKLGVTTGTLTVQVDKMVKMGLIERRPHESDRRSILVVLTAEGEALYQEHDQLHLSLTQDLTAKLSDTDRQHLLACLTAINKEF

>ABT57_24095_UniProt_A0A0J1GXE3
MNTLLTVTLAGEDHPQLINTLAAKTHELGGKWLVSKINRLDNQVVGILKIDLPTEAVPALKQAFASQSTLDVRVIEALTAQAQIKTDHVMMKVESADRPGLVHDLTHILDNIGIGIVKMENHRIGVQDIGKTLFFAELHLDVPVDIDTEQLVEALQQVEEGMRVSILENA

>ABT57_24100_UniProt_A0A0J1GXF4
MLNAGVLWLALSICSEITGTSFIKKTNNFRKLAPSLLVISAYSICYFALTKAMGYIPVGIAYSLWCGFGIIGVTIFSMVLYKQKPDFPAIISMGLIITGAVIMNMFSQM

>ABT57_24105_UniProt_A0A0J1JQ15
MSESIKKWLWMVLVIASETSATSTLKMFDTSEGFTKTALLAVIVLLYIVCYYALSQAVKYLPVGLAYATWSGTGILLVSTLGMLFYGQHPDMAAMIGMTIIASGIIIMNLFSKMGEEEAEDTQRVVADKEGEAQC

>ABT57_24110_UniProt_A0A0J1GXD0
MDEQQLRVLVDRILAEQRARTLMIVTPATGYRSEIAARLRQWESIRWEILACEGTEEELVVLDGIGQPVQWDGKLPTEWLDRFDQIVMPFLDFATLAEISLGVYHSPASQLCQYALMKGIPVFAFDYQCNPASELNQLVGLDRSQAMAARVVSQLAQVRALGMITGTLSQVEAAINGKDVAESESSELSKPSGYITLSDVKKRGVGTFTLQDNLTDLAAEYLREQQQS

>ABT57_24115_UniProt_A0A0J1GY16
MINAALMTQIEQRLTVLPQRWSAGQIATEVGIPTGVSNRHVHLSQTDIEALFGLGYQLTPLKSLRQPGQFAAKECVMVVGPKGSISKVRVLGPARAETQLEVSKADCYALGIKAPVRESGDLYQSADALLVGPAGYANLQSKVICAQRHIHMSPQDARQLGVQHGQKVKVRAGEQCGLVFEQVVVRVNERFALEFHIDTDEANAAGIRSGDPVYLVG

>ABT57_24125_UniProt_A0A0J1GXF1
MTGTAQVSNGSELKGRIFNIQKYSIYDGDGIRTLIFFKGCNLRCDWCANPEGLSSKFQVMCSHDKCVSCGKCADVCPAGVHVMTTDAEGNKVHKIDRNVDCIGCRQCEDVCIGGALDVMGKDVTVAELMAVIMQDYDFYMSSGGGVTLGGGELSLQTDFAAALLTECKKQMINTAIETQGTTSIDNYEKLATCTDLFLFDIKQIYTDQHRQLFGIGNEGVKRNLERLVELGANIVIRMPLIRGYNDSYDAITGAFEYVMELAKRGNIQRIDVLPYHQFGKTKYDKLDMIYPITQDIGYSNEELDQLSTFFKQFDFDIRLVRH

>ABT57_24130_UniProt_A0A0J1GXF8
MAHYTLTPRVKVLAEQLLAKNSIICAERANILAAIGDDIAGMPPLVKKAQRFNQLVSELPIYIGQDELIVGSQSSALRGAIFHTEEELSSESVFGFLSSDATGTPDYMTVISTGFQVLEQHMETRLKNIGSAISRSGMDEVNQGRAMIMACQGAIYFANKLADTLATKASVESHPYRKAELEESAAMLRHIPAQPARTFKEACQAFYLIQLLMHLDNGGYAIGSTGFDKALFGYYQRDINAGLITPAQAYELVECLWLKLAELSEVRADRAVDGYPMFDWLVQGGQNGDSQMVQNELSAMLLAARDNLAALNRSLTVRLYQGGAKPAEVTLCNGNVLPVDESTPAMEGLTPRMQRLRSNYLKAKPSVSIYRAIAFTEVTKQNLGLPPILLRAKAFRKACETAPLLIQDDELIVGHPCGKPRAGAFSPDIAWRWVRDELDTMSTRPQDPFLISEEDKKVIREELVPFWEGRSLDEICEAQYREAGLWEFSGETYVSDLSYHQINGGGDTCPGYDILLFTKGMNGIKADAEAKLAALSMENPDDIDKIYYYKASIETCEGVMAYGRRLAAHARELAAKEMNPQRRAELLTIADVNENVPANPPKTLQEALQSIWTVESLFEVEENQTGLSLGRLDQYCYPMFRADIDSGRLTHEQALEMMQAFIIKCAELMWMSSELGAKYFAGYQPFINLTVGGQKRTGGDATNDLTLLIMDAVRFVKVYQPSLACRIHNQSPQHYMEKIVDVVKAGMGFPACHFDDSHIKMMLRKGYDFEDARDYCLMGCVEPQKSGRIYQWTSTGYTQWPIAIEFVLNRGRMVLFDSYQGLDTGDLNSLTSFEAFDAAVKEQVAYIIKLSAIGTVISQRVHRDVAPKPLMSLLVEGCMEQGKDVSAGGAVVNYGPGLIFSGLATYVDSMAAIRKLVFEDKKYTLEQMRDAMLANFDGYEELRRDCLNAPKFGNDDNYADEFALDITEWTERECGKYQMLYSRLSHGTLSISNNTPIGELTNATPNGRLAWMPLSDGISPTQGADKHGPTAIIKSVSKMNVETMNIGMVHNFKFLKGLLDTPEGKNGLITLLRTASILGNGQMQFSYVDNEVLKKAQKEPEKYRDLIVRVAGYSAYFVELCKEVQDEIISRTVLEKF

>ABT57_24135_UniProt_A0A0J1JQ20
MNTFQIKPTLHFGAGALERLTALSHQRTLIITDQAMVTFGLVEQVRRYLSGTPEMISLFAEVTPDPDVAVISAGMKAYKAAAPDLLIAIGGGSVIDAAKGVLYTLHQAGELAEKPKFVAIPTTSGTGSEVTAFSVIKSGTEKWALVDGFMLPDLAILAPELVASVPAAITADTGMDVLCHALEAYVSNQASDFSDALAEKTVQLVFAHLPDCHRNGQDLVAREKMHNASCIAGMAFTNASLGITHSLAHALGGGFRVPHGRANALLMSQVVAFNADYHGQCNNAAACKYARLAKLLGLPASDTREGVMSLLVAIDVLREQLDIPASIAATGVERPAFEAALPALVAQALKDNCTPTNPRKASALDIEQLYQQSFRSAATQ

>ABT57_24140_UniProt_A0A0J1GXD5
MILATVTGHVVATQKCDQLRGSNLLLVTALGDDLKPIKDRTYVAVDSVGAGVADQVLVEDYFALYKEQYKAMSIVAIVEKIHKGC

>ABT57_24150_UniProt_A0A0J1GY18
MKEALGLIETKGLVPSIEAADAMCKAANITLIGYENVGSGLVTVMVRGDVGAVNAAVESGIEAARKIGTVVSSRIIARPHNDIEKIASKHKA

>ABT57_24155_UniProt_A0A0J1GXF9
MNDALGLIETKGLVACIEAADAMCKAANVELIGYENVGSGLVTAMVRGDVGAVKAAVDSGVESAQRVGEVVTSLVIARPHSDIEKIVSQYTVTE

>ABT57_24160_UniProt_A0A0J1GXG1
MGDALGLIETKGLVACVEAADAMCKAANVELIGYENVGSGLVTAMVKGDVGAVKAAVDSGVESARRVGEVVTSLVIARPHNDIDKIVIKHKA

>ABT57_24165_UniProt_A0A0J1JQ24
MTSNKSGRIFFFYALILFLLCTLPFLSKVIPENSGEMRCSARAIMHFEDTQTETLNVNVHFRFARDGEGSMVVEGYSDSKAGWLYLQRYVTFNYFSQRVSDLERVYQVQSWNATKSSIDESPDVLFDYFMREMSDSHDALQIKVQQLNYETVLLSSLNSPLFVCVLEH

>ABT57_24170_UniProt_A0A0J1GXE1
MKYKINDFLFYDVTDATLSLNDSGVSDTQLSITANALLYFLIQHPGIITRDEVMKKVWDDNGLTSSNGNLNQYLSMLRKAFRFYDIDNIVVSVPRGRIEINPDLVIEIVDDCQLHPLIQQEEEDGTATEQPVSPLLSPSPKKQPLFGEDLPPQTEEQEKNWLMASAVLFTGALVLLWTAIISERSINILQLNQVQNSVCELFSTEKMINDEMQQSYNHSFTAVTNALGIECNKERRFVFYYGDKFQNKGLGRTFLAQCAKNENNPYAYCDNYFYYSWK

>ABT57_24175_UniProt_A0A0J1GY23
MSDVPVSVAKAAEVIQPVAESSGSIWGYVAGGVALLILAGFFGYKKINKPAFIINQVRKRNLKEIQKLGIENSDFVNDLDKLLVSVQSYAEEQGRTGGDVVKLLSPLNDKERIKTARDMYQSMIYIANDIQDASLAREFKNKAKQVKASSPLMAGLLKRAGI

>ABT57_24180_UniProt_A0A0J1GXH2
MALVMALMMFPQIVETIYSPALTGIAAGFGITAAEAAQTLSLYFLAFALGVVIWGWLSDRIGRRPAMLAGLTLYAVASVWAVFLTSFPLLLAARCLTALGAATGSIVTQTMMRDRYTGRQLARVFSILGMAIAVSPALGVMSGALLTSQWGYRGVFIGLAVLASMLLAWSVLRLPETRPDGYHKAAFKSVFFTMLSDTRLWGNAVLVAVFNVCLFSFYQLAPFMFARLGMETEIFGLAGIVLSLGVGAGAWLNKWLLARHWPEKRILHLSVGFLVVGGVTVHVLDGHISFVAPVVLVVAAYGMAIPNVLAGALVKYRACQGSAGAIFGLFYYLLLAGGLMLAGWSQHFSAVVVTCGLVAFGVLQIESRLQNDAQPETDLP

>ABT57_24185_UniProt_A0A0J1GXH0
MAWLNKDDTFDPDSFHNKVLGIAAELGVHDSGVHHHAMGQLLFTHWGCIRITLAEAICLLPPTRIAWIPPELPHRAEVTGAVGYRSVYLDTAAIPDLPETVEVLEASPLLQAVLERIAMADFSTQWEQGPPANLLAVCLDELHQARSEPTVLPLPRDPRLRHLASQASHTLPPSLKLLADHTGASEKTISRIMRRETGMSYQQWRQQWRLIKAIEMLAEQNSLTTIAAALDFSSDSAFSTFFKSMTGLPPREYMADSGSRTAQR

>ABT57_24190_UniProt_A0A0J1GXG3
MEFRPGIFSFSVIAVALLISCLSDYLAASTAVVLLILQLGVVLVAMRVNRRWACLGAICSALSFNYFFTAPRYSFQMFHLEDVVNLGVFLLVALIISQLASHFCQTNPARSHRHRYPLLSAQVSSDLQTSLAAVNRALEKIHRDSSGLNRRQAGLLHQAITESWRLQRHLQTLGLAHQLALAVRGNTHVQEKNVSSVAMVPLLHRVMAQFPGCCQRLVINADTELPAVQGDPALLELAVANVMDTLLAAVADNTALCISLSAEFHPAESALGLPEMLTAEFQGPFSHHAFDEDPDFPASGLAIARAIIRDCQGCFELFPAQPDKEKEQDTVLRVWLPISKSPCLSVR

>ABT57_24200_UniProt_A0A0J1JQ29
MRLDDKPTLLVVDDEPANLQVLKNILAGTYRLLFAKDGQRALALAATEEPDLILLDVMMPDQSGYDVCRELKLKESTRHIPVIFVTALTGENEEALGFELGAVDYIPKPVRPAIVRARVKTHLSLVRVDELKSTRLSIVQRLGRAAEYRDNETGLHVIRMSRYAQILALAAGFSEHQAEEILHAAPMHDIGKIGIPDAILQKPGKLTPDEWQVMQRHTEIGAEIIGTPDSSLMRIAKDIALYHHERWDGSGYPTGLTGNAIPVAARIVAIADVFDALTSERPYKSAWPVEQATQLIREESGKHFDPNLVEVFFQCLPKLLEVKEQWREPEFA

>ABT57_24205_UniProt_A0A0J1GXF2
MNKEYRESSFYRAIHHQAKSVGIENIFHQIKDRSGKKLSARTFSNKLNPSQEAHQLTVQELMLMLEVLQEDEKHVYILEEMLRVFGMKCKRHNSEESYDITYRNVLHAWMDWDKERGDVQQEIRDALVDGKVSANELEEIKKEMDQDISAMTNLRDMLEFACSQNLTIK

>ABT57_24210_UniProt_A0A0J1GY34
MKLKGILLCVATLSMAGCGGGGGGGDGTDTDHKASSSVTRLSSPYLPAEQGAVWRYTVKDSGENLSLSSSAIKQANGKETVDLTWDHSGYRQTLRYQGNTLSIEHLHFDKVTVNNTDYKVDMDLSTAPALLLPEFSVITPEGGINSRQQMQVTISPDAGSTYGEYSLSWSYKGIETIETPAGRYEALHVQYSLNLDVFVALPDDAYQSDSPQGDGTFRTQVPVLQDLWFSPGIGIVKISDSSARIYSPVVAELADFNRYRDNVGNLTNMPDSTAIPADSPWKNIRQAYKLDQLYGNWESAYHCNPAETQSPSFQLSLTETNYTLTTRLTDNENCSGDYWNDYVESGTYILRGFDPQDAGFLLLDLIPSSSTRQEYRFGHLLYETPDWGQTRFISLAPMADKTARLGIDEIPNLPNLATRLYAELTAVEKEPKDTETLNSTALVYFQIEDENYQMLPEEAHAGWGMQVWNDATCDAIMDSQLSTISWEQPLQPAGFDPLLGLYFELQIKENNTGCANVIFHKGEEKSVEQNQTIDLNARYFYQAKYGAQGITSN

>ABT57_24215_UniProt_A0A0J1JQ45
MLRIALASEGYDVTEAENGEQGLAAVVRQQPDLVVLDLGLPDMDGHQVLQELRSWSSVPVIVLSVRNQDREKVQALDTGAQDYVTKPFSVMELLARVRVCLRDHIKPEQMPVLDDGKLKIDLMKRQVSVNCASVDLTPKEYAVLAMLASSPNCVITQTQLLKEIWGPSHTADTHYLRIVISHLRQKLADDPTEPTYVRTESGVGYRLCIES

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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