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BMC type: CsomeACy


Organism: Prochlorococcus marinus (strain MIT 9515). Bacteria; Cyanobacteria; Synechococcales; Prochloraceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

     P9515_06011 (fasta)
               P9515_06021 (fasta)
                   P9515_06031 (fasta)
                    P9515_06041 (fasta)
                      P9515_06051 (fasta)
                             P9515_06061 (fasta) HMMnopfamclust3_1 PVM (HMM details)
                                   P9515_06071 (fasta)
                                              P9515_06081 (fasta)
                                                       P9515_06091 (fasta)
                                                         P9515_06101 (fasta)
                                                              P9515_06111 (fasta) Tdp_wintergreen CsomeACy (HMM details)
                                                                  P9515_06121 (fasta)
                                                                    P9515_06131 (fasta) H_greenApple CsomeACy (HMM details)
                                                                              P9515_06141 (fasta) HMMrbcL_1_Csome CsomeACy (HMM details)
                                                                                P9515_06151 (fasta) HMMrbcS_1_CsomeA CsomeACy (HMM details)
                                                                                                P9515_06161 (fasta) HMMcsoS2_1_ACy CsomeACy (HMM details)
                                                                                                          P9515_06171 (fasta) HMMca_2_CsomeACy CsomeACy (HMM details)
                                                                                                           P9515_06181 (fasta) P_neonPurple CsomeACy (HMM details)
                                                                                                            P9515_06191 (fasta) P_neonPurple CsomeACy (HMM details)
                                                                                                             P9515_06201 (fasta)
                                                                                                              P9515_06211 (fasta)
                                                                                                                P9515_06221 (fasta)
                                                                                                                     P9515_06231 (fasta)
                                                                                                                         P9515_06241 (fasta)
                                                                                                                                      P9515_06251 (fasta)
                                                                                                                                         P9515_06261 (fasta)
                                                                                                                                              P9515_06271 (fasta)
                                                                                                                                                  P9515_06281 (fasta)
                                                                                                                                                            P9515_06291 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_greenApple

BMC-P(map on tree)

      2x P_neonPurple

BMC-Tdp(map on tree)

       Tdp_wintergreen

(complete list of loci)

Protein sequences:

>P9515_06011_UniProt_A2BVJ9
MPKTKTLVKICGITSIDQAVQIAELGTNAIGIISVNESPRYISPEKKKEIFKTLKILYPNIERVSVVKNSPIESIIKNFLGEPNETIIQLHGDEDVDYCQQLRQKIPNIGIWKAFRIKNKKDIEKIKIYEKFVDAILLDSWNKETYGGSGKRIEKSYLEELSFSKPWWLAGGVSKEWIYEILKKIKPNGIDISSSVEISPGIKDLEKTKNIIREINK

>P9515_06021_UniProt_A2BVK0
MRSLQIFKIWGIPFKIHPYWFAILFLFSWSITNQVNLTSSEIYNIKEAWLIGFLTSFFLLTTIIFHEVFHTFVSLNHGVKIKKITFYFLGAILQIDKECQTALGNIKIAIVRPFLCLFTALILLLISYLSKSNEHIFTNIVNRLAILNLFLAFLNLIPVGSLDGGNLLKSIIWYFSGSKNKGRNFLNKFTLVLSTLFFLSGIAILFGLNFYYGLLISFLGLFGINSSKSESQFFRIENILKFSKVSDLKFKPLRKIEFDSNFVELNNVVKNKKDNQDKYLFLTNSGRWDGFVEEKILKDVSVKKWKHTLVGEFKKPIKNFISIRGSTELWRAIEKLESTNEGFLLVLNSAELPLGIIDRNKIGYFVFSKLGVELPYNLISKFNNKNQYPLGIEFPKIINLMKQKGDI

>P9515_06031_UniProt_A2BVK1
MALDLHFLEKTISKVEILFTLRFYYWEGDWISLGYHQKIIPPHWEKLFKDGIIKIVRRPSGGGAVLHSGGITYALTFKKSSYKSFSYELVNNWLIKSFNELGLGLERGNLRKSTIKENCFGSSYISDLVDQYGFKRIGSAQYRKKGAFLQHGEIQLNPPRELWFKIFGEEPPTKIDLNLTNEEIIKYLMKSFLESKTNLKIEKILLKKSDIKKLL

>P9515_06041_UniProt_A2BVK2
MEPSQSINLIILGLIVVMHAGVLALRLGISLARI

>P9515_06051_UniProt_A2BVK3
MSRNYYKSIATDKRSLASAIEKNYKDQEDFVSSVFLGLKVCFTLLAMVSLIKIGYSSKIRLTRLREIKDSYLYEKSRFDVLSRRFDDLISFEGEQRFMKDQEQMISRDIIRVIWR

>P9515_06061_UniProt_A2BVK4
MGNSTKGLVLITGTTSGVGLNTLKPLLRFGWEVIAVNRSNKRAIEIAHQSLTDSEMKNMHFIEIDLSDLDDVRNGCDEILKKFKKPINSMICNAAVYKPRLRKPERSAQGFENSMAVNHFGHFLMINLLIDKILSSENEIYLNGKVTKFKPRITVLGTVTANYSELGGRIPIPAPANLGNLSGFKNGFLAPISMANGKKFKPGKAYKDSKLCNMITVQELSKKYSNERIIINSLYPGCVADTKLFRNTPWIFRFLFPIFQKFITKGYVSQRLAGERVAQVATFKKYAKPAVHWSWGNRQKSGRKAFSQKLSKRIIDSDISKQTYELTRKLVGLN

>P9515_06071_UniProt_A2BVK5
MTSTINKHLDGEGSVQVKQDPKVNIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKVLQIGCDPKHDSTFTLTHKMVPTVIDILEEVDFHSEELRPTDFMFEGFNGVMCVESGGPPAGTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGGFAAPLQHANYCLIVTANDFDSIFAMNRIVSAIKAKAKNYKVRLGGVVANRSKDTDQIDKFNDRTGLKTMAHFKDVDAIRRSRLKKCTIFEMEPTEDVIEVQNEYLSLAKNMLENVEPLEGTPLKDREIFDLLGFD

>P9515_06081_UniProt_A2BVK6
MELTLWTYEGPPHVGAMRVASSMKEIHYVLHAPQGDTYADLLFTMIERRGKRPPVTYTTFQARDLGGDTAELVKRNISEAVERFKPKTLLIGESCTAELIQDQPGALAKGMGFNIPIVNLELPAYSKKENWGASETFYQIIRTLLNDKTNEINNINPQRWKSLGRRPKVNILGPTLLGFRCRDDVIEIQRILSEQGIDTNVVAPLGSSPDDIKRLIDADINICLYQEIAETSCEWLKRKCGMEFTTTIPIGIKNTINFINEVHDKLGLPLTNKEELEHKSKLPWYSKSIDSNYLTGKRVFIFGDGTHAIAAAKIAKDELGFEVVGLGTYSREMARQVRAAAKDLNIEALITNSYLEVEDAMKKASPELVLGTQMERHSAKRLGIPCSVISTPMHVQDVPARYSPQMGWEGANVIFDDWVHPLMMGLEEHLIDMFKHDFEFVDGHQSHLGHTATKGLDNIEDEHGLKNDTLKKNGGVLWTESGRAELTKVPFFVRGKVKSNTEKYALSKGLPEISDETLYDAKAYFS

>P9515_06091_UniProt_A2BVK7
MSKVDFNKETGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILEEKDLAGLADAHEELDRVVNDLISRRPEIKTLFLVGSCPSEVIKLDLATVAEKLNLRFSGQVRFVNYSGSGIETTFTQGEDGALKALIPLMNSTDDEKLLLVGTIANNVEDRFKKIFNSIGINNVESFPPRQSTELPKIGKNTKVILTQPYLSDTVRDLKHRGCEIIYAPFPLGVEGSTKWVLAAAAAFKIPELKVHEVIAPLANRARQALQKHTEILRGKKLFLLPESQLEISLARFLHNECEMELIEVGTPYLNKDLMEEELNLLPDDTKIVEGQHVEKQLDRVRASCPDLVVCGMGLANPLEAEGISTKWSIEMVFSPIHGIDQAADLAELFSRPLTRNQILTSKTLATY

>P9515_06101_UniProt_A2BVK8
MVTSQKKEPDSSSSKNELSPDQTLGLVSLSLMQKLSQKDPSFSWLVDTKPDQINVKKLRDRLELTELAINTGAPLSTTEVSILMGAKPGKSKIERGGLLATKIARNVWKLSKIGQGSSYYRN

>P9515_06111_UniProt_A2BVK9
MEPTSSLNRGESKKGSSLVTGSEVQSQANGASCFITTDSEKSLVSRQASQVEQIELRTYVFLDSLQPQLSAYMGTVSRGFLPIPGDSCLWMEVSPGMAVHRVTDIALKASNVRLGQMIVERAFGSLALYHKDQSTVLHSGDVVLDAIGSEVRKRTKPSTSWTEVIRAITPDHAVLINRQNRSGSMIQSGMSMFILETEPAGYVLKAANEAEKSSNITIVDVKAVGAFGRLTLAGKEGDVEEAAAAAIRAIEQISNN

>P9515_06121_UniProt_A2BVL0
MNFPALTIASGNPKKVSEIFEMLDVLSLEVKKQPEYLNVEETGKTYFENAFLKAKAAALETKTWALADDSGLEVDYLDGRPGIYSARYAKSKNEKISKLLRELSDIPYRSAKFISCMVLCDPKGNLVKDTTGICWGEILKEPKYPNGEFESIFWIKEANCVYGELSHSQLIKLGSRGKAAKNISPFLKKEFGII

>P9515_06131_UniProt_A2BVL1
MATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARPHREVEPALGNGDFLGQKD

>P9515_06141_UniProt_A2BVL2
MSKKYDAGVKEYRDTYWTPEYVPLDTDLLACFKCTGQEGVPREEVAAAVAAESSTGTWSTVWSELLTDLEFYKGRCYRIEDVPGDPEAFYAFIAYPLDLFEEGSITNVLTSLVGNVFGFKALRHLRLEDIRFPIAFIKTCGGPPNGIVVERDRLNKYGRPLLGCTIKPKLGLSGKNYGRVVYECLRGGLDLTKDDENINSQPFQRWRERFEFVAEAVKLAQQETGEVKGHYLNCTANTPEELYERAEFAKELDMPIIMHDYITGGFTANTGLANWCRKNGMLLHIHRAMHAVIDRHPKHGIHFRVLAKCLRLSGGDQLHTGTVVGKLEGDRQTTLGYIDNLRESFVPEDRSRGNFFDQDWGSMPGVFAVASGGIHVWHMPALLAIFGDDSCLQFGGGTHGHPWGSAAGAAANRVALEACVKARNAGREIEKESRDILMEAAKHSPELAIALETWKEIKFEFDTVDKLDVQG

>P9515_06151_UniProt_A2BVL3
MPFQSTVGDYQTVATLETFGFLPPMTQEEIYDQIAYIIAQGWSPVIEHVHPSGSMQTYWSYWKLPFFGEKDLNLVVSELEACHRAYPDHHVRIIGYDAYTQSQGTAFVVFQGR

>P9515_06161_UniProt_A2BVL4
MSKKTSREIALERRKAMSDSGKKAAAYSSTTKERVRSSQDIKISGTQSSPNNQNISKPATKHIPKTQVSRKSSSTTLSSKELVINRRKAMSTHGKSAINSSDRTRTDVKKEIPINTVKSTINKNQEVENSYNTEIKTSKPNVKRRIKQKRKPITNTSRDIVLARREAQSKHGKSASKQNTSAASLARRGDPDLSSREISQRVRELRSKTGATGKKGNGKCRPCGPNKNGAKQNIADASWKVGTSETDSGQIVTGTQANRSVKTTGNEASTCRTVTGTQYMGAEVADQFCQDRPIYKQPLRSTVTATTSGNKVTGNEVGRSERVTGDEPGTCKNLTGTEYISANQSQKYCGDIPKNPSKVKHSTTTDGLKVSGSLPGRSTLVTGDESGSGHQLTGDQYLGSEPNPQGKAFEKVGSYNTLNGNSVTGTGVGRSDHMTGNEHGSCKNITGDEYIGSQQYEKFCGSKPKPEARKVGLSLSSKSNLISGTMTGRSKIVTGDEPGSCKVLTGTPYAGLDQINENCSTEISEDMKSRATINSGNNSNARLTGQQPGIGGVMTGAKKGACKNLTGTPYVGGDQFSKTCDNPSHDTAYANPEKSAGNSWNEFSVKSPSRDKYSEKNTQGVTGNEYENGSKITGPFDMAVDKVTGTEKFRFEPNKNITYKQKMEIEETDRAANTPEKRVTSRITGEGQSVGNVTGDDWDRGDKVTGTEGASSRKRNPSRAGFTSAMPPLEVKRNEEVEKPDFLITGSSGNTREGQLVTFSGGARG

>P9515_06171_UniProt_A2BVL5
MKTFTENIHIQTKESNNLLNPVNLHKLTNNIQNENLFKYESKIKSDFDEIVPTLKEIARIQHHEDFINKAQTISRKNLGIDLPLHILDKSWVKPLDMRALYAWCAFKQHEKLSDNFFNNDPLEGAAGSRGAEDFEKFLLDCGIHLLDITPCSDGRLAHSVAYVMRIPFSSVRRRSHAGALFDIENTVNRWVKTEHKRYRENIPNEAHKDTRYLKVVTYHFSSVDPLHQGCAAHGSNDELAAGEGRNKLYAFKEAVENSFCCGASVDLMLIGLDTDTDSLKIHLSNSDGSIDLEKTISTLDIYNSTINFSGDDAEREICQTISNHSSKDKLQGLEKFMYKLIVNNISQIDYVKKFHKGSYEDIGHAERFIGVGIGFKEVHLRNLTYFAHLDTVEEGAPDLDVGVKIFTGLNVSQDLPIPVVIRFDYSGKVPGAKDRAAKDCNRVNNAISIRYKSLVDKGLLHTCLTIRDRDNIHSAQIIGMSLDKKTEEAH

>P9515_06181_UniProt_A2BVL6
MLICKVVKPLVSTNRIPGFEHKHLQVVLDGSSNKVAVDAVGCKPGDWVICVGSSAAREAAGSKSYPSDLTIVGIIDHWDPNSPKQIEV

>P9515_06191_UniProt_A2BVL7
MEIMKVCGRMVCTQRVPGLGHMNLRILENNKGKKVVAVDPVGAREGNWVFTSSGSAARFACPNPEVQTDLTIGGIIDFWEPN

>P9515_06201_UniProt_A2BVL8
MWNHRDSPSRIEKRFEFEEYQKISIFLKKIDELCKEKNIYPNISFGKNFVSVSIFLDSTEILSNEKEFSTRLDNYFLEK

>P9515_06211_UniProt_A2BVL9
MTAAKLNIDELEAGYPLFCKALRLLILKGNSIKEIERTVCWGHLETLNRCLPGRYKAPTYLMALIKRDINKPNNY

>P9515_06221_UniProt_A2BVM0
MSSSKVIKTSNAPDPVGPYNQAIKAGNFIYCSGQIAIDPVSNEINCLGNIEKETTQVLKNLLAVLNSGGATAEDVIKTTIYLTDLKNFKTVNEIYSDFFKVKNPPARACVEVSSLPKGVLIEIDCVAYLD

>P9515_06231_UniProt_A2BVM1
MEFNKEQTIIGIRVLSDNVIWLWRKNNSAVVIDPALSQPVIEYLKTHNLYLKAILQTHHHHDHIGGTRELIKEWPKVKVIASAKEKDRIPFQNLSVKDGDKLKLLDEEVHVIEVIGHTRSHLAFYIHNKVPILFIGDTLFSAGCGRIFEGTYKQMYNSLKKIKSLPKNTTIYCAHEYTKSNLLWALDLEPENENIKNKLIEVEKKIALKELTIPFLLEEELIINLFLRADNLKRFSYLRANKDTWV

>P9515_06241_UniProt_A2BVM2
MITIALPKGALLEDSISIFKKAGLNFSDALLENNRSLTIESECKRAKALLVRNGDVPVYVSYGQADLGIVGYDVLQESELKVAKLLDLEFGGCHMSLAVKNTSNYSKPTDLPANCKVASKFTKTARAYFDDLNIPVEIVHLTGSVELGPITGMAEAIVDLVATGKTLKENGLSKIDDLFYSTARLIANPLSIRLDSNPLRDVILSIESFKGT

>P9515_06251_UniProt_A2BVM3
MFLNDFNRIKKLGRYLTKDKKTIYLILIVLLPVSFAGAIQPLLVGQAITILKNESTDVWLGKTFFGQSINLIIITLFITVLFRLVLQGYQSYNIQSVGQRLTARIRRELFEHSISLSLKYHDKMPVGKLLTRLTNDVDALAEVFGSGAVGVIADFVSLIVISLTMLSIDKGLAMLLLLTQIPVSYFIIWLQKRYRKANYQVREELSQLNSDFQENLQGLEVVQMFRRGFFNSRKFSNTGIAYQKAVNGTIFYDSSISAFIEWISLAAVSLVLAVGGYLVTSGNIGLGTLTTFILYSQRLFEPLRQLAERFTQIQGGLTAVERINELLDEEIEIKDTFSSKQISKGILNKNYKFKGKIEFRNVNFFYKEGEHVIKDLSFLVNPGEHVAFVGPTGSGKSTIIRLLCRLYEPQDGEILIDDVNIKDIPIARLRNMLGVVLQDTFIFSGDVADNIKLNNEINNQDLENICKELGLDTLLKKLPNGLNTYLRERGGNLSSGERQLLSVARVAIRNPIILIMDEATAFMDPSTEATLQKDLERILNKRTALVIAHRLATIEKSDKILVLKGGALVEEGNHRELRLKKGLYFQLSELQEKGFASF

>P9515_06261_UniProt_A2BVM4
MIFRNKGSSIKKTNNLSQEELLKYYGLNSFEFTHKLKDEIFVCSKNKEFDLIELDQLLQTVGWSRRPIRRVKRALEFSILVVGLWRHDEKFPRLVGFARCTGDGVIEATIWDVAVNPVYQGLGLGKELMKYILKELKKTGISKVTLFADAEVVSFYKRQGWILEPKGSKCAFWYAN

>P9515_06271_UniProt_A2BVM5
MPKISIIIPTYNESQHLSLLLSDLSIFNEGIEIIIVDCNSEDKTRDIAKFYRTNIFKSKEKNRGLQLNLGAKKAKGEWFIFIHADSRLSKGWLKKVKSVIRNKENFIYFFKFKINNEKLIYRFLEIVVNLRSFFLKDPYGDQGLIIHRRTYFKNNGYRKIPLMEDLDFIKRLKNNEHLKMLTIPIYTSSRKWEKTNIISQAFKNWNFRKRWLRGESIKSLYNDYYKKLN

>P9515_06281_UniProt_A2BVM6
MKTYGVLLDKALLIVMAKWHAYGRCKTRLSKDIGKFCSANVQRKMTEHTVSVAKAIENKGLIDISLAISGLGFKKSKRWSNELGVRNFNLQGKGCLGEKMRRQILINKKFNLTKTRNIIFIGTDLPDFCHLDLLNALTKLKKNDLILGPSNDGGYWLIAFSERLLSTDLYLPFINIKWSSEDVLKQTIDNFNQVAITHDFLHRKIDIDTIIDIKKRE

>P9515_06291_UniProt_A2BVM7
MQATNPIWAEVQQLLQKNLSKPSFETWIRPAKFNCFENGLLTLITPNNFTSDWLRKNYSETIEKAAEEICGHNVKVIFKSENNVNNNSNIPDTVSQQSIKSQTRSISTSQGNNTNNRTKKSHSLNIRYVFKRFVVGPNSRMAHAAALAVAESPGREFNPLFICGGVGLGKTHLMQAIGHYRVEIDPEAKVLYVSTETFSSDLIQSIRKDGMHVFKNKYRSVDLLLIDDIQFLEGKEYTQEEFFNTFNALYEAGKQIVIASDRPPSQIPKLQERLISRFSMGLIADIQPPDIETRMAILQKKAEQERMNLPRDLVQFIAGRFSSNIRELEGAFTRAVAFASITGLPMTVQSIAPMLDPNSVGVVVTPKQVIKKVSDFFSVTAEELVSSSRRKPVSQARQIGMYLMRQGTNLSLPKIGDEFGGKDHTTVMYAIEQVEKKLSSDPNVASQVQKIKDLLQIDSRKNL

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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