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BMC type: CsomeACy


Organism: Paulinella micropora. Eukaryota; Rhizaria; Cercozoa; Imbricatea; Silicofilosea; Euglyphida;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       PCKR_881 (fasta)
            PCKR_882 (fasta) HMMnopfamclust3_1 RMM1 (HMM details)
                 PCKR_883 (fasta)
                    PCKR_884 (fasta)
                     PCKR_885 (fasta)
                       PCKR_886 (fasta)
                             PCKR_887 (fasta) HMMnopfamclust3_1 RMM2 (HMM details)
                                   PCKR_888 (fasta)
                                             PCKR_889 (fasta)
                                                     PCKR_890 (fasta)
                                                          PCKR_891 (fasta) Tdp_wintergreen CsomeACy (HMM details)
                                                              PCKR_892 (fasta)
                                                                PCKR_893 (fasta) H_greenApple CsomeACy (HMM details)
                                                                         PCKR_894 (fasta) HMMrbcL_1_Csome CsomeACy (HMM details)
                                                                           PCKR_895 (fasta) HMMrbcS_1_CsomeA CsomeACy (HMM details)
                                                                                           PCKR_896 (fasta) HMMcsoS2_1_ACy CsomeACy (HMM details)
                                                                                                     PCKR_897 (fasta) HMMca_2_CsomeACy CsomeACy (HMM details)
                                                                                                       PCKR_898 (fasta) P_neonPurple CsomeACy (HMM details)
                                                                                                        PCKR_899 (fasta) P_neonPurple CsomeACy (HMM details)
                                                                                                           PCKR_900 (fasta)
                                                                                                                       PCKR_901 (fasta)
                                                                                                                                 PCKR_902 (fasta)
                                                                                                                                        PCKR_903 (fasta)
                                                                                                                                         PCKR_904 (fasta)
                                                                                                                                           PCKR_905 (fasta)
                                                                                                                                               PCKR_906 (fasta)
                                                                                                                                                           PCKR_907 (fasta)
                                                                                                                                                              PCKR_908 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_greenApple

BMC-P(map on tree)

      2x P_neonPurple

BMC-Tdp(map on tree)

       Tdp_wintergreen

(complete list of loci)

Protein sequences:

>PCKR_881_UniProt_A0A1L5YD63
MPRRSLLEFEKPLIELEQQIEQIRQLAKYSEADMSQQLLQLENLASRRREEIFSRLTPAQKIQIARHPQRPSTLDYIQLITDEWFELHGDRCGSDDQALIGGIGSIDSQSVIVIGHQKGRDTKENVARNFGMASPGGYRKALRLMNHADRFGLPIICFIDTPGAYAGLVAEQQGQGEAIAVNLREMFRFRVPIIAIVIGEGGSGGALGIGVADRLLIFENSIYTVASPEACSSILWRDSTKSSEAAAALKITSPDLLRLGLIDAILAEPSGGNHWAPLQAAETLKVALINHLHDLRSLTSGELIKKRYRKFRRMGLFLEADVNTSDLTVDL

>PCKR_882_UniProt_A0A1L5YD53
MATVLITGSSRGIGATAARQFALAGWDLLLVARNDHDLADLAIDLRKLGRKVETASIDLASSYDIAPSLAELLERGLTPQVVVNNAGAAYTGSLTEMTLDEWQWLLQLNLTSIFQISKVIIPIFRLNGGGLIINVSSHAARKVFPNWGAYCTAKSALETLTRCIAEEERDYGIRACTLTLGAVDSPLWETNTVCSNFDRRAMLPLEQAAAALVYMAQQSPTQVVEDLTLMPATGAL

>PCKR_883_UniProt_A0A1L5YD57
MTSTLPTTFNSLENTFDTGPVPISTRLRHRLQQAGASFLANDNLAEYLQEGELDQLELEVAGKVRELLRSLVIDIDNDHNTEETAERVARMYLHEVFKGRYHKQPKIASFPNVKELDEIYTVGPISVRSACSHHLVPILGNCWVGIKPGERVIGLSKFARIADWVFSRPHIQEEAVMILADEIEKLCEPKGLGIVVKAQHYCMKWRGVKEPQTSMVNSVVRGAFRHDPSLKQEFFELIRQQESLL

>PCKR_884_UniProt_A0A1L5YD97
MNLRPSTVVIPQQCIKELSLTPLDSWANTSVEDIINTGSIVNLEFNKTRSESDPRELSEYPDIRLWSLHADAAYPWLPLILEHSTGQLVRHVAMLLPHQFSQQDGIRFGSESLELWMTHRLLLLDRWSMNYGLSARSAMIKMARALGYEIDSSFWVRIDNQSKK

>PCKR_885_UniProt_A0A1L5YD55
MTTSLSQAEILIALVVAAHAGILAIRLSVSLYRA

>PCKR_886_UniProt_A0A1L5YD78
MKYALTMEVKQFRKKDLTSRIFKITIKLGLNTILAIKLLQLVNISMHMIEHQNSIISLVKSQLVKLNQMTGRVDHLFSVDSRDYMLREHREWIENNHVRILWTTTAPFPSVE

>PCKR_887_UniProt_A0A1L5YD60
MVSKVSNHGTVLITGTSSGVGLYSVKALVSKGWHVVSASRDIEKTKLAMDALQINSDQVTHVQIDLGDLESVKACAREVQSLTSSLDALVCNAAVYLPRLKDPIISPQGYEISMATNHLGHFLLIQLLLSKIKDSTHHSRRVIILGTVTANSKELGGKIPIPAPADLGDLSGFEAGFQFPVTMANGKKFKPGKAYKDSKLCNMITVRELHRRLHQSSNIIFSSLYPGCVADTPLFRNTPKAFQAIFPWFQKNITGGYVSQELAGERVADVVMSPTFAQSGVHWSWGNRQRKDGKQFIQELSNQASDEVTAKKVWDLSMNLVNI

>PCKR_888_UniProt_A0A1L5YD74
MTAFRPDGEGSLQVHQDPTVRIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKRVLQIGCDPKHDSTFTLTRRMVPTVIDILETVDFHTEELRPEDYVFEGFNGVMCVESGGPPAGTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGGFAAPLQHAHYCLIVTANDFDSIFAMNRIVQAINAKAKNYKVRLGGVIANRSEDTDQIDRFNVRTGLRTMAHFKAVDAIRRSRLKKCTIFEMEDESDEVIAVQQEYLNLAQRLLDDVEPLSAEPLKDREIFDLLGYD

>PCKR_889_UniProt_A0A1L5YD85
MELTLWTYEGPPHVGAMRIATSMEGLHYILHAPQGDTYADLLFTMIERSDRRPPVTYTTFQARDLGGDTADLVKRSIAEAVNRFQPETLLVGESCTAELIQDQPGALASGMNLGIPVVTLDLPAYSKKENWGAAETFYQLVRTLLKSELPYSKKQKPSQWRVEKRRPRVNLLGPSLLGFRCRDDIREITILLASLGIEVNVVAPLGAKPSDLMRLPLGDLNICLYPEVAAPLCNWLERNFGMHIVRTIPIGIGATQAFIEEVCTLLGLSIPLVNNIQQSSRMPWYSQSVDSTYLTGKRVFIFGDATHAIAAARVASKELGFQVVGLGTYSRELAREVRSAAEEFGLEALITDNYLLVEQAMAEAAPELVLGTQMERHSAKRLGIPCAVISAPLHVQDVPARYSPQMGWEGASVIFDSWVHPLMMGLEEHLIGMFRHDFEFVDGHLSHLEGATAPDQGLKTTVQTTKNSSNSAEELMWTSSGELELSRIPFFVRGKVRKNTEAFARERGISEISDEVLYEAKAHYNR

>PCKR_890_UniProt_A0A1L5YD76
MTVSPVQSGINVPSLPNVRKENGQREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILGERDLAGIADANEELDRVVSDLLSRRPEIRTLFLVGSCPSEVIKLDLGKAAERLNTRYNGSVRVLNYSGSGIETTFTEGEDQALHSMVPLLPSSDEDQLLIVGTLADGVEERFKKLFHGFGISNVRSLPPRISTDLPPIGKGTRILLAQPFLSVTARALISKGAKLINSIYPLGVEGSAQWMMEAAKAFGVNTHQVEQVISPLVNRGRIALAPFRQELQGKRIFFLPDSQLEIPLARFLCRECGMNLVEVGVPYLDRQIMAPELALLPENTVISEGQHVEYQLERVRSSFPDLVVCGMGLANPLEAEGITTKWSIELVFSPIHGCDQAADLAELFTRPLSRRSLLRWE

>PCKR_891_UniProt_A0A1L5YD71
MLPIVREQYTPGTKAFFIALPPIADMSKITSFDDDANQRRRSLTITGTNLSGKSSGASCVITTDSEGMRIARQSSNVQSIELRTYVFLDSLQPQLAAYMGTVSQGFLPIPGDACLWMEVSPGMAVHRVTDIALKASTVRLGQMIVERAFGSLAIYHRDQSNVLHSGDVILDAIGSNADQRSRCEVSWTEIIRAITPDHAVLINRQNRRGSMIQAGMSMFILETEPAGYVLIAANEAEKASNITVVDVRGVGAFGRLTLAGREGDVEEAAAAAMRAIALINR

>PCKR_892_UniProt_A0A1L5YD61
MFIKMNQNNKILMLATGNSHKVKELKKVFRELDIEICCQPEGLNVEESGSTYLENARMKAITVAKLTGYWTLADDSGLEIDAIGGAPGIYSARYAPDDNQKINRILNELKGNYYRSASFNTFISLANPIGQTIVESQGICKGEILEAPSGVGPGYDSIFWVKEAGMTYARMPEHVKNKIGSRGKATKAIVRNLKCCLS

>PCKR_893_UniProt_A0A1L5YD67
MANETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLVAAHIIARPHREVEPALGGSNFAGQKD

>PCKR_894_UniProt_A0A1L5YDA9
MSKKYDAGVKEYRDTYWTPDYIPLDTDLLACFKCTGQEGVPREEVAAAVAAESSTGTWSTVWSELLTDLDFYKGRCYRIEEVPNDKESFYAFIAYPLDLFEEGSITNVLTSLVGNVFGFKALRHLRLEDIRFPLAFIKTCGGPPNGIQVERDRMNKYGRPLLGCTIKPKLGLSGKNYGRVVYECLRGGLDFTKDDENINSQPFQRWQNRFEFVAEAVKAAEQETGERKGHYLNCTANTPEEMYERAEFAKELNQPIVMHDFITGGFTANTGLARWCRKNGILLHIHRAMHAVIDRHPKHGIHFRVLAKCLRLSGGDQLHTGTVVGKLEGDRQTTLGYIDQLRESFVPEDRSRGNFFDQDWGSMPGVFAVASGGIHVWHMPALVAIFGDDSVLQFGGGTHGHPWGSAAGAAANRVALEACVKARNAGREIEKESRDILLEAAKHSPELAIALETWKEIKFEFDTVDKLDVR

>PCKR_895_UniProt_A0A1L5YD69
MPFMSTVGDYQTVATLETFGFLPPMTQDEIYDQIAYIIAQGWSPLVEHAHPSRSMATYWSYWKLPFFGEKDLGVIVSELEACHRAYPDHHVRLVGYDAYTQSQGACFVVFEAR

>PCKR_896_UniProt_A0A1L5YD92
MASTSSREAALERRKALTTAGKKTTKQYTASPNRVRSAADARPSRTSAKAPEIKPSISVKSSSSLGRSTPSLPSLGRASSEKSVNSRSAKPRNNPSRELVLARREALSRRGKKADHSKDRTRTEVFVAEQKTKSIAVTSQDRPVAKSNKPLNIKVSSAPIMSSANASSERRATSNRKSILNNSRALVLARREAQSKHGKLAKKSSNSSAAVARQGNPGLTSRELSQRVRELKSKNGASGTSRNGGGTTRPTGPRRGSNKLAESIDAHWKVGISETSRGQLVTGTQANRSSKTTGNEASTCRTITGTEYLGSEIFRDFCKSEPTITQPPKVAITATSHGNKVTGNKVGRSTKVTGDEPGTCKNITGTEYISADQANQYCGGMLPSNRKVGHSQTFGGHQVSGVMVGASQKVTGSEAGATKQLTGDQYLGTEPVTSGRVPTKVSSLHTLKGTSVTGTYVGRSEYVTGDEPGACRRITGDEYIGSQQYQQFCSTKPAPEAAKVGFSLTNKAKIISGTRTGRSEKVTGDEPGTCKAVTGTPYAGLEQADGWCRSNQINAIRQRTTANIGASGAQPSGLQPGIGGVMTGAEKGACEPITGTPYFGSDQLNATCGAATNANADYPQPLAVAPWQQFSIQLPSPARLAQCKARTVTGTSYEQGSKITGPFDMAGGKVTGTEQFRFDRRSTKSRPMPKLEAIDNSTKSSLPISRVTGEGISAGLRITGDDWDRGDHVTGTEGASARRRNPTRPGPMGAMTTFQSKRNSELEQPISRVTGSSGNTNKGSLITVSGGARG

>PCKR_897_UniProt_A0A1L5YD73
MIDHSSVPQTTGNCIKRAPSRRFESGISSQVMIKDDVDKNDQITYNVIPNALKTSKSQLHPLTSGVDNKLLRGYEIDIKGRFDRIVPTLKRLSTFQREPDFLTKADSLTKTELGFGMPLPILEKAWVKGIDMQSLFAWSIFEAYQQISNDFFRCDPLVGASGSMRAKFFEAFLLECGFHLLDITPCADGRLAHTVAYALRLPFSAVRRRSHAGALFDVENTVNRWVKTEHLRYREAKPNPALSPTRYLKIVLYHFSSSDPNHKGCAAHGSSAKDAASAGLARLNDFRQAIENSFCCGASVDLLLIGIDTDTDSIRIHIPGVNGQTDLNTWLDVRDVYEATCDMMVDTARKTIISMVNQAASVGLPDKGMVKFISYLIENNISQIDYVKQFHQAGYADLDHAERFIGVGIGFKEIHLRNLTYFAHLDTVEEGAPDLDVGIKIFTGLNVSRDLPIPIVVRFDYHSNVPRARERAIKDCQRVERAIQERYQKLYNDGMLHILLTVRDRDQHSPPESVKSTIKLEVGGGH

>PCKR_898_UniProt_A0A1L5YD87
MLICKVLKPLVSTNRIPDFEHKHLQIVLDGSSKKVAVDAVGCVPGDWVICVGSSAAREAAGSKSYPSDLTIVGIIDYWDPQTGSSQSTITSSSKATNLGDK

>PCKR_899_UniProt_A0A1L5YD94
MEIMQVVGSLVCTQRVDGLSHMNLRILRNEKGKQMIAVDPVGANEGNWVFTSSGSAARFACVDPATFTDLTIGGIIDNWPLDYL

>PCKR_900_UniProt_A0A1L5YD83
MINALHPRILGYLGRALSLELSAVQQYMTQASLVTLWGEQEAAQRFRNETVEEMQHAEKIVQRMLELGVIPAASQLRPVTISSDLIGLLKQNIDLESDLINHYDEAVNFCRSIGDTISIEFFRDLLNDEKHHMDELNQWLHNLKPSYPQTSIQSATF

>PCKR_901_UniProt_A0A1L5YD81
MIVSLPWATGWVKRNAPRPPAYLNLIISLVAFVHGSLAFNDVLQTGSHIIQFPWLNQADLRLSIILDISPTNLAVLELITGLSFLSQLYALGYLDKEWALARFFALAGFFEGAMSGVVLSASLFQSYFLLEMLTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDILLLMGVVSLSALAGGMDFDNLYKWADQNTLTTLTSTLLGLALIAGPTGKCAQFPMHLWLDEAMEGPNPASILRNSVVVAVGALVLLKLMPILQYSPVTIAVLLAIGIISALGGSLVSIAQVDIKRTLSYSTTAYLGLVFIAIALQQSSLALLILFAHGVAKALLSMSIGSVIAVSNCQDITELGGLANRMPATTSAYLLGAAGLTGLIPLGCFWCFGLSIELFSKQAPWLAAVYLLTNTLTALNLTRVFRQVFLGNPMTKTRRAIEVNWQMALPMVILMVITILTPWMMTKIGILPAISAFSLEAAIVVAISGLTGVMIGIMLPLNKAWSRSIKQSVRWLQDLLAFDFYTDRFYRLTIVNIVSSFSRLAAWFDTNIVNGLVNYIGRFSLDSAEGLRLSVSGRSQTYILTVVITIVFLLASLSWLAS

>PCKR_902_UniProt_A0A1L5YD70
MLSPLLLIPFLGAITLMLWPTKISPMGLRSITAALLSIQLLWNCGILFWFDSSSGIMQMSESIPWISSIGLNYDLAVDGLSLPLLFINGGLSLIATWVSTAVTNRPRLYFALLLIITGAVNGAFLAQNLLLFFIFYELELIPLWLLIAIWGGKNRAYAATKFLIFTAISGILILAAFLGLALATNSVDFSLRPLLSQELNISTQLVLMGALLIGFGIKIPLFPFHNWLPDAHTEASTPVSILLAGVLLKLGTYGLLRFCVGLFPEAWYLLAPWLAAWAALSILFGSLAAIAQTDMKRMVAYSSVGHMGYVLLAAAAATPVSLLGAEFQMISHGLISGLLFLVVGVVYSTTGTRNLEILRGLLNPQRGLPLTGSLMILGVMASAGIPGMAGFLGEFLIFRGSLQTFPIATILSMVGSGLTAVYFLLLVNRAFFGRLTIAPSGNPTVLKQVYLVDQIPALSLCFSVLILGLVPSLLSNLTETSTNLLSAIAGFVQIGALT

>PCKR_903_UniProt_A0A1L5YD77
MSETISKLLLKGETLLQDSPDHLLQVIGVLESYGEVLDAYSINLIDQGQRQFLNPFPMFRFCNGQISFNRLYRHLLGDRINFEYAEYCQKAMFWHSTGGLDVYFNSDEFLSICKEVIEYKSQEDTLVRLLNPMFKEFLPELIRSSATTHLLGVFWRVMSDLFVDLGRKYRDGTINNIKEVVAFIRTCLVAAAGKTVSYKVEISGRSFDILPATANLNFLVDVAVPYVEAVFLRGMPFLGTVSFNAQAQQISPDQSQFKYGALYADPLPTMGAGIPPSLLMQDMYRHLPQDLYDWYKYHGRGEADMKMQICISFQKAMFCVTNGAIAGTFPYPLSTTVQEEQTANQAYAKAWAGRLAEARIDTLPNLKGREFNSLRLA

>PCKR_904_UniProt_A0A1L5YDB5
MAKYLDAIVNQSWTQRQRPERLERRIEFTDYQDTRNFLDKLNTLSQNRERFPDISFGRTYVNLTLHVKDNMSSLDSLDHDFAQQIDDLL

>PCKR_905_UniProt_A0A1L5YD80
MELSPLLVNPVSIQAINTTKAPLPVGPYNQAIVAGDWVYCSGQISLDPISGKMISDDSIETETYQVLTNLRAVLESAGVTTDQVVRTTIFLTNLEDFAKVNTVYGEFFNKGLYPARACVEVKALPKNARVEIDCIAFLR

>PCKR_906_UniProt_A0A1L5YDA0
MITVALAKGALLRESIECFAAAGFDFRSFLEKENRQLMIPSVCGRARALLLRNADVPVYVAYGQAQIGIVGYDVLRETRSPVAQLVDLQFGECYMHIAVKASSHYKKTSDLPAHCRIASKFTHCAEEYFNRLDKPIELIALTGSVELGPITGISEAIVDLVATGRTLRDNGLVSIEKLFRSTARLIGHPLSLRLDNGELQETIDRIATISSEIEK

>PCKR_907_UniProt_A0A1L5YD89
MSSKDSRRLRRLLPYLARDGRRLGLTLLMLIPVALMAAVQPLLVGQVIAVLRDESTLSWLAGLPVGPALRLLISSLCFAILIRFSLLGVQVFNIQAVGQRLTARIREDLFSHAMALSLYFHDRIPVGKLLTRLTNDVDALAEVFSSGVVGIIADIVTLVVIILTMVSIEARLGFILLMTQVPMTFAIISLQRRYRKANYKVREDLSQLNADFQENLQGIEVVQMFCREAFNSIRFARTGSSYRKAVDGTIFLDSAISALIEWIALIVVAMILALGGSMVTHKLMGLGTLTTFILYSQRLFDPLRQLAERFTQIQGGLTAIERIGELLEQPIEIVDLANQYSSLTPNRNSDQEFVHASEIIFEDVSFSYRQDEPILRALSFRVPIGKHVAIVGPTGSGKSTIIRLLCRLYEPQKGKILLDGIDIRALPLSVLRHRLGVVLQDTFIFSGNVAMNLRLNAQITNAQILKTCQSLGISPFLNSLSKGLETELRERGGNLSSGERQLLSVARVAIRNPSVLVMDEATASMDPSTEATLQRDLESLLDQRTAIVIAHRLATIEAADQILVLKQGKLVEAGTHVELKHQGGIYTRLIQVQERGLISH

>PCKR_908_UniProt_A0A1L5YD93
MKARICSTSKSGSTLVLSQDKDIDLIELEQLLGSVGWTRRPIKLVRCALEHSLFKVGIWRHDRRIPRLLGFARCTGDGVIEATVWDVAVHPHYQGIGLGSALMKYVIDTLKVTGVERVNLFADPDVLNFYIQQGWELEPKNRRCAFCYSA

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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