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BMC type: CsomeACy


Organism: Prochlorococcus marinus (strain AS9601). Bacteria; Cyanobacteria; Synechococcales; Prochloraceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

     A9601_05931 (fasta)
               A9601_05941 (fasta)
                   A9601_05951 (fasta)
                    A9601_05961 (fasta)
                      A9601_05971 (fasta)
                             A9601_05981 (fasta) HMMnopfamclust3_1 PVM (HMM details)
                                   A9601_05991 (fasta)
                                              A9601_06001 (fasta)
                                                       A9601_06011 (fasta)
                                                         A9601_06021 (fasta)
                                                              A9601_06031 (fasta) Tdp_wintergreen CsomeACy (HMM details)
                                                                  A9601_06041 (fasta)
                                                                    A9601_06051 (fasta) H_greenApple CsomeACy (HMM details)
                                                                              A9601_06061 (fasta) HMMrbcL_1_Csome CsomeACy (HMM details)
                                                                                A9601_06071 (fasta) HMMrbcS_1_CsomeA CsomeACy (HMM details)
                                                                                                A9601_06081 (fasta) HMMcsoS2_1_ACy CsomeACy (HMM details)
                                                                                                           A9601_06091 (fasta) HMMca_2_CsomeACy CsomeACy (HMM details)
                                                                                                            A9601_06101 (fasta) P_neonPurple CsomeACy (HMM details)
                                                                                                             A9601_06111 (fasta) P_neonPurple CsomeACy (HMM details)
                                                                                                              A9601_06121 (fasta)
                                                                                                               A9601_06131 (fasta)
                                                                                                                 A9601_06141 (fasta)
                                                                                                                      A9601_06151 (fasta)
                                                                                                                          A9601_06161 (fasta)
                                                                                                                                       A9601_06171 (fasta)
                                                                                                                                          A9601_06181 (fasta)
                                                                                                                                               A9601_06191 (fasta)
                                                                                                                                                   A9601_06201 (fasta)
                                                                                                                                                             A9601_06211 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_greenApple

BMC-P(map on tree)

      2x P_neonPurple

BMC-Tdp(map on tree)

       Tdp_wintergreen

(complete list of loci)

Protein sequences:

>A9601_05931_UniProt_A2BQ18
MPKTNTLIKICGLTSEEQALQVSKLGAHAIGIISVEESPRFISAEIKKKIFKTLERFYPKIERVSVVKNCPIDLIIKNFLGSPSETIIQLHGDEDIDYCKKIRDKIPNIGLWKAFRIKTEKDIDKIKPFEDFVDAILLDSWNKETYGGSGEKIKSSYLKNLQFSKPWWLAGGISIEWINEILTDIKPDGLDISSSIEISPGLKDIKKTEELFKLLKGI

>A9601_05941_UniProt_A2BQ19
MRSWQIFKIWGIPFKVHPYWFAILFLFSWSISNQVNLTSSDIYNTKEAWIIGFFTSFFLLSSIVFHEIFRTFVSLNQGVKIKNITFYFLGAILQIDKYCQTALGNIKIAVVKPLLCFATAFILLLVSSNSASQEQIAVNVISRVGIFNLFLGFLNLIPIGSLDGGNLLKSIIWHFSGSKNKGRNFLNKVNLLLSFFVLFFGIVCLFRFNFYFGFILSLLGLFGVNSSKSESQFFKIENILKFSKVSEIKLKPLRKIEYDSNFSEFNTLIKNKKDISDKYYFVTNNGRWTGFVNESILKTVSLNKWERNFVGDFKKPIDNFESVSYNDKLWRTIERLEETNEGFLLVLNAADIPLGIIDRSKIGNFVLHKLGLNLPSEIVNKLNFKNNYPLGIELPRIINSMKQKGDL

>A9601_05951_UniProt_A2BQ20
MALDLNSLDQTISNPEIILTLRFYYWTGDWLSIGYHQKEIPIHWENLLSNGEINIVRRPSGGGAVLHSGGITYALTFKKTYYKVLSYEMVNNWLIKSFRELGLNLQYGNLRKSHIKTNCFGTSLISDLVDKDGFKRIGSAQFRKKGAFLQHGEIQTNPSKDLWYKLFKEEAPPKVNLGLTNDEIVQHLRNSFLKNKSNINFKNIEIDNKNIRKFLCKSY

>A9601_05961_UniProt_A2BQ21
MENIRNNFFTMEPTQTINLIALSLIVVIHAGVLALRLGISLGRN

>A9601_05971_UniProt_A2BQ22
MTKSFYKNSNFYKKYLGPVFIKRQHKQDNFVSLIFLIIKICFSLLAIISLIKLGYSSKVRLTRLREIQDSFSYEKYRFNFLTNKFDDLFSSEGEQRFMKDQDQIISRDIIRVIWR

>A9601_05981_UniProt_A2BQ23
MSQNNKGLVLITGTTSGVGLNSLKPLLRFGWEVIAVNRSNKRAITIAEEFLTKDEIQNVHFIEIDLSNLDDVRKGCDEILERFKKPINSLICNAAVYKPRLKRPERSPQGFENSMAVNHFGHFLMINLLIENILSSEREIVLNGKSTLFKPRITVLGTVTANFSELGGRIPIPAPADLGDLSGFKNGFLSPISMANGKKFKPGKAYKDSKLCNMVTVQELSKRYSAEKIIVNSLYPGCVADTKLFRNTPWLFRFLFPIFQKFITKGYVSQRLAGERVAQVATSKEFAKPSVHWSWGNRQKSGRKAFSQKLSKRIIDAKTSQQTYDLTKQLVGLG

>A9601_05991_UniProt_A2BQ24
MTSTINRPLDGEGSVQVKQDPKINIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKVLQIGCDPKHDSTFTLTHKMVPTVIDILEEVDFHSEELRPTDFMFEGFNGVMCVESGGPPAGTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGGFAAPLQHANYCLIVTANDFDSIFAMNRIVSAIKAKAKNYKVRLGGVVANRSKDTDQIDKFNERTGLKTMAHFKDVDAIRRSRLKKCTIFEMEPTEDVIEVQNEYLSLAKNMLENVEPLEGNPLKDREIFDLLGFD

>A9601_06001_UniProt_A2BQ25
MELTLWTYEGPPHVGAMRIASSMKDIHYVLHAPQGDTYADLLFTMIERRGQRPPVTYTTFQARDLGGDTAELVKKNIKEAVERFKPKTLLVGESCTAELIQDQPGALAKGMGFDMPIVNLELPAYSKKENWGASETFYQLTRTLLKEKVSSSEKISPLRWKELGRRPKVNILGPSLLGFRCRDDVIEIQRILSEQGIDTNVVAPLGASPDDIERLIDAEINICLYPEIAEASCEWLKRNFGMEYTNTIPIGIKNTIEFINEVHKKLDLPLTNKEELENKSKLPWYSKSVDSNYLTGKRVFIFGDGTHAIAAAKIAKEELGFEVVGLGTYSREMARQVRATAKDLNVEALITNNYLEVEDAMKKAAPELVLGTQMERHSAKRLGIPCSVISTPMHVQDVPARYSPQMGWEGANVIFDDWVHPLMMGLEEHLIDMFKHDFEFVDGHQSHLGHTATNTNNILNSDEKKEKNSKEGIIWTESGRAELTKVPFFVRGKVKTNTEKYAILRGIPEISDETLYDAKAYFN

>A9601_06011_UniProt_A2BQ26
MSKVEFNKETGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILEEKDLAGLADAHEELDRVVNDLIARRPEIKTLFLVGSCPSEVIKLDLATVAEKLNKRFLGQVRFVNYSGSGIETTFTQGEDGALKALIPLMESSNEEKLLLVGTLANNVEDRFKKIFKNLGISNIESFPPRQSTELPKIGKNTKVLLTQPYLSDTVRDLKHRGCEIISAPFPLGIEGSTEWFLAAAKAFKINELKVHEILSPLINRAKLALESHKEILKGKRLFLLPESQLEISLARFLHNECEMDLVEVGTPYLNKDLMKEEINLLPDNTKIVEGQHVEKQLDRVRESNPDLVVCGMGLANPLEAEGISTKWSIEMVFSPIHGIDQAADLAGLFSKPLRRNQILTTKTLVTH

>A9601_06021_UniProt_A2BQ27
MGTSQKKEPNVSGTEKELTPDQTLGLVSLSLMQKLSQKDPSFSWLEEDKIEKVNLKNLRDRLELTQLAINTGAPLTTSEVTALIGAKPGKSKLERAGLLATKIARNVWKLSKISQGNSFYRN

>A9601_06031_UniProt_A2BQ28
MEPTSSLNRGERKKGSSLVTGSEVQSQASGASCFITTDSEKSLVSRQASQVEQIELRTYVFLDSLQPQLAAYMGTVSRGFLPIPGDSCLWMEVSPGMAVHRVTDIALKASNVRLGQMIVERAFGSLALYHKDQSTVLHSGDVVLDAIGSEVRKRTKPSTSWTEVIRAITPDHAVLINRQNRSGSMIQSGMSMFILETEPAGYVLKAANEAEKASNITVVDVKAVGAFGRLTLAGKEGDVEEAAAAAIRAIDEISNY

>A9601_06041_UniProt_A2BQ29
MNLPVLTIASGNKTKVSEISAMLDVLSLRVQKQPEYLNVEETGDTYFENALLKAKAAALETKTWAIADDSGLEVDVLDGRPGIYSARYAKNNAEKIKKLINELSDSPYRSARFISCMVLCDPSGNLVKDTTGICWGEILKTPKYPNGEFESVFWVKEANCVYGELSQSQLSKLGSRGKAARIMSPYLKKEIGLN

>A9601_06051_UniProt_A2BQ30
MATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARPHREVEPALGNGEFLGQKD

>A9601_06061_UniProt_A2BQ31
MSKKYDAGVKEYRDTYWTPEYVPLDTDLLACFKCTGQEGVPREEVAAAVAAESSTGTWSTVWSELLTDLEFYKGRCYRIEDVPGDPEAFYAFIAYPLDLFEEGSITNVLTSLVGNVFGFKALRHLRLEDIRFPIAFIKTCGGPPNGIVVERDRLNKYGRPLLGCTIKPKLGLSGKNYGRVVYECLRGGLDLTKDDENINSQPFQRWRERFEFVAEAVKLAQQETGEVKGHYLNCTANTPEELYERAEFAKELDMPIIMHDYITGGFTANTGLANWCRKNGMLLHIHRAMHAVIDRHPKHGIHFRVLAKCLRLSGGDQLHTGTVVGKLEGDRQTTLGYIDNLRESFVPEDRSRGNFFDQDWGSMPGVFAVASGGIHVWHMPALLAIFGDDSCLQFGGGTHGHPWGSAAGAAANRVALEACVKARNAGREIEKESRDILMEAAKHSPELAIALETWKEIKFEFDTVDKLDVQG

>A9601_06071_UniProt_A2BQ32
MPFQSTVGDYQTVATLETFGFLPPMTQEEIYDQIAYIIAQGWSPVIEHVHPSGSMQTYWSYWKLPFFGEKDLNLVVSELEACHRAYPDHHVRIIGYDAYTQSQGTAFVVFQGR

>A9601_06081_UniProt_A2BQ33
MSKKTSREIALERRKAMSDSGKKAAAYSSTTQDRVRSSQDIQISGTQSSSNNQNITKPVTKHITKTQVSRKSSSTTLSSKELVIERRKAMSTHGKSAITSSDRTRTDVKKESPVNTVKTSTSKNQEVQNLHNTEVKTSKPSVKRRINQKRKPITNTSRDIVLARREAQSKHGKSATKQNNSAASLARRGDPDLSSREISQRVRELRSKTGATGKKGNGKCRPCGPNKNGAKQNIADASWKVSKSETDSGQIVTGTQANRSVKTTGNEASTCRTVTGTQYMGSEVVDQFCQDRPSYKQPLRSTVTSTTSGNKVTGNEVGRSEWVTGDEPGTCKNLTGTEYVSANQSQKYCGDVPKNPSKVKHSTTTDGLKVSGSLPGRSTLVTGDESGSGHQLTGDQYLGSEPNPKGKAFEKVGSYNTLNGNNVTGTGVGRSDHMTGNEHGSCKNVTGDEYIGSQQYEKFCGSKPKPEARKVGLSLSSKSNLISGTMTGRSKIVTGDEPGSCKVLTGTPYAGLDQINDNCSTEISEDMKSRSTVNSGNNSNARLTGQQPGIGGVMTGAKKGACKNLTGTPYVGGDQFSQACDNPPHDTAYANPEKSAGNSWSEFSVNSPSRDKYSEKNTQGVTGNEYENGSKVTGPFDMAVDKVTGTEKFRFEPNKNITYKQKMEIEEADRAAKTPEKRVASRITGEGQSVGNVTGDDWDRGDKVTGTEGASSRKRNPSRAGFMSAMPPMEVKRNEETEKPDFLITGSSGNTREGQLVTFSGGARG

>A9601_06091_UniProt_A2BQ34
MPLRGLAKAKNFTLGPTAPLKTFTENIHIQTKESNNFRNSGKSHKLTNNIQNENLFSYESKIKSDFDEIVPTLKEIARIQHHEDFINKAQKISRKNLGIDLPLHILDKSWVKPLDMRALYAWCAFKQHEKLSDNFFKNDPLEGASGSKDAEDFEKFLLDCGIHLLDITPCSDGRLAHSVAYVMRIPFSSVRRRSHAGALFDIENTVNRWVKTEHKRYRENVPNEAHKDTRYLKVVTYHFSSVDPLHQGCAAHGSNDELAAAEGRNKLYAFKEAVENSFCCGASVDLMLIGLDTDTDSLKIHLSTRDGGIDLEKTISTLEIYNSTINFSKEDAEREICQIISKQSSKDKLSGLEKFTYKLIANNISQIDYVKSFHNGSYEDIGHAERFIGVGIGFKEVHLRNLTYFAHLDTVEEGAPDLDVGVKIFTGLNVSQDLPIPVVIRFDYSGKVRGAKERAVNDCERVNNAISIRYKNLVDQGLLHTCSTIRDRDNIHSAQIIGMSLDKKTEEAH

>A9601_06101_UniProt_A2BQ35
MLICKVVKPLVSTNRIPGFEHKHLQVVLDGSSSKVAVDAVGCKPGDWVICVGSSAAREAAGSKSYPSDLTIVGIIDHWDPDKS

>A9601_06111_UniProt_A2BQ36
MEIMKVLGRMVCTQRVAGLGHMNLRILENNKGKKLVAVDPVGAREGNWVFTASGSAARFACPNPEVQTDLTIGGIIDYWESD

>A9601_06121_UniProt_A2BQ37
MWNQRESPLRIEKRFEFDQYSKISKFMGEIEKLCKKKDIYPNISFGKNFVSLSIFLDNKEISDKEKDFSKDIDKFYLED

>A9601_06131_UniProt_A2BQ38
MSAAKLNIDELEAGYPLFCKALRLLILKGNSVKDIEKTVCWGHLETLNRCLPGRYKAPTYLMALIKRDIDKPNNY

>A9601_06141_UniProt_A2BQ39
MSSKQVIKTSNAPDPVGPYNQAIKAGDFIYCSGQIAIDPALNEITCLGDIEKETIQVLKNLAEVLKAGGAKIEDVIKTTIYLTDLSNFQIVNKIYSDFFNIDNPPARACVEVSSLPKGVLIEIDCVAFLD

>A9601_06151_UniProt_A2BQ40
MEFNKARNIIGLRVLSDNVIWLMAKDKSVVVIDPSVHEPVIRYINENNFHLEAILQTHHHSDHIGGTKSLIEKWPNVKVIASSKEKKRIPFQNVSVEDGETLNILGEEVKIIEVLGHTSSHIAFFLNGENPVLFIGDTLFSGGCGRIFEGTYQQMYSSLERIKSLPKNTLIYCAHEYTKANILWALNLKPKDQDIKNKLSEVEKKLSLNELTIPFLLDEEMKINLFLRAKNLEEFTFLRANKDLWV

>A9601_06161_UniProt_A2BQ41
MITIALPKGALLKDSISTFKKAGLDFSNALEENNRSLTFESNCKRAKALLVRNGDVPVYVSYGQADLGIVGYDVLRESELKVAKLLDLGFGGCHMSLAVKKNSNYLKPTDLPANCKVASKFIKTARSYFEELNIPVEIVHLTGSVELGPITGMAEAIVDLVATGKTLKENGLIKIDDLYYSTARLIGNPLSMRLDDNHLRDTILSIESTNAL

>A9601_06171_UniProt_A2BQ42
MFFKDFRRIKKLGKYLTKDKKTIYLILIVLLPVSFSGAIQPLLVGQAITILKKETTDVWLSKTFFGQSINAIIVTLFITVLFRLVLQGYQTYNIQAVGQRLTARIRRELFDHSISLSLKYHDKMPVGKLLTRLTNDVDALAEVFGSGAVGVIADFVSLIVISLTMLSIDRGLAILLLLTQIPVSYFIIWLQKRYRRANYQVREELSQLNSDFQENLQGLEVVQMFRREAFNSKKFSKTGDAYKKAVNGTIFYDSSISAFIEWISLAAVSLVLAVGGYLVTSGNIGLGTLTTFILYSQRLFEPLRQLAERFTQIQGGLTAVERINELLDEEIQIKDSASAKHFLENAKNVNKKFKGKIEFKNVNFFYNEGEHIIKNLSFKINPGEHVAFVGPTGSGKTTIIRLLCRLYEPQSGQILIDDIDIKDIPIATLRNMLGVVLQDTFIFSGNVADNLKLNSNLDNFVLENLCYELGLDNLLKKLPEGLNTSLRERGGNLSSGERQLLSVARVAIRNPVVLIMDEATAFMDPSTEATLQKDLERILSKRTALVIAHRLATIESSDKILVLKGGSLVEEGTHSELRLKKGLYFQLSELQQKGFVNF

>A9601_06181_UniProt_A2BQ43
MIFRNQGSLIKKSNSISKDELIDLYGLNSYEFTQTTKEEIFVCSKNKDLDLIELDQLLQTVGWSRRPIRRVKRALDYSILVVGLWRHDDKFPRLVGFARCTGDGILEATVWDVAINPVYQGLGLGKEIMRYVLKELKNIGISKVTLFADAEVVSFYKRQGWILEPRGSKCAFWYAN

>A9601_06191_UniProt_A2BQ44
MSKISIIIPTINEASNLPLLLSDLSSIQEEGEIIIVDSGSEDKTIDIANIYGAKVFISKERNRGLQLDIGAKNSKGEWLIFLHADTRLTHDWFKKINSFLKGNKNIIYYFEFKINHKNIIYRVLEILVNIRSKFFKQPYGDQGLIIHRTIYFKNNGFRNIPLMEDVDFLMRLNKKKDLKQLNFPIFISSRKWERTNIFLQAIKNWHFRRRWLKGESLKSIYSDYYKK

>A9601_06201_UniProt_A2BQ45
MAKWHGFGRCKTRLSKDIGKSNSAKIQSVMTKHTISVAKFLQENKLLDISIAITGLGVGNCRKWSRELGIKKFNLQGKGCLGEKMKRQITINKKFCAKHKIKNIIFIGTDLPDLCHQDLLNTLKELQHNDLILGPSNDGGYWLIGLSEKIMLSHSYLPFINIKWGTENVLQNTIDNFASKKLKYKFLDKKIDIDTIIDIENRK

>A9601_06211_UniProt_A2BQ46
MQATNPIWAEVQQSLQKTLSKPSFETWIRPAKFNCFENGLLTLIAPNTFSSDWLRKNYCETIEKAAKEICGHDVKVVFKSETNTSSDLSNEDKANEKNVHHKTRSFSSNNQNNSSKNQFKNPNGLNLRYVFKRFVVGPNSRLAHAAALAVAESPGREFNPLFICGGVGLGKTHLMQAIGHYRVEIDPEAKVKYVSTETFTNDVISGIRRDGMTAIRDKYRNVDLILIDDIQFLEGKEYTQEEFFHTFNALHESGSQIVIASDRPPNQLSGIQERLISRFSMGMTADIQPPDLETRTAILQKKAEQERMSLPRDLIQFIAGRFTSNIRELEGAFTRAVAFASITGLPMTVQSIAPMLDPNSVGVVVTPKQVINKVSDFFKVSTDELISSSRRKPVSQARQIGMYLMRHGTDLSLPRIGDEFGGKDHTTVMYAIEQVEKKLSIDPNIASQVQKIRDLLQIDSRKNL

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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