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BMC type: EUT2D


Organism: Desulfosporosinus sp. SbF1. Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

   SBF1_1270001 (fasta)
          SBF1_1270002 (fasta) HMMreg07568_1_eut2 EUT2D (HMM details)
                 SBF1_1270003 (fasta) HMMreg07568_1_eut2 EUT2D (HMM details)
                       SBF1_1270004 (fasta) HMMreg00072_1_eut2 EUT2D (HMM details)
                                         SBF1_1270005 (fasta)
                                                         SBF1_1270006 (fasta) HMM13520tp_1_pdu EUT2C (HMM details)
                                                          SBF1_1270007 (fasta)
                                                                        SBF1_1270008 (fasta) HMM06277EutA_1_eut EUT2D (HMM details)
                                                                                      SBF1_1270009 (fasta) HMMetlyEutB_2_EUT2 EUT2D (HMM details)
                                                                                               SBF1_1270010 (fasta) HMMetlyEutC_3_eut2 EUT2D (HMM details)
                                                                                                  SBF1_1270011 (fasta) H_fuchsia EUT2D (HMM details)
                                                                                                        SBF1_1270012 (fasta) Tsp_cerise EUT2D (HMM details)
                                                                                                                       SBF1_1270013 (fasta) HMMalddh_2_egra EUT2D (HMM details)
                                                                                                                          SBF1_1270014 (fasta) H_fuchsia EUT2D (HMM details)
                                                                                                                                       SBF1_1270015 (fasta) HMMptac_3_eut2 EUT2D (HMM details)
                                                                                                                                               SBF1_1270016 (fasta) HMM02441_09 EUT2D (HMM details)
                                                                                                                                                  SBF1_1270017 (fasta) P_azul EUT2D (HMM details)
                                                                                                                                                               SBF1_1270018 (fasta) HMMPduS_1_all EUT2D (HMM details)
                                                                                                                                                                    SBF1_1270019 (fasta) Ts_dodgerBlue EUT2D (HMM details)

BMC shell protein types:

BMC-H(map on tree)

      2x H_fuchsia

BMC-P(map on tree)

       P_azul

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

       Tsp_cerise

(complete list of loci)

Protein sequences:

>SBF1_1270001_UniProt_A0A2U3K2V4
MKSREIGITGGQIDTMPTVAYLLGINEESYKNTVFGRNLLNTNKNFAVLANRQYVGEATNNQEQQEEIKGIDLADIIIRKNYFKEQGYK

>SBF1_1270002_UniProt_A0A2U3K2S5
MDCETIKGLCLEYTNLVESDIELLEAMALQIPYTAEMTGTDIFIDAQLKDGLDAVVVAWACPKNRSLYGHSVVGELAYATSEPAVYRTFKTGGTSRNVRGVSQEGVPIAQTVVAIRNANDNVIGTLIMERDISEELRQEEHMEFLTQTAERLSSTLMYLSTTGSQFENWVGNGIFVLNNYNKITYVXLIFMGLRQRGMISPFLYLIVLR

>SBF1_1270003_UniProt_A0A2U3K2U5
MVTCGELSGCVVSFRDITDLRKKEQELNAQSTVIREIHHRVKNNLQNVAALLRLQMRRSDLEAVKAEFMASINRIISIAMVHDVFTYQTRDSIDLRELSQRILNGLIDSSVLPEHSIETRVEGQHLLLPSLQAVPLALVINELLTNSFKHGIQFLENGLITIEILEAKGQIQLSVSDNGLEPLAPFDTEQQRRLGLQIVDSLVGEQLGGKFRMERIEGMTCVTVCFPKHNLEEQV

>SBF1_1270004_UniProt_A0A2U3K2U9
MSSLSILIVDDEALTRLDIKEMLQGVGHIVCGEANSGAKAVELAKSLAPDLAILDVMMPGLDGLETAKILHSLNIPVLMLTAYSQPKFINRAEKVNVYGYLVKPITERDLLPAIQIAYARWREMQDVRLKLENTQHELHSQKLIARARAILAAREGINDYEAHQLLIHQAMDLRITVVKLAGQLVHEVSKEL

>SBF1_1270005_UniProt_A0A2U3K331
MKVIFRLNKTSLVFSGVMVSLGFIFRNSSFAFLLLLISIGGFMTIFLLHISKTFELLEYSIEYLKRGSLGDYMVLEKGVKLVEQLNNEIISILQSNKFDREMVIQIQKRLLIENNEFLALSSFWEPNAFDGQDSSFLNVDYYDKGTFTAYVYRDEDEGLKVISLSDVYNQPWYSIPKKTRKITITEPYLETIKGEKILIASIVLPIIFKGKFLGVIPTDFVLNEINEIQTDVVLYKNSSNNLSIERIVERLINRKDEFGILGQAIKATNVNQKQILNRLLQTTNQVTKTSQELTVISQESTKAVEEIAKTIEQIANSATTQALETENGVSEIRELGNIIEQDQHYLIDLNNSARTVEKMKDEGTISITELIARTSERERYAKRIQEGILKTNVSADKIIYASQMIQNVADQTNLLALNAAIEAARAGEAGRGFAVVADEIRKLAEQSSNLTQEIEAVVQELQLNSQNAVEIIEKSSVIAKKQEDSVNITYERFKKIAEAIAKSKEIIEDMNISGLSLEKKKDQLIDILKKLDHIAEENAASTEQVSAATEEQTASMIEIANASQGLSTLAYELQQTIDKFNV

>SBF1_1270006_UniProt_A0A2U3K2Y8
MTKKMSLKEIMERDTKRLHELGYKQELERSMSGFTNFAISFTIISVLAGTLTLFGFGLNVAGPSAMAYGWPIVSFFAIIVAAAMAEISSAYPTAGGLYYWACKLGGSGWGWFTAWFNLIGQIAVTAGIDYGLAMFVDALLNQYIPAIPADGQAGSIATLVIFALILMLQAYINARGIHLVSSLNNISAWWHIGGVILIVGALLFFAPHHANPIDFMYHTQFTASGFPYWYGFLLGLLVASYTFTGFDASAHVSEETAGAEISAPRGILMSVVVSAIAGYLLIIGLLVAMPELKDTLASTNPVLFILNTRLGGTVGTLMFLIAIVAQFFCGTASVTSNSRMIFAFARDGGMPGSKLWYKINERHVPLNALYLSIISAFILALPALFSTVVYSAVTSIAVIGLYIAYVIPVFLRNIHKDRFEVGPWNLGSWSSLIGWIAIIWTVFASVLFILPVSFPITVSNFNFTGVVLLIVWALLIPWYLISVRHWFKGPKSAFDDAEDLDAKDLKIKQSLSKKNIHT

>SBF1_1270007_UniProt_A0A2U3K302
MLFESKDEIATQGVNRERSLRMTYRNDSITLEMVGTKGMVEVVNAIADVEVIK

>SBF1_1270008_UniProt_A0A2U3K377
MTKEMILVSVGIDVGTTTTQLVISQLTLVNVMPGSQVPKVEISNKSIMYMGNVHFTPFEDRQHVDGRALRAIIAKEYERAGVKPEQIDTGAIIITGEAAKKENASEIIHSLADYAGDFVVATAGPDLESVIAGKGSGAEALSKRLHARIANIDIGGGTTNIAYYERGKCIGTACINVGGRLFEVDPLTHNLNYISSPGQTIMNHCYPNESLAQSGDEVLMIRRCLRAMVECVERVIFHEPLLAQDRLLVMTNKLPNVLLDGVVFSGGAAKYIYLPGIMEWWIHGDVGPLLAEAFRESRIYSSFSVHQGAETIHATVLGAGAHTVNVSGSTITISKNTLPLRNIPAVYPEEGPKGTFSWLKSAENYTSSLRRTVALVVPPLPNTDFITICTLAETLACELPLIKGEPKVIIAQQDIAKVLGQTLQRLLPSVPLVCLDGIELALGDFLDIAKPLAHEDAVPVIVKTLVFTN

>SBF1_1270009_UniProt_A0A2U3K2V0
MNLKTRLFGQTFVFKNIKEVLSKANEIKSGDILAGIAAQDAAERIAAKRVLSELTLEDLRLNPVVPLENDEVSRIIDADVNEPIYHTLKNWSVAEFREYVLKTDTTGSNLRRISRGLTSEMVAGVAKLMSNLDLILGAAKIQNLAYCNTTIGQKGCLASRLQPNHPTDGVDGILASVREGLSYGIGDAVIGLNPVDDSMSATIRSLETLYQFVEEWKIPTQICVLAHVSTQIKALRKGAPVHLLFQSIAGSQAGNETFGVSKDILDEAYALGLKEGRATGPNILYFETGQGSELSSEAHHGADQVTLEARCYGLARHYNPFLVNSVVGFIGPEYLYDTRQVTRAGLEDHFMGKLTGLPMGVDACYTNHMKVDQNDIENLATLLAAAGCTYFMGIPMGDDIMLNYQSTSFHDIATLRELFNLQPLPEFEVWAEGMGILAQGKLTAQAGDATIFTR

>SBF1_1270010_UniProt_A0A2U3K2V2
MSLEDNVRLIVEQMLKEMGKGKSQLSVSSLAQAVAPILAECQIADLAEIDLQSYLQVPSPTNQALYEEMKLSTSARIGVWRCGPRPLTDTLLRFRADHAVAQDSILGEVPEDFPSQYGMVSVRTFCQSKDEYLTRPDLGRKLDAENLEILRNGCQKGATVQIIVSDGLSSKAVVANIPNLLPALIQGLEGMGVKLGTTIFVRGGRVAVMDTIGEELKPEVAVILIGERPGLGTAESMSAYLGYNPRRGMVESERSVISNIHKAGTPAAEAGAHLASLIKKILDLKASGVNLE

>SBF1_1270011_UniProt_A0A2U3K2W5
MAIRDDMVALGMVETRGIVGAIEAADAMVKAANVTLIGKVKVGGALVTVMVRGDVGAVKAAVDAGASAAERVGDLVSCHVIPRPHPELEEILPKLPFFEEKPKTKNGENTK

>SBF1_1270012_UniProt_A0A2U3K2T7
MIEPIKPKVLAVRLIANVAPDLAEKLGLTSYQRSIGMITADIDDSTYVALDEATKKAEVEVVYAKSFYCGAARASGPLSGEIIGILAGPNPAEVRAGVDACIEHLENDCFFYTCDGGKTAWFPHTISRTGSYLSKIAGIEEGQPLAYLIAPPIEAIYGMDAALKAAEVTMKAFYGPPTETNFGGGLLTGSQSACKSACEAFQRAVMDVVENGLKF

>SBF1_1270013_UniProt_A0A2U3K2V5
MVMELDRDLCSLQETRNLVRAARKAQDVLMNFTQEQVDQIIDMMREAGEANAAKLAMMAVSETGMGNYNDKCFKNYFASRTVYESIKDMKTVGIIREDKQQKIWEIAEPVGVIAGIIPTTNPTSTVIFKAMIALKSRNAIVFSPHPSAVRCTNEAAKIMHQAAVAAGAPEGVIGCILNVSMGATTELMKHPSVALILATGGSALVKAAYSSGKPALGVGPGNVPAFVERSADLPTAAEYIVMGKTFDNGTICASEQAVVAEECIADELTTHLQRYGAYFLDSEEVQKVSKVVMLPNGGVNPKVVGKEPKFIAQLAGISIPDQTKCLVAPLAGVGPQWPLSYEKLTTVLGFYRVADWHVGCERCLQLLEAGGIGHSLAIHCNNEAIIREFALKKPINRLLVNTPAAMGGVGATTGLSPSFTLGCGTWAGSSVSENVTPLHLINIKRVAWHQRIPERKPVEPMKVEGMTPAASNPTAPTAQSDAQLVQEIVDQVMKHLNSIKC

>SBF1_1270014_UniProt_A0A2U3K2W0
MAQERSVIALGMIETKGLIPAIEAADQMLKAANVTLCGKEHVSGGLVSVMVRGDVGAVKAAVDAGAAAAQRVGELLSVHVIPRPHKDVEYILPVGDNKSFGE

>SBF1_1270015_UniProt_A0A2U3K340
MIVTEFELRANWHKTKDQVIKLPHGSVITPSARDFIRSKGIDVQIEGNVRQKPFSEKLNALKKDQGVQEVKLEHMTHLRSGVLVTKTHPVIAYRGQLDLFQCELVEVQGFFAQEGEEKLILKLEEILAFARQLMASEVKEEPFQWATLIGLKPEELREQSHNPLKYFGVEHAPLSYTHGKVVSKLHHLRAKSREVELYANRAFINEVGVCSRTDLIQALNRLSSALYILACEVQGKVQMGKRVPIGTSNRHLHLSKDDLFVLFGENYALTIQKELSQPGQFAAQEMVTMVGPKGCLERVRVLGPLRKNTQVEISVTDCHKLGIKPVIRDSGQPDGTSSLQIVGPSGNVELESGVMVARRHIHLHTDEADEWSLKDGDRVRVQVQSERPMVFEDVLIRVSEHYRKEMHLDLDEANAAFIDAKSQGLLMEV

>SBF1_1270016_UniProt_A0A2U3K2Z8
MNEELINQIVRRILSEPDFQRLMPGTNESTMAVKPDGLVILNFVPDLEQTLKAVKLRWGAEYTLHILPSTSVSATKPGIPEGMNWITPQDALSKGDWQKIMIPACSPNTLAKAALGIRDNPLCEIIGRGITRGIPLVLVTERLGFTLQTPPTYRELYEGYLKDLQSYGVLIYPTLEDERGMIKDQDTDRAPSVGKRRMAGEETGVSMDGPAQEGIRYEKKYLADKDAYGFPEESIVIVKRLTVISPLARDTLKMRRIDLRQEMEGRL

>SBF1_1270017_UniProt_A0A2U3K309
MILARVIGNVWSTRKDESLRGLKFLVVQPLTLSYDADGSVRLTEFGNSLIAADQIGAGESEIVMVASGSSARQGLAKNNIPIDAIIVGIIDRETFEM

>SBF1_1270018_UniProt_A0A2U3K387
MKEISMKVREAGVVGAGGAGFPTHVKLSAQVEIVVVNGAECEPLLKTDQQLAARHSELVIKGLKLAMEATGAQKGIIALKAKYKTALTALEPYLTDKIRIAILPDIYPAGDEVIMIWLTTGRRVPPGGIPLNIGVVVNNVQTIINVARAVDGEPVTVRTLTVTGAVKNPTTVTVPIGTSLQEVMKLAGGGRDEDLSYIVGGPVMGMLLTDLSLPVTKVTGGLIALPTDHLLIQRKRMSLEQVLRIAKTVCEQCCFCTELCPRHMIGHELSPHLLIRAVNYRNLGNLSKLTSALTCSECGVCEAYACPVGISPLRVNRALKAELRAKDIKYQGELGNLDPMAKHRLIPSARLMDRLGLGSWYQEAPLAIRIFEAEEVKLRLQQHVGAAAVPVVKIGEVVKLGQVVGEIPEGSLGARVHASIDGTVIQITPQMIMVRKGGTEK

>SBF1_1270019_UniProt_A0A2U3K2V9
MIHAIGLVEFTSIAQGIECADIMVKTAEVNILVAKTTCPGKYIVLVSGDVSSVQQSVNAGRELGADTVVDYFVIPNVHPSILPAISGTTSIREIKALGIIETYSVASLIEAADSAVKAGDVEPLLLHLAFGIGGKSYTILTGEVASVKAAVEEGSGLASEKGLLIRQVVIPRPAKQLIESLV

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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