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BMC type: CsomeACh


Organism: Roseivivax sediminis. Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

   SAMN04515678_106165 (fasta)
      SAMN04515678_106166 (fasta)
                     SAMN04515678_106167 (fasta)
                              SAMN04515678_106168 (fasta)
                                SAMN04515678_106169 (fasta)
                                            SAMN04515678_106170 (fasta) HMMreg00072_4_pdu1d FRAG2 (HMM details)
                                               SAMN04515678_106171 (fasta)
                                                        SAMN04515678_106172 (fasta)
                                                               SAMN04515678_106173 (fasta)
                                                                 SAMN04515678_106174 (fasta)
                                                                   SAMN04515678_106175 (fasta) H_greenApple CsomeACy (HMM details)
                                                                     SAMN04515678_106176 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                       SAMN04515678_106177 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                     SAMN04515678_106178 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)
                                                                                                        SAMN04515678_106179 (fasta) HMMcsoS2_1_ACy CsomeACh (HMM details)
                                                                                                           SAMN04515678_106180 (fasta) HMMrbcS_1_CsomeA CsomeACh (HMM details)
                                                                                                                        SAMN04515678_106181 (fasta) HMMrbcL_1_Csome CsomeACh (HMM details)
                                                                                                                                SAMN04515678_106182 (fasta) HMMreg00126_1_mix CsomeACh (HMM details)
                                                                                                                                     SAMN04515678_106183 (fasta)
                                                                                                                                         SAMN04515678_106184 (fasta)
                                                                                                                                                       SAMN04515678_106185 (fasta)
                                                                                                                                                            SAMN04515678_106186 (fasta)
                                                                                                                                                                  SAMN04515678_106187 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_greenApple

BMC-P(map on tree)

      2x P_neonPurple

(complete list of loci)

Protein sequences:

>SAMN04515678_106165_UniProt_A0A1I1XX25
MTTTESNQEVLEEIRSLLQGGLETEAFPRADTHDAVMAVISRLRVAGDDLKAKLVIGGFTPHPVEHGGIEQPCETCMYYLVHRRFCELPELSVPVEPEWSCRLWRI

>SAMN04515678_106166_UniProt_A0A1I1XX48
MNSEQQNATLRKMAQLMRDGLKTQTEPFPETEKEFAAILEELRRLDPGDLEGKMVISGFVDHPYGPDRQRCMECMYYLVHRQWCDLPELAVPVEADWWCRLWRI

>SAMN04515678_106167_UniProt_A0A1I1XVK4
MSAAVQTLDISPVGRVEGDLDVRVDIQNGVVVNAWTQAELFRGFEVILRDKDPQAGLVVTPRACGICGASHLTCAAWALDTAWETEVPRNAILARNLGQIAESLQSLPRHHYGLFMIDYTHKNYSHSKYYEEAVKRWSPFTGTNYELGVTISGRPVEIYALLGGQWPHSSFMVPGGVMCAPTLTDVTRAWSILEHYRRNWMEPVWLGCSLERYEEIRSYDDFMAWIDERPEHANSDLGMFWRMSQDIGVDSYGRGHGKFVSWGYLPHEDKYNKPTIDTRAASVRMKSGVYVGGTDKHEVMSENFTREDVMHAWYDEPSGKHPFDRVTKPVVKNPTDHNAKYSWSTAVRHEIDGRLEAGPLARQLIAGGYHGEGWQHTDPLVLDMYKKLGGASVALRHFARMHEGVKLYREAEHCLREFRLNDPWYIKPTERDGKGWGATEAIRGALCHWIEVQNGKIKNYQIIAPTTWNVGPRSDAGELGPIEQALIGTPVADASDPVEVGHVCRSYDSCLVCTVHAHDASTGKELSRFRTA

>SAMN04515678_106168_UniProt_A0A1I1XX97
MANLLWLQGGACSGNTMSFLNAEEPSACDLVTDFGINVLWHPSLGLELGENLQKMLLALTSGQMPLDIFVFEGTVVNAPNGTGEWNRFAGRPMRDWVTDLCKVANFVVAVGDCATWGGIPATAPNPTESEGLQFLKRDHGGYLGKDFKSKAGLPVINIPGCPAHPDWITQIVVAVATGRGGELSLDEFQRPKTFFTSFTQTGCTRNMHFAYKVSATEFGQRKGCLFYDLGCRGPMTHSPCNRILWNRQSSKTRAGMPCMGCTEPEFPFFDLAPGTVFKTQTVMGVPKDMPTGVDKTGYIKLTAAAKAASPRWAEEDIFVV

>SAMN04515678_106169_UniProt_A0A1I1XVQ3
MMDEKDGRDNDVIRFPQSRVTPGGGNPITVLGFGRMAGIFGVPERQTTGHWCSRCRGVWYGYVLEVDCPVCGNRHG

>SAMN04515678_106170_UniProt_A0A1I1XXC8
MTGSIGEALTAMGSLNVDLVVAEDRLDEMVGIDFLTRLRVSHPDIMRVYVTRSTARVSDQLLTQAAIYQFLLTPLDPTQLGLAIERALEARELARRHRILSREFKIQGDSYIFTEHKGPAFRPESHRFEKLVYASEKMAEMCNLARQAATTELPILIQGETGTGKELLARAIHYNSLRRSSPLLVQNCGGLPDELLQSELFGHQRGAFTGAISDRLGLFRAADGGTVFLDEISEVSPSFQVSLLRFLQEGEVKPLGSDKVIHCNVRIIAASNQSLKQLVERREFRQDLYFRLKGFEFEIPPLRDRPDDIAPLAEFFAAKHADSMGRKVLGITANAIEKLAAGDFPGNVRELENEIRRMVALAKDGEYVTARDMSPEFLAAAARKSSDGLRGFLPDGKTLKDQVESLEKQILGHALLRNHWNQSRTAVELGLSRVGLANKIKRYNLNELG

>SAMN04515678_106171_UniProt_A0A1I1XVY5
MREIENKKLLTIIAPGELQRMVVEQLKKRGIGGYTVVAASGAGTSGLRSGMLVSDSSVILYVIMSEERLREVLVDMDQFMSRGYRVKAFYQDISILPRKEAKPKSGEAVTD

>SAMN04515678_106172_UniProt_A0A1I1Y047
MIGSAASNLLDPAVLFFVLGAGIGLLRSNLEIPSALARFLTLYLLIALGLKGGAALSTGGLPAEGILAIGAAMGMATFVPAYAFYLLSRRIDPFDSAAIAATYGSVSAVTFITAQQFLTARDVDFGGYMTVAMVLMETPAIIMAVFLATMVRSRQAVAKAASAPEYDEAFEPLSTREVLREALTDGAQLVLIGSLVIGYLAGTEGKEELLPFTSGIFKGMLAFFLLEMGLLVGRQISEGRAKLDKALFAFSFLSPPVNAAIALVLAYMIGLQVGDAVLLAILASSASYIVVPAVVRYAIPEARPGVYFTMALGLTFPFNILIGIPLYFAAAEYVWP

>SAMN04515678_106173_UniProt_A0A1I1XVV5
MSGGYWEIPGGKIEPGETAEEAAGRELSEETGLSADGLRPVSRYRHRFASRSIDLKLFEAQTWSGTPVSQECQRLEWVYPGAPQVAPILDSNRKALRLLSLPRVVLCTEAPVDGPAAWALSCARRAREVSAGAVLFACRTLPAAQQIVLARRLGAELARQGTALWLDAAPGVAVRTGAELTTELAGDASLRGSGLIHAVIDPNDCSPSQTDVVLTRLDRRIALPTTGIATLVYAITSSDNIENAFRAGAYGVCICDD

>SAMN04515678_106174_UniProt_A0A1I1XW20
MNGMRIEPSKVPEHWTAVGKTGAVTRRFEFENYAATSVFLDRLATISEETGLFPDLGFATRYVNVTIPADPETGDTSLRNSFAERVNDMFEGQMT

>SAMN04515678_106175_UniProt_A0A1I1XW34
MASEKLGIALGMIETRGLVPAIEAADAMTKASEVRLIARQFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLAAAHIIARPHSEVENVLPTEATV

>SAMN04515678_106176_UniProt_A0A1I1XW27
MNIMRVIQDLVTTKRVLGLQERKLRVLEDASGNVEVAVDPIGCRVGDYVLTIAYSAARIAAGDPKVTTDLTIGGIIDDWNEDKWHGRDPVAT

>SAMN04515678_106177_UniProt_A0A1I1XXT0
MKIFQVEGTLVATARIDKLESRRLLVVRERGGSRSVAVDPVGCKVGDWVIAVGSSAAKDAAGHKDYPSDLTIVGIIDYWNTEEAGPGGAT

>SAMN04515678_106178_UniProt_A0A1I1XW56
MMAAIRTSSGPNKAWRTAWMTNAVSADRVPSQRTAPALVALATSHPFAEPGIAADLDLRETEIETGFARLAETLEAVAPQQFDPGFPERVVAKLAGLDIAADPAWFEADWRHPLDMSAVHARCVTRLFAQLVETGSERQRYACEDGEPVEMLIQRWGFHAVDITPCADGRLAGLLGAVLRIPLSIVTTRRSYAGSTFSVARSLRDWETVELGRWRTGHPNAADAPTRYLKIGVYHFSSLDPFHEGCAAHGSDTDAARDALHDRLRQFRAAVEARHGAGDAVALLLVGLDTDTDAIRVHVPGAAGEMQAYRFVDAAELHGQTREMGREAAKEAVRRVVADCAGVDAEDEATEGMRWFCGYLLKNNIAQVEAVLRRHNGPYPVKGHDEKLIVIGDPVDDVQLRNLAFQAQMQSVEEGASDLAVGVRILSGTSEGTVPVLALKVYDPEIPGDREACEVAARRMAYAVRSRLAEAPVVAEPALRSKSGGRIEFLDATSGGVSV

>SAMN04515678_106179_UniProt_A0A1I1Y1I1
MSTETKLEGLSGREASRKRRRMLSKGKAALPQASERVRTGFRDAALPVDQTSAPAPAPASQPQVAETPLSQIVPVWSGRQASMERHEALPQGKIGVKAARERIRCQSRDAERSGQAAPPASDTRTAATTAPAREMPEGGRAASVARRRALAQGKAALPRATERVRIGFRDAALPRDVSAGSAPVQPARSAAAPEMSSGRRPRQGSLQYPAKVLSVTTAVSQSTVTGLSHAAGRAVTGTEAGRDKPLTGTQYVAGEEGGYRPSLGKVGHARTPGGLTVSGTMVRSAVKITGDEDSAGARITGNADQTLADDLDGRGDSVLPVNAQFARKTQPHGHSVLGTKLGHSAHIVGSRSRETERPVEQTLSGHAVSGTAISRSVRVTGDESGAYRGLTGTQYLAPFGHQATQAPESGRANHATGTKVTASQTWGGQTVTGPQMEHNAHVTGSEHGTCQTLTGTPYYGASGAENWCDPEAAETESVLRGRCTPPAVTGDVPMHDPAVSGMHRGADRAITGSVYFVAAEAVRETDTDPVAQSITGFSVGSPQRMAHLAARAAEPQTPRRDQPAITGTFAQGEGKITGNVEFDARLRKSARGTAPARRAVTGEGAVSGAQITGSAWDDNPRVTGTEDYIAAGRNPSSSGEHARGFAGARRFKSDAPAREQTSRVTGAVGGAGSRAAVTLSGGATG

>SAMN04515678_106180_UniProt_A0A1I1XWK2
MAETLAYKPTQPRTETFSYLPPMTPERIAQQIAYCIAQGWNPAIEYTEPEKSFSSFWYLWKLPFFGTQSVDLVLSELEACRRANPGMHVRFIAYDNYAQSQGMAFVVFRA

>SAMN04515678_106181_UniProt_A0A1I1XWC8
MAEKTYTAGVKDYAKTYWTPDYIPLDSDLLAVFKVVPQAGVPREEAAAAVAAESSTGTWTTVWTDLLTDLEYYKGRAYGIEAVPGNPDAFFAFIAYPIDLFEEGSVVNVLTSLVGNVFGFKAVRSLRLEDIRFPIAYVKTCGGPPNGIQVERDRLNKYGRALLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFMRWQHRFEFVMEAVKKAEAETGERKGHYLNVTAATPEEMYKRAEFAKELGAPIIMHDFFTAGFTANTGLANWCRENGMLLHIHRAMHAVVDRNPMHGIHFRVLTKCLRLSGGDHLHSGTVVGKLEGDREATLGWIDQMREPFVPENRKRGLFFDQDWGAMPGVMPVASGGIHVWHMPALVAIFGDDSCLQFGGGTLGHPWGNAAGAHANRVALEACTEARNQGRQVEKEGREILTEAAKHCPELAIAMETWKEIKFDFDTVDKLDL

>SAMN04515678_106182_UniProt_A0A1I1Y1P1
MKIDLRQLEMLEAVARHRSLTLAAEELHVTQPAISIQLRKLEAELGIALTERAGRGIRLTEAGHEAVQHAQRIGQALEDMRENMRQYRGLVRGQLRIAVVSTANYFIPADIARFRKLHPAIEVNLKVANRDGILELIEANESDLAITGQPPDDSELVARRFKPNPLVVIAPPDHPLAGQFEVSPRELVAFPFVFREPGSGTRAAMERAFREHGLECRPSCVLSSNEAVKQAVQAGLGIAVISQQTTQLELETDRLIILPCKELSLTRQWFLVYRNFRRLPPSALEFRNQLLTEA

>SAMN04515678_106183_UniProt_A0A1I1Y0X1
MTDTTQGEPASSEAVARRCFLIQQAPIGSYIGAEGARILAEHASSEVCLKVNEYLLRKGEPNTSFFLIASGKLARVRENGRGDGKPQIVHVLQEGDLVGELSFIDGTPPTLSVMALGESTLVQFDSEDFQPLISEHPQLMFDFMRAVVKRVHHTLTDIATQQTALADYISSGGKGRQ

>SAMN04515678_106184_UniProt_A0A1I1XWJ2
MNVCAEPVCNTIFDYATGSCLVYGIGNAGRQDDGLGWAFVDWLESSGLCPGTEFVRHYQLMPEDADLISRKERVLFVDATKATDVDSVRVETVVPRFDLSFTSHALSVPTVVDTCRICFGRAPRAQLLTIRGYEWALKVGLTEAATRNLKAAKQLFVSRGIGHD

>SAMN04515678_106185_UniProt_A0A1I1XWU0
MMEDAIVSSSVKGRKLVIDPVTRVEGHGKVTVHLDAVNKVVGARLHVVEFRGFEKFVQGHPYWEAPMFLQRICGICFVSHHLCGAKALDDMIGVGYAGGKQITETAEKLRRLGHYGQQLQSHVTAYFYLIAPEMLFGIDGPPEQRNVLGLIEANAEMVRRVVALRKWGQEVIVAVLGKRMHGISSVPGGVNSNLDTAARDRLLNGTDDLIGVDTVIDYAQDALRLFYSYHEKNRDMIDNFAVVPALNMSLVDESGNVDYYHGRLRIVDRDKNIVDEMDYHDYLDVFSEATEEWSYMKFPYLKSLGREKGSVRVGPLARVNVTKSYGDDTPLAKAALERFHDYSGGKASDATLHTNWARAIEILHSAEQIRNLLRDPALQGSDLVLSPPEADWTGEGIGVVEAPRGTLLHHYRADREGKITFANMVVATTQNNQVMNRTIASVADAYLSGKETITEGMMNAIEVGIRAYDPCLSCATHAMGQMPLIVSVLDADGKVVDERVR

>SAMN04515678_106186_UniProt_A0A1I1XWP3
MNHHAKDYILSHDLPRSAMDPAVMAKRDEKLHVAMIGLCGCWGCTLSFLDMDENLLRLLDRITITRSSFTDVKRIPRRAAIGFIEGGVANEENIETLVHYRENCDVLISVGACAVWGGVPAMRNLVPLEDCLREAYVDSPTRPLQQPPTIPYHEDIPKLTTKVYPLHEVVKIDYFIPGCPPDGQTIFKVLDDLVHGRDFSIPAHINRFD

>SAMN04515678_106187_UniProt_A0A1I1XX75
MTAKLYIDGREICASEGDVLIDVAADYGIHIPSLCYMRGRPCLGTCRVCSVVVNGSIMPACTARIADGMVVEVAQPEVADMRRALVEANFSEGNHNCPSCEKSGRCELQAVAYEVEMVVSRFPYRFAERERDQTARHIFLERDRCIFCQRCVEFIRDIDTGHKIFAIHGRGTHARIDIDVVLADRMPPEQVREAADICPVGCIIEKGRGYNDPIGKRKFETRSIRDRVLEGDKK

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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