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BMC type: CsomeACh


Organism: Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

     Nwi_1963 (fasta)
            Nwi_1964 (fasta)
              Nwi_1965 (fasta)
               Nwi_1966 (fasta)
                 Nwi_1967 (fasta)
                     Nwi_1968 (fasta)
                            Nwi_1969 (fasta)
                              Nwi_1971 (fasta)
                                Nwi_1972 (fasta)
                                     Nwi_1973 (fasta)
                                         Nwi_1974 (fasta) Tdp_darkMagenta CsomeACh (HMM details)
                                                        Nwi_1975 (fasta)
                                                              Nwi_1976 (fasta)
                                                               Nwi_1977 (fasta)
                                                                   Nwi_1978 (fasta)
                                                                    Nwi_1979 (fasta)
                                                                      Nwi_1980 (fasta) H_hotpink CsomeACh (HMM details)
                                                                       Nwi_1981 (fasta) H_hotpink CsomeACh (HMM details)
                                                                        Nwi_1982 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                         Nwi_1983 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                   Nwi_1984 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)
                                                                                                     Nwi_1985 (fasta) HMMcsoS2_2_ACh CsomeACh (HMM details)
                                                                                                       Nwi_1986 (fasta) HMMrbcS_1_CsomeA CsomeACh (HMM details)
                                                                                                                Nwi_1987 (fasta) HMMrbcL_1_Csome CsomeACh (HMM details)
                                                                                                                      Nwi_1988 (fasta) HMMreg00126_1_mix CsomeACh (HMM details)
                                                                                                                        Nwi_1989 (fasta)
                                                                                                                                            Nwi_1990 (fasta)
                                                                                                                                                 Nwi_1991 (fasta)
                                                                                                                                                            Nwi_1992 (fasta)
                                                                                                                                                             Nwi_1993 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      2x H_hotpink

BMC-P(map on tree)

      2x P_neonPurple

BMC-Tdp(map on tree)

       Tdp_darkMagenta

(complete list of loci)

Protein sequences:

>Nwi_1963_UniProt_Q3SR68
MALPIISADQRLAEQRGVKGTIFGKSGIGKTSLLWTLDPATTLFIDLEAGDLAIEGWSGDSVRPRTWAECRDFAVFIGGPNPALRDDQVYSDAHYAAVCERFGDPAALDRYHTVFIDSITVAGRLCFQWCKGQPEAFSEKTGKPDVRGAYGLHGREMIAWLTHLQHTRAKCPSSDELRLFRGHGNGGSGSSGFEVRRPAGDAASVFGGWSGV

>Nwi_1964_UniProt_Q3SUW5
MRYPASEKAEIIRLVEASHLPARRTLDKLGIPRATFYRWYDRYLTGGIEALADHRSRPDRVWNRIPDPIRAEIVELALRETELSPRELAVRFTDEKRYFVSEASVYRLLKAHDLITSPAYIVIKAASEFKDKTTAPNQLWQTDFTYLKITGWGWYYLSTVLDDFSRFIVAWKLCATMRADDVTATLDLALAASGLDQITVAHRPRLLSDNGASYISAELATWLDGKGMKHVRGAPYHPQTQGKIERWHQTLKNRILLENYYLPGDLERQVAAFVEHYNHGRYHESIDNLTPADVYFGRGQTILTERERIKRQTIHQRRLQHHLQAA

>Nwi_1965_UniProt_Q3SUW6
MRQKSGPEKAPAEQVVKDIRRATRRQFSAEEKIRIVLEGVRGEESIAELCRREGIASSMYYGWSKEFLDAGKRRLAGDTARAATSDEVKELRREAQALKEAVADLTLENRLLKKSMLADGEDDT

>Nwi_1966_UniProt_Q3SR65
MPPRCREVLILHKFESLSYAQIADRLGIAKNSVAAHMVKAISHLRSRFREASA

>Nwi_1967_UniProt_Q3SVE2
MGRAYSNDLRERVVRAVVKGGLSRHQAAAQFGVGISTAINWVQRFHETGSVAPSQIGGYRPKKIAGPHREWLLQRCRKDFTVRGLVAELAERGLKVDYRTMWEFVHAVKLSYKKRR

>Nwi_1968_UniProt_Q3SVR1
MGVRSRCEAQLQKKTLIAAEQDRPDVARRRAQWTKYRDRIDPTRLVFIDETWTKTNMAPLRGWAPRGQRIRAKVPHGRWQTMTFMAALRHDRITAPWFIEGPINGEAFLLYIEKVLVPTLRHGDIVIMDNLGSHKASAVRRVIRAAGARLFYLPKYSPDLNPIEQFFAKFKHWLRKAAQRTTEAVYNAIAPILETVAPAECANYFVNAGYNQI

>Nwi_1969_UniProt_Q3SR62
MEQNGTQSVDDQAVQWFVLLRDEDATAEDRRAFAHWLAFDQTHETAWQSVERMWGGLDALAPEVVRQRRKPRRNSRLKRGAAVALLLAAIGIGWQMAPTGLFADYRTAIGERRMIVLQDGSQVDLGAASALDVSFGTGERRVRLLTGEAFFTVTKDAARPFIVAAENGEVKVLGTAFDVKIADGVAVAVAHNAVQVSAQASTQAPDRPDVVPDAPVVVRQGQIVRYDFAGISAVGAADLESIQAWRHGQLVFRDVPLDTVLTELQRYRFGRIVLIGGTLGQRRVTAVFDAAKTEQALDTIAESLSLRIYRAAGLLTVIIPNDSAEKLPRATNYFSRSCRLQNRDGIAPSWPIPCPHVEDGGRPITRWASRANCWTSA

>Nwi_1971_UniProt_Q3SR61
MRRGRMERAGGTGAIGQALLVGASWKRGPARGGVRNTKWRSGLDAAVLFPVRDRHPDGPKPQLAGSVEAATDAGIEPGALRCGQPHIDDVKIAAGSAPHLARTPQLVTATDRHDVVGNRREIATSVQFAARPAGYLPPAIEPVSRPR

>Nwi_1972_UniProt_Q3SR60
MSRGFGAIQRAVLDALSDKLIITLSTLDLAHIVNGGVRSRSMIASVHRALRTLEAAGKVVRLDGRWALASRQREARSYRYRQQPESPVQQRNERLKLISKILGMLGSSQDGEVLAAAKRAEAKRVELGLSWDDIILGDSCSII

>Nwi_1973_UniProt_Q3SR59
MEIDSIAKKLLFSTVRVDTELEDGSAGSGTAFILSHAHAKGNTPFIVTNRHLVEGVRRGGLVFTQTSEGRPAFGQRFQLNIDDFPAAWFLHPDPAVDLAIVPLRPLERAARDLGVQLYYHAIDSQRIPDAAAVRGFDALEDVLFVGYPSGVWDQVNLMPILRRGTTATPLELDFEGHKQFLIDAAVYPGSSGSPVFVVRDDPLRPRGDAARTIWFAGVVAEVFFREEANQLVPGPVPAQNDNRLIGSEMIDLGLVIKSESVRELIDAYVRKWLSD

>Nwi_1974_UniProt_Q3SR58
MKITLRTYVFMDALQPQLASYIATSSQGFLPVPGDACMWIEVAPGMAVHNLSDIALKKTNVRMGEQVVERAFGSMELHFRNQSEVLAAGELILRQLNTTMDSRLRCKIAWNEIIRAITPDHATLINRQLRKGSMILPGKSMFILEVEPAGYIMYAANEAEKAAHITLVDVKAFGSFGRLTMMGNEAEAEEAQRAAVAAIERLNQRAMAHA

>Nwi_1975_UniProt_Q3SR57
MAIHLHEFQELLDELPGRAQELLRASWNEAARAISPRGLSNYIKGAVALHELGRGEDLVVSFIQSMPEVGRAIGEEVLPDLVNFLLGMASKTSGQVLALIASTAPLAAHRVGDAELFRQYLNVLEIMLAQAPRGLRPMLENLDRLLSQLTLGGLRRWVQWGAQAYKADFEGQAAYFGLQSADAMAVLQQERKGTLFVDIQRRLNIYMRAIWGRDFFLRPTAGDYESREGLKPYIEHYVIHVADAYDDYKPEGDATALERIVSALELYRAAVNHCAAHLVFTQTPLSMQQLLPVQMALIELFEDARVEELAIRKFPGMRQAWLALHPVFDYSAQPRTVGELFDRLARALLDPDSTDPDPFVREGVAAFRAQSDLESNQVSWNLGVDLSHRLFELDLPTYNKVTDALSAVYRDDNRAVWFLEEYDEAQVMAATWETRQQVRKKVNVMEMVNEVDVEFAGDDAQEVWELPTEFYLDQENVSINSLEGRPPISEPFHYPEWDYQIQLERPNWVTLLEYHPVMGELDVIEGIILEHKPVISRLKFLIESMVPQGMQRIRNVEDGDEIDINAAVRAMIDIRIGQQHDPRIMMRYKRALRDLAVLVLLDMSESSNDKVRGHDYTVMDLTRAATVLLAGALHRIGDPFAIHGFCSDGRHDVHYHRFKDFDQPYDDVVKARLAGMKGRLSTRMGAALRHAAHYLALQPSSKRVVFVVTDGEPADNDVTDPQYLRHDTKAAVEELGRQGITVYALSLDPHADQYVSRIFGMKNFTVIDQAERLPEKLPMLYMSLTR

>Nwi_1976_UniProt_Q3SR56
MRDDLTNRGYLPRRNPAFHVPAAASARSEAAPRAVTDTTGAASPLDAYRVAKEPYYRAVADEIALYEAAYSVRMPMMLKGPTGCGKTRFVEYMAWKLGKPLVTVACNEDMTASDLVGRFLLDANGTRWQDGPLTMAARFGGICYLDEVVEARQDTTVVIHSLTDARRVLPLEKKGEIVEAHPDFQVVISYNPGYQSLMKDLKQSTKQRFGALDFNYPEHEVEAEIVVHESGVGLDAAKKLVHIAEHARNLKGHGLDEGISTRMLIYAGSLISRGVAPLAACRVALVRPITDDPDMRNALDSAVTTYF

>Nwi_1977_UniProt_Q3SR55
MTSIKDKLASSVRQAKTGAESAPAEKAEVRSKKPRPDSGASKPAAAKPAPKEKETLADEPPESVQELFPDRIWPD

>Nwi_1978_UniProt_Q3SR54
MSGPLVIAVINQKGGAGKTTVAMHLGAGLARRASAVVVDLDPQGSATQWAAAGTQTFPATVKHLRVGAGAVDLRRDFRAYPFVVLDCPPAVDSRAAALALQSCDVAVIPVLPSPMDLWASLRLPQDIDEARRNNPRLRAYLLPNQIETRSALSAAMQEALAEFGLPVLRTAVRRRGIYKTAALEGVSAYQLGARGQSAVAEIEGLIEEILA

>Nwi_1979_UniProt_Q3SR53
MNDDFQGWERRDKPPTLFRRFAFAQYAQTRAFLDALSALSEEIQRHPQNINFGTTYVNITIGAVDDTALSAEDEQFAGRIAALAERGE

>Nwi_1980_UniProt_Q3SR52
MATHVNGIALGMIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVEGILPTKPDSNGGGRDAETTSTRS

>Nwi_1981_UniProt_Q3SR51
MAEIMGIALGMIETRGLVPAIEAADAMTKAAEVRLISRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVEGILPKTPSA

>Nwi_1982_UniProt_Q3SR50
MMEVWRVVDELVCTRRVPEMGSASLRILKGQKGDISVATDPVGAPPGKWVFTAAGTAARMAMPDRTVATDLAICGIIDGWEEEG

>Nwi_1983_UniProt_Q3SR49
MKIMRVRTTLVSTNRIDAMGHRPLLVVQETPNGPRSVAVDAVGCIPGDWVICVGSSAARDAAGAKDYPSDLTIVGIIDHWNPEVS

>Nwi_1984_UniProt_Q3SR48
MNTRKRLQALRREANPVAAAAPQVVAILDHPACMIGSGQSCEHALVDRDLNRLLFDYERTVRSRFTRIVDVLKRISTHQHDENFIERAQQLAREQLGFELPPQVLEDAWVCGLDLSALHSRCIFSALKSSVENAPAEQVGWRQRLPLDENFLHSCGYHTVDISPCSDGRLQGVSPYVLRILPGPNVRVKAYAGALFDIEVDVSDWARREVERLAGAMVDGERLNYLKIAVYHFSSSSPGGQGCAAHGSNDRQATEAALQRLQNELRTAIDQTFGLGAAPDVLLIGVDTDLDALRIHLPDGFGELNAHRYFETAQVYRDTLGLAPEAARARIAGIVADAEGMGGWGQGNGRMHEGMRRLVLALAEANLSQIEYVIKHHTGRYKIIGHDEECIVAGDAVRSLQLRNLFYFARLDTIEEGAPDMDVGIKIFGNLNVAHGLPVPVLVHFEYDARIPESRARAIARGRRVRDAIEARYPDLAARGLLNCAIAVSERFGDESCVFVVDDAVDDH

>Nwi_1985_UniProt_Q3SR47
MTNVAPGHATATLSGRELALQRRQAMARHGKAGVALAQADKRSASGRMQLNAVHVASATRSDASAASMATSAPAAIIQPAAPKSASRARRQALSTVGKAALKNAGQGVASRPAAHVRPRRAAHAEVPNSDCGCGCGGQCSCGGQCGCGQGAQRKEAAQIEAARIDTPAAARPAVSSPEASGRALAKMRRAALTQDGKKGLKRVAQATRIAASMPAQDWQSAMLKGATGRQVAMQHRMVRALAGRVDKASGAGTRPTGRIRARNVVEVPAKVEEGHTLSGQTVTGTQVERISKVTGNEPGSCRAITGTEYIGFEQFQTLCGVRPEPTAPKVAVSSTLREQRITGTALGRSTRTTGDEAGACRPVTGTEYLSAERFEQFCSARPDARPEKVALTRTDKGKTVTGALVDRPRRVTGVEHGADRAITGTRYSQGETDDAPPKVAVTHTAAGKPVTGTVVGRSERQTGDEAGSCRPITGTEYHTVEQFRDFCRTPPPGGGPRKVSVMSTRDEQVVSGTAVDRSAKVTGNEVGSCRSITGSQYYTTADFAGLCKTPSPRKVSEMQTLRGRTVTGSEVAPSPKLSGDESYGCEPVTGTDYIGTRQLAAVCPVEAAPAVSPVSKVVVDTTLRGQTITGIAAGRAEHVTGNEAGTCSPISGTPYIGQGQYTGFCQAPQREQQAARVRDSAVIPSTVVTGDRPGAGGSQVTGDERGACEPISGTPYLGLDNISTGQCAMSDRFRARDADQRPPAPRDFSIDIPARQAARERQTEVITGNGLSSSRITGPINKADGLITGTPEFRHGGQSRRPRDEEHSLPAARRLSGEGSQQGRRVSGDAWDGNSRVTGTEGSSSLARNPSMRGQPRGAGMSAMAFRGVERPEVPESVITGSAGNTRRGATVTVSGGARG

>Nwi_1986_UniProt_Q3SR46
MAVQAYRSLKKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVEHTEKGTPAKASYWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQSQGMAFVVYR

>Nwi_1987_UniProt_Q3SR45
MAVKSYQAGVTQYRQSYWQPDYMPLDTDILACFKITPQPGVDREEAAAAVAAESSCGTWTTVWTDLLTDLDYYKGRAYRLEDVPGDDTCYYAFIAYPIDLFEEGSVVNVFTSLVGNVFGFKAVRALRLEDLRFPIAYVKTCGGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRACYEALRGGLDFTKDDENINSQPFMRWRDRFDFVMEAVQKAEQETGERKGHYLNVTAPTPEEMYKRAEYAKEIRAPIIMHDYLAGGLCANAGLANWCRNNGMLLHIHRAMHAVIDRNPHHGIHFRVLTKILRLSGGDHLHTGTVVGKLEGDRASTLGWIDLLRESFVPEDRSRGIFFDQDWGSMPGGFAVASGGIHVWHMPALVTIFGDDSVLQFGGGTLGHPWGNAAGAHANRVALEACVQARGEGRHLEKEGKDILTAAAAHSPELKIAMETWKEIKFEFETMDKLAIANK

>Nwi_1988_UniProt_Q3SR44
MHLTLRQLQIFDAVLQQESFTRAADALHLTQPAVSMQMRQLEEQIGVPLFDHVGKKIRPTDAGRELHRHTTLIGAKMRDLESAMEEFRGVHRGELDLTVASTANYFMPKLIAAFCACHARVQVRLQVSNQTHILETLSATNQDLAIMGQPPEDSELVARAFLDNPLMVIASPEHPLAGRRKIPLTELGCQPFITREPGSGTRNAAERHFSRLGVEFHSVMEMSSNEAIKQAVEAGLGLGILSLHTLELELAIRRLVTLDVESFPIVRQWFVVHRKGKRLSAVAQSFLTFITQQARPLASPKHPQQAPLLIP

>Nwi_1989_UniProt_Q3SR43
MNEIKLHPLKKLEIILQGEHREFATDLLDRAGVKGYTIIGNLSGKGAHGMYEGHLMFNEDDVLIMIIAAVPPSLFDSLLEGFLPFFEAHSGVILVSDIQVGRLVKFMG

>Nwi_1990_UniProt_Q3SR42
MVDALNLGRRLRVRSTAYVAGEPVPFFWPMRTFIHHNPLYGLEDMPFEQAVRRGAELFHARMFLPRSDYQRWQREGKVRPETLKEEIGRRSQDLPPVPGVDWPRWLHALMQTPHDRDAVVRGVRAKDVHAALHGHPPSAQAVDVAALLPELEQRLHARTLPEAVDALWGTGLADELDELVIKNCLDFFDEDQSAWRMPGRERGLFSAWSEVTRRNARMVLRRLHVRHILDHVQDAESAVVYVMEEMGIGAEAWPTYFTRVLTRLHGWTGFVRWRASAKHYYWAQQYPADIVDLLAIRLVMGLALLQESARHRGTPMRRDDLGAVVRERGAECVLRYALHSGEVLPDWAQRIDDTLSRGNGARCHDLLQRYWPLWQARLGQQQAAALRELAAAANATAALDALAPEDVEGLLQGLRDFAPQEGMVWTLAMEGQAIDKLLTQVQAPQDPPPDKIPFAQAWFCIDVRAEPIRRHLERVGNYQTFGIAGFFGVPVGFLGYGKGSESHYCPAVITPKNLVLELPAALDPHNEDFVSTLGHVLHDLKKSVLSPYVTVEAVGMLFGLDLFGKTLAPLGYSRWRRRIDTEKPVTRLLVDKLSREQADSIIRTLQRAMIVKALHTELKIERERVDDDMIRELREIALRRRDGPTRLRTTFGVPQTQEAEFIDKLRQVYGVDADYTNHQLERLGRIGYSLDEQVNYVHTALTMIGLTQTFSRFVLVVGHGGKTENNPYESALDCGACGGASGIVNARVFAQMANKPAVRERLAAMGITIPEDTWFMPALHVTTTDAIELFDLDLLPPRHLVYLERLRDGLRAASRLTAAERMPKLLPEAKALEPAEALRLANRLAVDWAQVRPEWGLSGNVYGIVGRRALTENSDLQGSAFLLSYDWRCDPRGRLLENLLAAPVVVGQWINLEHFFSTVDNAHLGSGSKVYHNVSGRFGVMTGSLSDLRTGLPMQTVMREGRPYHEPMRLIALIEAPLDFAGRVLERVVKVKSLVLGGWIRAIVIDPTQGYKPFVFNNGQWEERTPLIAPAEKEYSA

>Nwi_1991_UniProt_Q3SR41
MIALLLALILLPLFPLSMLFNAGLQVLPVWLRVPALVAFPAAGAWLLNQAAPPPEQYVLPLQLLAAFTALLYAWRLLSVQEVFIWARLQATSVWPLVWLAWLHGLHGKTLVFVALAMTIPAAVLMILGSSLSSRFGGAYLGLRGRIGPAFPRLTLAWVVTLLAALAAPPFPGFFAMLAVLQQIPVGLTVVVLAVWLLWSWAAALLWQHGLFGREWPRPAGTVDLSYGAGLGLMLTAVAAVLASIGGWSWWMH

>Nwi_1992_UniProt_Q3SR40
MDQWVSWCLVVLPALPVLSAIMAPLAGSGQQARAARLSVAMTAVTCVVSVALLVAVLRAPQGDVTVARLGPAALMLDNLAVAMAVLVSAISLVVHVYSVRYMADEPGYVRFFAMLDLMTAVILLMVTAADLLTLLAAWFLIGVLLFFLLGFDTSRKASGRYALWTFLTYRVGDLPMVGAALLLWHGYGTAELSELFARITANPDVQLGGVAVVPLVAMLLALAAFARSAQFLLHTWLPYTMDGPTPVSALMHAGIVNAGGFLFNRFAPVFVHAPDALHLAFVVGLVTALIGSALMLTQNDVKKSLGYSTMGQMGFMIMECGLGAFSLAVYHLIAHGLFKATLFLNAGNVIGDSRREDGVPPDDIYSFVVERRPLREVQKVPWLWAALATVLVPALVLGLSHGMVAADFFHKQGSVVLLFFGWVTGAQLFFSIHKMPSESPLRTLTMVLLSFFIVVVGYTLIAHTFENFLYPDAELRDAIYAAASINVLAFDTLVVLVTVALVGSWLATFYTHSLEFGGKPGTRWNAIYLNLYALFSREFYVSYIYTQLARGTLSATKRVNIWLRWV

>Nwi_1993_UniProt_Q3SR39
MAKYVGLDQDTHGITALGRTVLDARVFGLIPETQDCAGWDAGQMQALMSKVNNLWDQYGNVPSALPPELADRHNRVYSEAIARAKARGWDAELDDND

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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