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BMC type: CsomeACh


Organism: mine drainage metagenome. unclassified sequences; metagenomes; ecological metagenomes.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

          GALL_250950 (fasta)
                 GALL_250960 (fasta)
                       GALL_250970 (fasta)
                              GALL_250980 (fasta)
                                                   GALL_250990 (fasta)
                                                          GALL_251000 (fasta)
                                                            GALL_251010 (fasta)
                                                                 GALL_251020 (fasta)
                                                                   GALL_251030 (fasta)
                                                                       GALL_251040 (fasta)
                                                                         GALL_251050 (fasta) H_hotpink CsomeACh (HMM details)
                                                                           GALL_251060 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                             GALL_251070 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                           GALL_251080 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)
                                                                                                           GALL_251090 (fasta) HMMcsoS2_2_ACh CsomeACh (HMM details)
                                                                                                              GALL_251100 (fasta) HMMrbcS_1_CsomeA CsomeACh (HMM details)
                                                                                                                      GALL_251110 (fasta) HMMrbcL_1_Csome CsomeACh (HMM details)
                                                                                                                               GALL_251120 (fasta)
                                                                                                                                  GALL_251130 (fasta)
                                                                                                                                             GALL_251140 (fasta)
                                                                                                                                              GALL_251150 (fasta)
                                                                                                                                                            GALL_251160 (fasta)
                                                                                                                                                                 GALL_251170 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_hotpink

BMC-P(map on tree)

      2x P_neonPurple

(complete list of loci)

Protein sequences:

>GALL_250950_UniProt_A0A1J5RLV5
MKQPKESLQKSIVDQRELLTRLLYEPLHKLADACSRVWGDRAKMEAILNEAFPSVPYCKFLYVLDMNAVQITSNISRDGLVVEHFGRDRSDRPYMREALLATGFFDKNREQHYQQWPYIRGAVPATDFILCEAYISLRAQRPSLTAIQFVRNVDGIVLGFIGADFALRDLPQTHKIYEEPRYWRQFDGDPSIRGTVFNQTRLESKMDRYLDTVISIVEELILDHGIYHVILHFSSSQAIIWVTDDPYRYRLLDMDALIDPDSCMAYPKRPYPVDALVPAQQIRAVLDNWRALRYIDEMFYLRSGALNVFNGMVGLTFSCDGSHYIPYDEFLKMDQTFWVSG

>GALL_250960_UniProt_A0A1J5RA82
MNTDLFITGTDTDVGKTLVTGALLHAYARQGKKVVGMKPVAAGCEAIPGGLRCGDVVQLQANSNVAAPLNLVNPYSFAPPIAPHIAAVQSGAEIDLDHIVSCFQALRKMADVVLVEGAGGLMVPLNARQDIADLAAMLDLPVILVVGIRLGCINHALLTVQAIRQKNLRLAAWVANQIDPGMQSFDENVQALEARLNVPLLGIVPYLTNVSQDNVSAYFNLDII

>GALL_250970_UniProt_A0A1J5RAY1
MRGVELPGLRGPFPRFCALRAQVCFSGPFVAGALFRHLFSRVLRPGRSRPRVCRLRKHADGASAVYRPFTRRSHRPCRTRAAQPGLTSGFARLVLVANHGGQSANNSHAVCLDCRACCGQAGEVNTRALAALLNDGAVRAGLTARGAHIPPETWFVAALHNTTTDDVRLFDTGACRRSRTDHVLVAGRECTARGERAPVRREPVAVVVATRRCLQHTAALRRYTHPG

>GALL_250980_UniProt_A0A1J5RCA9
MPTRILLVRHGATALTAEDRFAGSSDVPLSDEGRMQIASLAERLAGVPVVAVYASPLQRTMETARILSEPHALQIQSESALREIDYGRWEGLTRNQVEEHYADEYAMWEEDPLIIAPEGGESGINVVNRVLPVMRRIVGRHRHQTVLVVSHKGTNRLLVSSLLGFDMRSYRERLDQSPAALTILDFMNEVRPRLRLFNDVSHYEDYPQRVLAERLSKWWRPTLGVWAERRSDSLERDASDFTNEPAQCLPAPAGRISIRNPSSRIATGMGLSGSCRCLQ

>GALL_250990_UniProt_A0A1J5RU32
MAVELEKYQDILDELGEHAGEVLRASWDEAARVFSPRGLENYYLQGATGLKSLGRGTDLVVSFIQSAPAVARELGEDAVSELLAAAIKMYSKTSATVIAAIFSTSPVAAARLGDSGLFRGYLHLLDTLLAQAPRGVRPMLDHLSTLLGQLTLGGLRRWALWGAQAHKTNFDGQLKYFSLESPESISVLQRERKGTLFIDVQRRIGMYLRALWGRDFFMRPTSGDFEQREGYRPSIDGYIMHLPDAYDDFVFVSPAGEETRIPGIELYRASAAHAACHQVYTTAQFDSTGLSSLQVALVGLIEDARVEGLALAQFPGLKQTWLPLHTATAQSGDTAAAQMARLARALLDENYHDDNPWVTLGCRLFSEHRAQTNVTEWVRDIGTRLADEMQALGVSYSQSNDVVDIPYRDDNRYMWEFEDIREAGRVIAGVTTQQIRKYVSVMEMINTLDVPGAGDDANEIWVLASEFFRDEETTSLNQQEGREPPPDPYHYPEWDYQMQLDRPDWCTVLEKRPKPGNVEVIDNIVVEHKPIVGRLKHLIEAMQPQGVQRLRKQEDGDEIDLNAAVRAMIEMRMGEQPDSRIMMRNVRKVRDLSVLLLIDLSESTNDTVLGSDNTVLQLAREATVLLADALDKIGDPFAIHGFDSNGRHDVEYFRYKDFGMAYNDKAKSRLAGMSGQLSTRMGAAMRHAGSILKRQPSNKKLLLVVTDGEPADNDVRDPQYLRFDAKKAVEELTRNGIATYCLSLDPRADQYVSRIFGAKNYMVVDHVQRLPEKLPLLYMGLTR

>GALL_251000_UniProt_A0A1J5RLJ6
MQTAIEQYLIRNTPYYRTVVDEVELYEAAYSVRMPMMLKGPTGCGKTRFIEYMAWKLGKPLITVACNEDMTASDLVGRFLLDASGTRWQDGPLAIAARFGAICYLDEVVEARQDTTVVIHPLTDARRVLPLEKKGELVQAHPDFQLVISYNPGYQSLMKDLKQSTKQRFGALDFNYPAHGIETEIVAHETGVSAEIAGKLVSIAERARNLKGHGLDEGISTRMLIYAGSLIAKGVEPMPACRVTLVRPITDDPDMRDALDAAVSTFF

>GALL_251010_UniProt_A0A1J5RXY1
MSVKKMGSKLAQGVRQVQSQQAKAQPPAADTSEPVAPAVTAPTKQTEAGSAAKPAAQRPAQQAVAGGERFPAPSFDDRKLHPRRIWPD

>GALL_251020_UniProt_A0A1J5RA99
MADRIIAIINRKGGAGKTTLALNLAAGLALRGSTHLVDADPQRSLSQWVGMASAGAGLPPVAQPGSDLFATIAQLARTHRYVVVDCPPVVQGDVVAAVLRSVHVALIPVLPSPIDLWASVDMASAVGEARRLNPGLRACLVLNQLETRNALSRAMREAVAEFNVPVLQAGMQRRAAYRSAAVEGVSIYGLGKRAENAVADMEAIIEEVLCL

>GALL_251030_UniProt_A0A1J5RLW4
MSDVNDSNAASRVPQERQLTLNWRFDFGSYAETRHFLDQVADLSKREDCYPNMSFGKTYVNISIDAEDQAALSERNSSFTGEMEALAAACKA

>GALL_251040_UniProt_A0A1J5RA89
MATDPRLTGYLARALSHEMAAVQQYLAQASLAAMWRLGEHSRRFRGDAEDELGHAQQLIERMLVLGIPSNGTQLPPIRPGRTLEEMLLIDRMLEIEAIRLYEEAAHYCARMRDGEMQALFAGLLQDELGHLRDLDRMLTEIHQGATS

>GALL_251050_UniProt_A0A1J5RAY9
MANVSGIALGMIETRGLVPAVEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHAEVESILPKTPDAGDS

>GALL_251060_UniProt_A0A1J5RCB7
MEIMEVVSDLVATRRVPGLKNSSLRMLADAKGRLSVASDPVGVPPGKWVITVSGSAARYAAGDYRILTDLTIAGIIDHWDAGGGQASE

>GALL_251070_UniProt_A0A1J5RU40
MKICQVEKTLVSTNRIKEMGHRPLLVVKEKGGSRSIAVDAVGCIPGDWVICVGSSAAREAAGSKDFPSDLTIVGIIDHWSED

>GALL_251080_UniProt_A0A1J5RLK4
MNTRNRPGRHTSPQSGASRPPYGLGTPAGLLQARPRQAVFAPQGIALDPGVAPNPACSTDPGRPCRHPLTNEVENQRLLVHELAVKGSFDAIVPVLKRIAGLQHEADFTERAQAIARAQLGFELPAQILVDAWVAGLDMRTLYGECVMRTLRLMAEQAQLSNPQQDTDEAVAFFLDCGYHAVDISPCSDGRLKGLVRYILRLPDGAVRSKKSYAGAMFDVDANVKRWIETELMRYREGRPVTADAGTRYLKVAVYHWSSSNPTHEGCAAHCSNVTAAAEAGLKRLNEFRQAIENSFCCGASVDTLLIGVDTDTDAIKVHVPDAAGETNLYRFIDNVELYRASVNDDASSARLKVYRAIQVASATTGWGAGNGDPHEGMRRLIASLLINNLSQIEYVCGNWGGRYADIGHAERFISVGDGFEEFQLRNLAYFAHLHTVEEGAPDMDVGIKIFSNLNVRRGLPVPVAIHFRYDSRVPGCRERTMERCRRVRAAIETRYAELSRPGLLVCAMTVQGKRPGSPIEPVEENGASAARGER

>GALL_251090_UniProt_A0A1J5RXY9
MAGLSGRDAARARREELCQQGRGDQAACRPSGRVRQKPANPTKVEQGTTLSGTTVTGTQVERSAKVTGVDAGSCRAITGTEYIGAEQYGELCAAIPEPAPAKVSVGSTSRGQRVSGAELGRSVKVTGDERGACKAVTGTEYLSAEKFETFCATKPVPAPAKVGVAATQAGQRVSGTEVGRSARVTGDEPGSCLKLTGSQYYQPEQFGSLCRGGNGAPHKVNVMNTLRERPLTGTEITPNARVTGVERGACASVTGTESAGLAQYQACNRKPVPAPEKVGVMRTWHEQPVSGTSVEHSPKVTGDEYGACQPVSGTEYVGPDQYAAFCGSDREAASRALMAHRSSGADSVAMTAIRPGQDSKVTGATCGKCQILSGTPYSDTDRLVRQRGGIAQASPHPLTRGPADTSRVAVAAPEVADVRGNFSVTTPARNAQGGELSRITGTAYGAAGRITGPVNLATGLVSGTPEFRYRDEAYDATPVAPDLEVPRSRLTGDGREGGFAITGAAWRRNESITGTEGNSTHRNPTLRGDQRGTVIGASQLKGRERPELPMSRITGSSGNDAKGSAITYSGGARG

>GALL_251100_UniProt_A0A1J5RAA5
MADIIQDYNSTPKYETFSYLPAMTPEKMRRQITYIINQGWNPGIEHVEPARAFNYYWYMWKLPMFGEQSGDTIITELEACHRAHPSHHVRLIGYDNYSQSQGSSFVVFRGR

>GALL_251110_UniProt_A0A1J5RLW9
MYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVQDAIENAQAETGERKGHYLNVTAPSPEEMYERAEFAKEISSPIIMHDYLTGGFCANTGLARWCRKNGMLLHIHRAMHAVIDRNPHHGIHFRVLTKALRLSGGDHLHSGTVVGKLEGDRHATLGWIDLMRESFIPEDRSRGIMFDQDWGSMPGVMPVASGGIHVWHMPALVNIFGDDSVLQFGGGTLGHPWGNAAGAAANRVALEACVEARNEGRELEREGKDILTNAAKDSPELKIAMETWKEIKFEFDTVDKLDVVNR

>GALL_251120_UniProt_A0A1J5RAR3
MDRTERFYMIDQLLGEQRVVPFAVLRERLGVSRATVKRDLEYLRNRLNAPIVWDREQGGYRFSEVERTGGQYELPGLWFSASEIHALLTMQHLLAGLDSGGLLGPHIQPLLVRLRSLLGSADNPSGEIQKRIRILGIAARRMDLDHFAVVGSSLLRRRRLQIAYFVRTRNEISEREVSPQRLVHYRENWYLDAWCHLRHELRSFSVDAIRSAEILDTVARNVSEKTLDEVLGSGYGIFSGRRVQWAKLRFSSQRSRWVASEQWHPQQRGSFDRDERYLLEIPYSNHRELLMDILKFGRDVEVLAPVKLWRAVCEELQASSQLYANRAT

>GALL_251130_UniProt_A0A1J5RC41
MSEHIHHVTDASFKNEVLESNLPVLVDYWAEWCGPCKMVAPILDEIAKDYTGKLKVAKLNIDDNQKTPGEFGIRGIPTLMLFKGGNVEATKVGALSKSQLTAFIDSNL

>GALL_251140_UniProt_A0A1J5RTV6
MHLSELKVLHVGQLLEMAIANEIDGANRLRKQELIFALLKNRAKKGESIFGDGALEVLPDGFGFLRSPDTSYLAGTDDIYISPSQIRRFNLHTGDTIEGEIRTPKDGERYFALVKVDKVNGEPPEASKHKILFENLTPLHPNKHMLLERDMRGEENTTSRVIDIIAPIGKGQRGLLVASPKSGKTVMMQHIAHAISVNHPDVVLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPATRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRVYPAINVNRSGTRREELLLKPDVLQKMWVLRKLLYNMDDMEAMEFLLDKIKATKNNAEFFDAMRRG

>GALL_251150_UniProt_A0A1J5RLC0
MKAAIHPNYVEIDVTCSCSNTFKTRSTTGRPLHIEVCSACHPFYTGKQKIVDTAGRVERFRQKYGTVQRSA

>GALL_251160_UniProt_A0A1J5RXN7
MPALPRFPVKLPLSGMALAILCGLYLLAGLTGHDPWKNDDAVNFGITYGFLTSSNWLVPHLAGEPMLGSLPLYYWLAAACARLFSWLLPLHDAARLASGLCGAIFLAFLASASRRLHGPEAGSAAVLVVIGCLGLLVPIHDMQPQVALLAASAAFYAGLAHLPQRPAMGGLQAGIGLGLGFLATGTNALITLAPVLLLLPVSRYWRSAASRRGLVVAIVIALPLIILWPLLLSRQAPTALVTWWLADRPYFQSHWLNHVPDQAELLLWFAWPALPLALWTLWLNRRRLSEPTLILPLAGTLTTLLALIFLYPPRPVEALPLLVPLTLLAAAGAGRMRRGAANAFDWFGMMTLTLVAALIWLGGIAMTFGIPPKVAHNFARLAPGFVAHGGITAFTSSALLTLAWVWQIFASPRSPWRAISHWASGVTLVWVLVIALWLPWIDYGKSYRGVADSLKRALPASGQCIAGRNLGGAQRASLQYFAGIVTVRANTRAGAACGLLLVQGSQKTRPPPAGWHKLWEGHRPGDRSERLRLYQRD

>GALL_251170_UniProt_A0A1J5RA30
MTEYAFFGVKIMAQDQNALVWLDMEMTGLNPDSDRIIEIAFVITDSRLNTIVEGPAWVVHQSDAVLDAMDDWNKGTHGRSGLITKVKASTLAEAEIEEQCLAFLKLYVPERASPMCGNSICQDRRFMARYMPRLEAYFHYRNLDVSTLKELCKRWKPELAKGVVKNGKHEALADINESIEEMKYYRDNFLRI

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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