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BMC type: CsomeACy


Organism: Synechococcus sp. (strain WH8102). Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

    SYNW1702 (fasta)
       SYNW1703 (fasta)
                SYNW1704 (fasta)
                 SYNW1705 (fasta)
                        SYNW1706 (fasta)
                             SYNW1707 (fasta)
                              SYNW1708 (fasta)
                                     SYNW1709 (fasta)
                                              SYNW1710 (fasta)
                                                          SYNW1711 (fasta)
                                                             SYNW1712 (fasta) H_greenApple CsomeACy (HMM details)
                                                              SYNW1713 (fasta) P_neonPurple CsomeACy (HMM details)
                                                                SYNW1714 (fasta) P_neonPurple CsomeACy (HMM details)
                                                                           SYNW1715 (fasta) HMMca_2_CsomeACy CsomeACy (HMM details)
                                                                                          SYNW1716 (fasta) HMMcsoS2_1_ACy CsomeACy (HMM details)
                                                                                            SYNW1717 (fasta) HMMrbcS_1_CsomeA CsomeACy (HMM details)
                                                                                                     SYNW1718 (fasta) HMMrbcL_1_Csome CsomeACy (HMM details)
                                                                                                       SYNW1719 (fasta) H_greenApple CsomeACy (HMM details)
                                                                                                          SYNW1720 (fasta)
                                                                                                               SYNW1721 (fasta) Tdp_wintergreen CsomeACy (HMM details)
                                                                                                                  SYNW1722 (fasta)
                                                                                                                          SYNW1723 (fasta)
                                                                                                                                    SYNW1724 (fasta)
                                                                                                                                         SYNW1725 (fasta)
                                                                                                                                               SYNW1726 (fasta) HMMnopfamclust3_1 RMM1 (HMM details)
                                                                                                                                                 SYNW1727 (fasta)
                                                                                                                                                  SYNW1728 (fasta)
                                                                                                                                                     SYNW1729 (fasta)
                                                                                                                                                          SYNW1730 (fasta)
                                                                                                                                                              SYNW1731 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      2x H_greenApple

BMC-P(map on tree)

      2x P_neonPurple

BMC-Tdp(map on tree)

       Tdp_wintergreen

(complete list of loci)

Protein sequences:

>SYNW1702_UniProt_Q7U5K1
MLLLASASPARLRLLELAQIPHRVRVSGVDESSIENHDPALLVQQLALAKATAVSDGIDADISSVLGCDSLLLFEGEVFGKPQDGEEAAARWRRMAGGSGELLTGHALLVRSGENRLACISTRVHFAAITEEEIQAYVTTGEPLHCAGGFALEGRGASLIAGLEGCYSNVIGLSLPWLRSVLRDSKMDQSASG

>SYNW1703_UniProt_Q7U5K0
MGDSAIEHPTELLDQRSHARALRSMRCLPFAAALYRELQQQGLDADSIWNNRSRFGRGPAWPRNGERLEDDLRWLITVGVLRREVDGQGLTSRFRLTPLGRDLLDGHQAELLLPAGWNDRLRQVLRRRWPF

>SYNW1704_UniProt_Q7U5J9
MNRKRPLMVLGTSSGAGKSLMTAALCRVLHRRGEQPLPFKGQNMSNNAWVDADGGEMAYSQAMQAWAAGLEPCCAMNPVLLKPRGDSTSEVIHGGTSVGLARAEHYYRDWFRPGWQAIREGLQTMQQRWPNGRLVLEGAGSPVEVNLQRRDLTNLRLAQYLRANCLLVADIERGGVFAQIVGTLALLRPVERPLIKGILINRFRGRRELFDEGRSWLEQHTGVPVLGVMPWLNDLFPPEDSLDLLERKPNRGPTDLEIAVLKLPSISNFSDLDPLEAEPSLRLRWVHPGDSLGSPDAVLLPGSKQTLRDLETLRSSGLDRQLTAYATNGGSLLAICGGMQLLGQELHDPEQLEGGDGAGPWPGLGLLPLTTEFGGTKALRQREVQALWPGTTPISGFELHHGSTWASDDLQPICNEPGLGWWCATPAGGCIAGTYLHGLLDNGPWRRRWLNQLRERKGLAPLITGLPHHGEHRHQLLERLADAFEQHVDLTPLLQP

>SYNW1705_UniProt_Q7U5J8
MSSITVHWPDGHTSHESIGTDWLQTAADAGVAIPTGCLGGSCGACEIEVNGKVVRACISTVPPSKSGQLTVEFATDPYW

>SYNW1706_UniProt_Q7U5J7
MTQLRLSSLALLTGAISGAGVALFMALIGLITRQLWGDPVVKGLDGQIPLVWSIAICGGIGLVLSQLHRAGDHTLLPELPETIADLRDPDHAPPRDNGRAILGAALAQIGGGSIGPEALMTRLAALLSQRIWRDRDHELKFAAAAGSLGLFGFPLLGGAVVQTHQRRDLIARWIPGALGGLAGFAAFHGIDQASGGSLQRMAYSWPSNLGEDLGTLSSGALAGVVGWGLGWLLLHWRNWLERRQLLAHWRWWPALTGLLLGITMHWLPLVPFAGEEQLRPLLEGAGGTGSFLFIISALVKLVLMGLCLETGWRGGIFFPLFLIACAVGVGLHDLWPGLGSLGSWCGGITGAIYLTVLRSPLVALILGLGLLQGHGATGVVVGVAVAWLITHRSPSGDGPPPAQ

>SYNW1707_UniProt_Q7TTT9
MPSSVDLAANYAESGVAEVLDQLDRELIGLTPVKTRIREIAALLLVDQARQQLELASTAPSLHMSFTGNPGTGKTTVAQRMSQILHRLGYLRKGHVVTATRDDLVGQYVGHTAPKTKEMLKRAQGGVLFIDEAYYLYKPDNERDYGAEAIEILLQEMENRRTEVVVIFAGYKDRMDSFYSSNPGLSSRVAHHLDFPDYSNADLMAIAGLLLNAQQYRFSAEAEQAFAEYITLRRQLPFFANARSIRNAIDRARLRQANRLFARMAEALTKDDLITIEAPDILASRVFTGQVEGHHLMASGG

>SYNW1708_UniProt_Q7U5J6
MDQWQERKRPVCLERRFEFDGYSSTRDFLDKLGEHSESTQRFPDISFGSTYVNITIRPEDDNPDAQLNEADRAFAAQIDALLG

>SYNW1709_UniProt_Q7U5J5
MTTTLKPTAVAPPQLPDQEELIRRLLSDTPLLKDTPDHLLQVVNVLESYGIVLDAYSKNLVDQGEKQLLNPFPVFRFFHEGFNLKRLWQHLLGDRINFEYAEYCQKAMFWHGTGGLDAYLDTPEFAEACQRIIQRKAARDPLLALTHRLYPGFAPESIRSLTTIYCLGLFWRVMSDIFVDLARRYAIKEVTCVNDVVHHIRDGLVAAAGNPITYQVTLGGEDIWVLPPEAGLTFLVDVAVPYVEAVFFRGMPFLGTVSYNAQARQISPDISDFKYGALYADPIPSMGAGIPPSLCMQDMFRHLPEELSRWYDENGRGQTDVHVQICVSFQKSMFCVTNAAISGTMPHPLDTDDSEQQAANRAYAEAWSGRLMGCQLVALL

>SYNW1710_UniProt_Q7U5J4
MLLSLLLLIPLLGALVLILWPGAPTSARLREVTIVLLAVQCVASFALLLPFDPADAGLQLVEQARWVHAIGLDYALAVDGLSLPLVLMNGVLCLVAAIASRSIDNRPRIYFALLLVISGAVNGAFLAQNLLLFFLFYELELIPLWLLIAVWGGANRAYAATKFLIVTAVSGVMILAAFLGLAFVSGTMDFSLQPIMAGELGMTAQLVLMGALLIGFGIKIPLFPFHTWLPDAHTEASTPVSVLLAGVLLKLGTYGLLRFCLGLFPEAWQLASPWLAAWAAISVLYGSLAAIAQTDMKRMVAYSSVGHMGYVLLAAAAATPLGLMGALFQMISHGLISGVLFLLVGVVYARTGTRDLNVLRGLLNPQRGLPLTGSLMIIGVMASAGIPGMAGFISEFLIFRGSLQPFPIATLLSMVGSGLTAVYFLLLVNRAFFGRLAIAPGEVVNPRILDRVALREQVPAIVLSLGVLVLGLAPELLSNLSEAATTGLSQISGGLS

>SYNW1711_UniProt_Q7U5J3
MTQELSLPIQTAWLIPLYGFAGMLVSLPWALGLFRRDAHRPAAYLNILLTLLAFGHGSLILQQVFQSGPVDLAFPWLTVADLELDISFSLSLTNLVALELITGLSLFSQVYSLGYMDKEWALARFFALLGFFEGAMSGVVLSDSLFQSYFLLEMLTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDVLLLMGVVALCSYSGAMGFNDLYAWAAQDALSPLAATLLGLGLIAGPTGKCAQFPMHLWLDEAMEGPNPASILRNSVVVTCGAIVLLKVMPILQLSPIAEGVLLVIGSISAIGGSLVAIAQVDIKRTQSYTTTAHMGLVFIAIALQIPVLALLLLFSHAVSKALLSMSIGGVIASTNCQDITELGGLGSRMPATTTAFVVGGAGLVGFLPLGGFLALAQSIELLSVRSIPFMGVFLLTNALTALGLVRVFRHVFLGNPLIKSRRSAEVNWQMALPMVALSVVVLLTPLLLVRLESLDGLLAFPLWAAGLVVGSGLIGLVAGALLPLSKAWSRSLNPWLRWFQDLLAYDFYTENFYRLTIVNVVARVSRLAFWFDRTVVDGVLNGVARLSLQSAEGLKLSVSGQSQSYVLTVLVAIVLFLTSVSWFLT

>SYNW1712_UniProt_Q7U5J2
MATPSPTPRRRTTRSSAAANKTVDVNPVATPATPAASTAATPAPTPAPSTTRRSTTTTRRSAASGSAGGGSVAKPVSNTAPAASPVQGIALGMIETRGMVPAIEAADAMTKAAEVSLICREYVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLVAAHIIARPHQEVEPALIVSGATRRL

>SYNW1713_UniProt_Q7U5J1
MEIMQVMGTLVCSFRVAGLDHMHLRILRNAKGKKLVAVDPVGAREGNWVFTASGSAARHACPDNKVLTDLTIGGIIDHWNPDG

>SYNW1714_UniProt_Q7U5J0
MLIVKVIKPLVSTNRIPDFEHKHLQVVQDGSAKKVAVDAVGAKPGDWVICVSSSAAREAAGSKSYPSDLTIVGIIDHWEPDPPKTPAPAPAPTPAPTANPAGGASV

>SYNW1715_UniProt_Q7TTT8
MVRSMPLRGGRPQAPTAPTRWQLQNTVFAAESQNQPSASEAVVSSTRDAALQRRRALTTDGKAATLVQGSVGGGRVRSARDQRQPGWVRRDKGATSGVPFNLSRSSLPITNRQHPLTDTAANARLRAYEQEVKGRFDRIVPLLQRVSALQHEPDFIEQAQRLTRAELGFDLPQHILERAWVRPLDMRALFAWCVFESHRLFSDRFFQDDPLDGAAGSVAARDFEQFLLDCGIHLLDVSPCADGRLAHTVAYALRIPFSAVRRRSHAGAMFDVENTVNRWVKTEHRRHREGMPNPSTEPTRYLKVVTYHFSSLDPQHQGCAAHGSNDELAAAAGHQRLLDFREAVENSFCCGASVDLLLIGLDTDTDAIRVHPPSRDSEMVLDQWLCARELHAATASMTADQAMAQIAEAIEAGASGPMEPGMVAFLTRLIANNCSQIDYVQDLHGAPYPDAGHAERFIGVGIGFKEVHLRNLTYFAHLDTVEEGAPDLDVGVKIFKGLNVSRDLPIPVVVRFDYSGRVPGARERAIADCQRVNQAIADRYGELVNQGLLHTCLTVRDRNQTAPAEVVGSTLAPPLQEAH

>SYNW1716_UniProt_Q7U5I9
MARLSSRELALERRKALTTSGKKSSVAAGDGANRVRTASDVRPTRTDAAAAVEPTAPAVSAPVKPTVSFTPASPSSSSHVKPQRHPSRDLVLARRDALSRRGKTADTSRDRNRADVARQTQAAAPVAASAEEQKTCGCGGKRAAGKVQLSAPTTSLKPRSDRRSAAPKRRAIENPSRALVLARREAMAKHGKTAGKQPTSAAAVARQANPDLTSRELAQQVRELRTKAGARNKQSAGATRPTGPNRHGAKQAAAADAHWKVGESTTSTGQTVTGTQANRSVKTTGNEASTCRSITGTEYLGAEVFQTFCQQAPEPTTPAKVRVTATSHGNRVTGNEVGRSEKVTGDEPGTCKSVTGTEYISANQSAAYCGSSQVSQRKVGHSLTQQGRPVSGVMVGRSSSVTGDEAGAGRSLTGDQYLGSDPLPDGRPAAKVGQSGTLSGTGVTGTLVGRSSQVTGNEFGSCHRVTGDQYISAEQVNAFCGSKPEPEAAKVGFSITNRNQVVSGTRTGRSERVTGDEPGTCKAVTGTPYAGLENAGQHCGTSAVQAIRERTPVRLGTPSAAMTGIQPGVGGVMTGDEKGACEAVTGTPYVGADQLATACGNEAPAGTDSHGQAPEGAAWTRFSVMSPARAAQQQRDDQGAVTGTSYEQGNRITGPFDLAGGKVTGTEQFRFDNREFQRRQFQPTVAVVSEPAEQPASRVTGEGSSTKITGDDWDRGEHVTGTEGVSARRRNPTRPGPMSATVPHERKRNEENEWPVSRVTGSSGNTEKGSLITVSGGARG

>SYNW1717_UniProt_P0A4S5
MPFQSTVGDYQTVATLETFGFLPPMTQDEIYDQIAYIIAQGWSPLVEHVHPSNSMATYWSYWKLPFFGEKDLNVVVSELEACHRAYPDHHVRIVGYDAYTQSQGACFVVFEGR

>SYNW1718_UniProt_Q7U5I8
MSKKYDAGVKEYRDTYWTPDYVPLDTDLLACFKCTGQEGVPKEEVAAAVAAESSTGTWSTVWSELLTDLDFYKGRCYRIEDVPGDKESFYAFIAYPLDLFEEGSITNVLTSLVGNVFGFKALRHLRLEDIRFPMAFIKSCYGPPNGIQVERDRMNKYGRPLLGCTIKPKLGLSGKNYGRVVYECLRGGLDFTKDDENINSQPFQRWQNRFEFVAEAIKLSEQETGERKGHYLNVTANTPEEMYERAEFAKELGMPIIMHDFITGGFTANTGLSKWCRKNGMLLHIHRAMHAVIDRHPKHGIHFRVLAKCLRLSGGDQLHTGTVVGKLEGDRQTTLGYIDQLRESFVPEDRSRGNFFDQDWGSMPGVFAVASGGIHVWHMPALVAIFGDDSVLQFGGGTHGHPWGSAAGAAANRVALEACVKARNAGREIEKESRDILMEAGKHSPELAIALETWKEIKFEFDTVDKLDVQN

>SYNW1719_UniProt_P0A329
MANETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARPHREVEPALGNGNFLGQKD

>SYNW1720_UniProt_Q7U5I7
MQRLTIATGNPIKVSEIEAMLGPLPLEVQRQPSDLEVDETGETYLENASLKASAAALRTNEWALADDSGLEVDALHGAPGLFSARYASGNDTKIQRLLEELNSSPYRSACFRSTMVISDPSGTCVASAEGVCWGELLLKPAYAGGGFESLLWVREARCTYGELNASQLTRLGSRGKAARALAPDLRRLLNLN

>SYNW1721_UniProt_Q7U5I6
MTRFASFEARERRRGGSALVTGTEVKPPQGGASCVVTTDSESPRLQRQNSHVQSIELRTHVFIDSLQPQLAAYMGSVSQGFLPIPGDACLWMEVSPGMAVHRVTDIALKASDVRLGQMVVERAFGSMALYHRDQSTVLHSGDVVLEAIGSTIEQRSPADVSWTEVIRAITPDHAVLINRQNRRGSMIEAGMSMFILETEPAGYVLIAANEAEKASNITLVDVKAVGAFGRLTLAGREGDVEEAAAAAMRAIETVNRRSTFR

>SYNW1722_UniProt_Q7U5I5
MYRMNSVFSAVITGAGSGLACRSAADTVRLSTLRTPVMSEQTPVNAVELNADQALGMVSFGLMQRLAKDGQVELPWLETAVDSEVERARQLRQRLELTALAINTGAPLTTAEVTLLLGARPGSEQVERGGLVARRVSRNVWRLSKLEGSDRSDRYDGFRRRL

>SYNW1723_UniProt_Q7U5I4
MAGPTLLKESGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILSERDLAGLADAHEELDRVARELLQRRPEIRTLFLVGSCPSEVIKLDLARAAERLNDELQGRVRVVNYSGSGIETTFTQGEDGALAALVPLLPSSAERQLLLVGTLADAVEDRLIHLFGRLGIDRVRSLPPRQSTALPPVGPGTTVLLTQPFLTDTARLLRNRGATVLTAPFPLGAEGSRRWMEAAAQAFEVAPSHVATVLDPLMERARIALEPHREVLAGKRIFLLPESQLELPLARFLQRECGMELVEVGTPYLNREQMAEELALLPEGTPVMEGQHVELQLDRVRDSAPDLVVCGMGLANPLEAEGIATKWSIELVFSPIHGIDQAGDLAELFSRPLRRRQLIHPGLHPTQPDQPVHA

>SYNW1724_UniProt_Q7U5I3
MDLTLWTYEGPPHVGAMRIAASMQGVHYVLHAPQGDTYADLLFTMIERRGQRPPVTYTTFQARDLGGDTAELVKRHVREAVDRFQPDALLVGESCTAELIQDQPGALAQGMGLTMPVVSLELPAYSKKENWGAAETLYQLVRGLLKQQVPAEPKHDPKRWQQQGRRPRVNLLGPSLLGFRCRDDVLEVQTLLTMHGIDVAVVAPLGAGVEDVHRLPEADLNICLYPEVAESTCLWLERNFGMPFSRTVPIGVGATHDFLVEVHTALGLEPPSPQEGYRRSRLPWYSESVDSTYLTGKRVFIFGDGSHAIAAARICSEELGFQVVGLGTYSREMARPVRAAAKGLGLEALICDDYLAVEAAMAEAAPELVLGTQMERHSAKRLGIPCAVISTPMHVQDVPARMSPQMGWEGANVIFDSWVHPLMMGLEEHLIGMFRHDFEFVDGHQSHLGHAGGSGASQESALSDVPEADEGYVVWTADGEAELKKIPFFVRGKVRRNAEAYARQVGCREISSETLYDAKAHFKA

>SYNW1725_UniProt_Q7U5I2
MTTTLTRPTDGEGSVQVHQDPGLNIQEETLVIAVYGKGGIGKSTTSSNLSAAFSKLGKRVLQIGCDPKHDSTFTLTHKMVPTVIDILEEVDFHSEELRPEDFVFTGFNGVQCVESGGPPAGTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGGFAAPLQHANYCLIVTANDFDSIFAMNRIVQAIQAKAKNYKVRLGGVVANRSADTDQIDKFNERTGLRTMAHFKDVDAIRRSRLKKCTIFEMDDEDEAVQAVRSEYLRLAQNMLDKVEPLEATSLKDREIFDLLGFD

>SYNW1726_UniProt_Q7U5I1
MSTPGTVLITGTTSGVGLNATCALVKRGWTVITANRSPQRAAAAADDMDLPKERLQHVLMDLGDLDSVRRAVDALPDRLDAVVCNAAVYKPKLKQPERSPQGYEISMATNHLGHFLLVQLLLGRLQNSSHPSRRVVILGTVTANSKELGGKIPIPAPADLGDLSGFEAGFKYPVAMASGKPFKPGKAYKDSKLCNMISTQELHRRLHGESGITFTSLYPGCVADTPLFRNTPKAFQTIFPWFQKNITGGYVSQALAGERVADVVAHPDFAESGVHWSWGNRQKKDGQQFSQELSDKATDPDTARRVWDLSMQLVGL

>SYNW1727_UniProt_Q7U5I0
MVTASKTKSSRLPNQPSAEAAANRAATIQRQLDRQELHCSLIALAAKAALILVGCVSVARLSVAYQERLERHGEIAAVVNLESKKLETLQHRFDRLFSIGGAKRFLSEQDQWIAPNRLRVIWR

>SYNW1728_UniProt_Q7U5H9
MATALTSAEVFVALVVAAHAAVLALRLSISLYEA

>SYNW1729_UniProt_Q7U5H8
MEPVQINADAIRRLDLTPLQPWSSQPLPSLLEQGPALELQFDWPRDPSDPRELAECPEPRLWALRADARFPWLPLLLERDQGSLIRHVAMVVPHSFNRSEGLRFEPQALELWITHRLMQLDDLCTATLGRPQRGNLSQMAASLGYELDAGFWTLLS

>SYNW1730_UniProt_Q7U5H7
MLPWWDIPLLIGLGLLAGGLAGLLGIGGGLIFAPLLLWLDLPPHQALATSSFAIVPTALAGLVSHLRSGSLPVRTGLAIGLSAFGSALLFGGLAGVVSGWLLLAMQTLIYVVLAFAVRVREEEATPGEDEETGGQVGLLAGVGCIAGWTAGMLGLGGGLVMVPLMNGPLGVPIHRAVRLSTVAVFCSASAASLQFLHEGRGVPWMGLVLGGVAALAAQWSARRLDRFDAVVLVRLLRGLAIVLAVDSCRRALHLLWV

>SYNW1731_UniProt_Q7U5H6
MPTARSPGRLIPNRIADGPTQMAIDALLLAQATEVPVLRFYRWDGPWLSLGRHQRHWPQHWEQLAREGRLRMVRRPSGGQAVLHAGGLTYALIWPSAPRRRKQAYREACQWLIDGFSQLGLPLQFGDDPALGSGNNCFASSTAADLVDRAGVKRIGSAQCWQHGRLLQHGEILLDPPPTLWQAVFGEAAPPAAAAKLNRLTLDQQLINAMAMAWPDVAWEEMPLSDDEHAQVEGRLRSVCSEFAGIDATI

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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