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BMC type: CsomeACh


Organism: Ferrovum sp. Z-31. Bacteria; Proteobacteria; Betaproteobacteria; Ferrovales; Ferrovaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

           FEMY_02200 (fasta)
              FEMY_02210 (fasta)
                 FEMY_02220 (fasta)
                        FEMY_02230 (fasta)
                              FEMY_02240 (fasta)
                                                   FEMY_02250 (fasta)
                                                             FEMY_02260 (fasta) HMMrbcL_1_Csome CsomeACh (HMM details)
                                                               FEMY_02270 (fasta) HMMrbcS_1_CsomeA CsomeACh (HMM details)
                                                                              FEMY_02280 (fasta) HMMcsoS2_2_ACh CsomeACh (HMM details)
                                                                                          FEMY_02290 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)
                                                                                           FEMY_02300 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                             FEMY_02310 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                               FEMY_02320 (fasta) H_hotpink CsomeACh (HMM details)
                                                                                                 FEMY_02330 (fasta) H_hotpink CsomeACh (HMM details)
                                                                                                    FEMY_02340 (fasta)
                                                                                                      FEMY_02350 (fasta)
                                                                                                       FEMY_02360 (fasta)
                                                                                                             FEMY_02370 (fasta)
                                                                                                                              FEMY_02380 (fasta)
                                                                                                                                     FEMY_02390 (fasta)
                                                                                                                                             FEMY_02400 (fasta)
                                                                                                                                                    FEMY_02410 (fasta)
                                                                                                                                                           FEMY_02420 (fasta) HMMreg00126_1_mix CsomeACh (HMM details)
                                                                                                                                                                 FEMY_02430 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      2x H_hotpink

BMC-P(map on tree)

      2x P_neonPurple

(complete list of loci)

Protein sequences:

>FEMY_02200_UniProt_A0A149W119
MKVQLQLKQTTQLSLTPQLQQSIRLLQLSTQELEQEVEEFLRLNPLLERADGKDGAVDSEPGAFETADHIETAEPTSSAEIEQESWNFEEGSGIGLGGQGEDEDEGIQDLRVIPLSLRDHLLGQVRLMPLEERDQELVATLIDYLDEDGYLRHSFIDLNSSVSDALGEVEESEWLVALRILQSLDPAGIGARTLSECLELQLLASHATEEDKRLGKKLLDHLEWLAQREYTRLKRALGIEERKVRELQQMLLHFDPRPGAAFSTAETRYVVPDVIVRRTERGWSVSLNEGVMPRLRVNQVYANILKKGVPGHSMSQQLQEARWLIKNIQQRFDTILRVACAVVERQKDFLERGEVGMKPLVLREIAEVLGLHESTISRVTVQKYLLTPRGLFELKYFFSSHVGTDSGEAASSTAVRALIRQLINQEDIKSPLSDQRIANLLGERGFQVARRTVAKYREAMHLPAASLRKSL

>FEMY_02210_UniProt_A0A149W221
MKVTITGQHIEVTPAIRDHVEEKIGRIKRHFEHPLDINVVLTVEKLKHNAEANVHVNGKDFFVHTSQEDMYEAIDDLAHLLDRQIIKHKERQSDQRHGQPLKHLANGV

>FEMY_02220_UniProt_A0A149W123
MGSVVPRLYQLLKPDHIVLDLEVTSKKRLFEQIGILFENHDQLSRSQVFDALFNREKLGSTGLGHGFALPHGRMKGVRDTFAAFLRLSTEIPFEAPDGQPVRMAFVLLVPEHANEVHLRLLGEISELFSDESLRQHLLSVTDPLAVIQALSQPHAFG

>FEMY_02230_UniProt_A0A149W140
MPSVSVQRLFTDNRERLDLCWLAGQQGSLRVVTVGALSDSTAGLIAHLNLTHPHRFQVLGAHEMAYLQSLDEGALATAWEGIFSSELVAIFLSEGCVLLPALAERAEQRSIPVMGASVDSTSVINQIRHYLSQELAEQESLHGVFMVILEVGVLITGDSGAGKSELALELITRGNGLVADDVVEFYRITPDTLQGRCPPLLRDFLEVRGLGLLNIRSIFGETAVRPRKNLKLIVHLERPSSGDLNTCERLPMGRQTQSILGVAIPRVVLPVAVGRNLAVLVEAATRNFILEQRGINSTQEFIDRQQQFMQESCAQGDSHEF

>FEMY_02240_UniProt_A0A149W134
MNFSEPGVVTSKVVLISGLSGSGKSVALRALEDAGYFAMDNFPLSFLVFVLQELVARGERQIALTLDVRGGNALNNLPEALHTLRDNGLDVRLLYLEASDQDLIRRFSETRRPHPLALHQHSLAECIALERNLLSGVADLARRFDTTHITPNTLRAWVRDFVDLDPARLTLFFQSFGFKFGIPLDADFVFDLRCIPNPFYDPHLRPLTGQDPAVIKFLENLPIAQRMFTDLQTFVTSWMPDFIKDNRAALTVSLGCTGGQHRSVYFAEKLTRYFSQYQCTRVIHRELDREGGDKRKAVSNPL

>FEMY_02250_UniProt_A0A149W150
MKEAIQRARDVRIMVGLILTAWILSFMMLINWMNESRSQNQEEIKTRVSRLLALEELTEEGQVSFQREIHEWKNILLRQYDPTLRQKCLTDFTQAQQTTQELLDAAQILAQEEQIPEVAEFLQISISHRALYLSYRTALSHLNAHDPLSFRSVDKQVRGLDRPLANSLQKLAGQISEYASHQVDELDRSGNGENHWWHIWGKYFVSLELLIILAFMRLIQLAQSTELKGRRAAVIVDSIDDAIIVTDSECRIRFVNRAAEVLLECSQEKLKKISFQKQVQMTDEHLAPVPDLLLQVIQNRQRASSGAVHLLHTPAGAIIPVESRAAPILTENNQLDGVVTLLHDMTMHQKLTRQIQTQSFRFQLVFEQTGIGIAFCEPHSTKILEANQRMAHILGAQTPELILGRRFTEFYADVLHANTPSGHNAILKGLEHMILEARGSDVQLRDLTGQQLRWYHQTVAFLHDSEHHVPSQLVFVFWDIDDRVQLQTRLEIQGSRDQLTGLGNRFLFQCAIENALTRRMPSGQINSFCILLIDLDNFKAINDVRGHSVGDSLLKEVALRLTQTVRDYDTVARLGGDEFVILLHHSQENSATAVADKICHAIAQEFLLEGLRLHTSCSIGISTFPDHGLEYDVLLRRADMAMYQAKSLGKNHFSLFSDALEREGMEYWQLETELREALERKEFELYFQPKINLATGAVCGAEALIRWNHPVRGLLTPDMFITYAERSDLIIGIGNWVIHEVCRLLHQWDLMGVPPMEISFNASPRQLLESDSLIAQIEESLASFSILPQRLTMEITETALMQEKTWKTAHEVVKCGISISLDDFGTGYSSLSLLQKLPFSSLKIDRSFVRDFIDNLTDGTLVRAIIGLTRDLGMEVVAEGVETQIQATTLARYGCQIGQGYFFSRPIQTTQFLEYLKTA

>FEMY_02260_UniProt_A0A149W114
MAVKKYEAGVKEYRQTYWAPEYVPLDSDILACFKITPQPGVDREEAAAAVAAESSTGTWTTVWTDLLTDMDYYKGRAYRIEDVPGDDTSFYAFVAYPIDLFEEGSVVNVFTSLVGNVFGFKAIRALRLEDVRFPLAYVKTCNGPPHGIQVERDKMNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVQDAIENAQAETGERKGHYLNVTAPSPEEMYERAEFAKEIGSPIIMHDFLTGGFTANTGLARWCRKNGMLLHIHRAMHAVLDRNPHHGIHFRVLTKALRLSGGDHLHSGTVVGKLEGDRGATLGWVDLMRESYIPEDRSRGIMFDQDWGSMPGVFPVASGGIHVWHMPALVNIFGDDSVLQFGGGTLGHPWGNAAGAAANRVALEACVEARNEGRELEREGKEILTNAAKDSPELKIAMETWKEIKFEFDTVDKLDVVNR

>FEMY_02270_UniProt_A0A149W152
MADIQDYNSTPKYETFSYLPAMSPEKMRRQIAYIVSQGWNPGIEHVEPTRAFNYYWYMWKLPMFGEQSVDTIISELEACHRAHPNHHVRLIGYDNYSQSQGSSFVVFRGR

>FEMY_02280_UniProt_A0A149W125
MSDSKAENKGFAPNGASGRMLSRARRQAMSQSGKASLGQVRKAVPTIAPVRVQSVESAAPQSEPLKDDSHASSDCGCMHAVEQKTLDTVCALVEAEPPTTLGLTSSRVRQLCQERRRALSSQGKAAMKSAGMNAAATRHVSSNKTVGAVGLSGRAAARARREEMCVNGRGNDPACRPSGRVRSPAVPVKVEIGTTLSGNLVTGTQVERSSKVTGVESGSCRGITGTEYIGAEQYGKLCASVPPAPPAKVSVSNTSRNQRVSGVELGRSARVTGDEHGACKAVTGTEYLGAEQFESFCATKPVSAPAKVGVAITRAGLNVSGTEVGRSVKVTGDESGACNSKLTGSQYAQDLSVSMCQGSGVPHKVSVMSTVRDQPISGTMMEHNPKVTGDEYGGCQPISGTEYMGPDQYTAFCDADRQAASRALMASRGARAGITLSGTLVESGGRMTGAERGESQVLSGTPYSGPYQRVSQRGINSNPHPLTFGPANVSYEAESALQAVTEQSSFSIVTPARKAQDSRLSRITGNISGAQGRITGPVNLAAGLVSGTPEFRYRDDAYGVALIAMEQPQVPEAQRSRLTGDGREGGFAITGAGWRRNESITGTEGTSATRRNPTLRGNQRSMAMQVPAIKDREHLQVPPSKVTGSSGNAATGSTITYSGGARG

>FEMY_02290_UniProt_A0A149W122
MNTRNRPGRHTSPQFAASRPPYGLGTPNGALQGRQPETLAASLALESNPGCAMQGGRLCSHPLTNQMENRRLLAYEKTIKERFANIIPVLKRIAGLQHAAEFVAQAQAIANQELGFDLPSRILADAWVTGLDMSALYGETVMRTLRLLAEQARTSNPPEAVDVDEAVSFMLDCGYHAVDISPCSDGRLKGLVRYILRLPTGAVRSSKSYAGAMFDVEANVKRWIETELMRFREGRPVTPDAGTRYLKMVVYHTSSSDPAHEGCAAHGSNEVRAAEKGLERLREFRQAIENSFCCGASVDTLLIGVDTATDAIKVHVPDADGEMSLYRAVDNLALYEQTVNDDGNTARLKVYQAIQAASAQGGGWGRGNGEPHEGMRRLIATLLINNLSQIEYVCGNWGGRYPDIGHNERFISVGDGFEEFQLRNLAYFAHLHTVEEGAPDMDVGINIFKKLNVNHGLPIPLAIHFRYDSRVPGCRERTVERCQRVQAALELRYGELARQGLLVCGMTVQDKRPGSPIESIEANDA

>FEMY_02300_UniProt_A0A149W126
MKICQVEKTLVSTNRIKEMGHRPLLVVKEKGGSRSIAVDAVGCIPGDWVICVGSSAAREAAGSKDFPSDLTIVGIIDHWAED

>FEMY_02310_UniProt_A0A149W232
MEVMEVISDLVSTRRIPGLYSISLRVLRDAKGRLNVAADPVGVPPGKWVITVSGSAARYATGDYKILTDLTIGGIIDGWDPGTGQTGK

>FEMY_02320_UniProt_A0A149W130
MANVSGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHNEVENILPNQPEA

>FEMY_02330_UniProt_A0A149W148
MANIVSGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHNEVENILPTSPDTGLGGRDGDLSQAIA

>FEMY_02340_UniProt_A0A149W143
MYTDPRLSGYLSRALSHELAAVQQYLMQAKLTGLWGLSAQSAQFRRDVNEELVHAERLMERMLILGIPCNATQLPPIRPGRTLAEMLQIDRGLEIEAIRLYEEAAFYCARRQDGETQALMRALMEDELGHLKELDQQLSELKGE

>FEMY_02350_UniProt_A0A149W159
MTQAREEDTDIATPVAYKPVLNQRFDFGNYVETRRFLDQLAKLSRREDYYPNLSFGKTYVVVSIDAEGLATLDRRVSAFTSEMETLAVASGKV

>FEMY_02360_UniProt_A0A149W120
MSVKKMGSRLAQGVRQIKVQQNGEQPDMDPASVPVIPVAKMKSARVAVKPVSAKAGESSVLHPNRVWPD

>FEMY_02370_UniProt_A0A149W164
MNGVIDQYRVEQKPYYHTVADEVDLYEAAYGVRMPMMLKGPTGCGKTRFVEYMAWKLGKPLITVACNEDMTASDLVGRFLLDVSGTRWQDGPLAIAARYGAICYLDEVVEARQDTTVVIHPLTDNRRVLPLEKKGELIHAHPDFQLVISYNPGYQSLMKDLKQSTKQRFGALDFNYPEHAVEMEIVSHETGVPREVSDKLVSIAERARNLKGHGLDEGISTRMLVYAGSLIAKGVDPQNACRVALVRPITDDPDMRDALDAAVTTFF

>FEMY_02380_UniProt_A0A149W132
MAIELEKYQDILDELGEHASEVLRASWGEAARVFSPRGLEAYLHGATGLKSLGRGTDLVLSFIQSAPAVTRELGEDAVSDLLAAAIKMYSKTSATVISLVFSSSPIAASRLGDPELFRGYLHLIDTLLAQAPRGVRPMLDHLGTLLGQLTLGGLRRWALWGAQAHKTDFNAQIRYFGLESPESLGVLQKERRGTLFIDVQRRIGMYLRALWGRDFFMRPTSGDFEQREGYRPYIEGYIIHLPDAYDDLDLPSGKIDGVELYRAACAHAAAHQMYTKEPLSAEALTPLQMTVIGTIEDARVEQLAINSFPGLAPLWQKLHHATPHQNASIGDYLNRIARALLDPGYADPDPLIAKVRMLFAEQLNQLASNHLAWDIGVTLAHDLVQMRLPFVHTNMLSAPYRDDNRYLWDFDEVSEFAQVAPWQEKQVRKHVSLMEFANEVEVENAGDDAQEIWVLSSELFPYEDLGKSYNELEGKEPPPQPYHYAEWDYQMQLERPDWCTVLEKRPIPGEVEVIDDIVVKYKSIIGRLKYLIEAMQPQGVQRLRKQEDGDEIDLNAAVRAMIEMRMGEQPDPRVMMRNVRKVRDLSVLLLIDLSESTNDLVLGSNNTVLQLAREATVLLANALDKIGDPFAIHGFDSNGRHDVEYFRFKDFDMPYNDLAKSRLAGMRGQLSTRMGAAMRHAGSILKRRPSSRKLLLVVTDGEPADNDMRDPQYLRFDAKKAVEELTRSGITTYCLSLDPRADQYVSRIFGAKNYMVVDHVQRLPEKLPLLYMGLTR

>FEMY_02390_UniProt_A0A149W129
MPLVNMKDMLAHAYGHGYAVGAFDVVSLDFVEGVMAAAERSRAPVILSLAESHFEHYDFELLMSAMEAAARRSPVPVVLHLDHGASLESAVRAIRLGCNGVMVDASHMTLGENLTATRAVVEMAHACGVPVEGELGYVPGVEGEDAERHPGPLAYTTVAEAKGFVERAGVDFLAVSIGTVHGRLKGKAKLDFPRLRSINQALGIPLAIHGGTGLDDDQFRRLISNGVAKINYYTALADAAGAAIRARAKSAPGAGYTALVKDVSEVISIEAERCMRVWGSAGRAAEVTFHCRPWASVEHMIIHNVVGISEKEAAVMIAEGQQVLGAIPGVREDVGKTYIGPPPWRAER

>FEMY_02400_UniProt_A0A149W133
MILDQMVADAHGALVRAVPEHMLSTGELLTANQGAAEVLRGGGLVAFPTETVYGLGADAENPAAVARIFAVKGRPADHPLIVHIATPDQILHWAREIPTMAWHLARRYWPGPLTLILRRASCVPDIVTGGQDTVGLRVPDHPLALALLKVFGGGIAAPSANRFGRVSPTTAAHVREELGDAMDLILDGGPCHVGIESTILDLSGHQPRLLRPGAITLAEIEAVLKQPIAQPGNEAPRVPGMLRSHYAPKTPVCLIPPAYLEAEVRWHLGQGQRVAVLSRIALLLPDACLWKGMPDYPAGWARELYARLRALDVQCFDYILIEAPPIGADWQAVRDRLERAASAHPISSPRSSRGISAPFGEVGDHSVN

>FEMY_02410_UniProt_A0A149W245
MNQPKESLYKSIVQQREMLTELLYEPLHQLAEACSQVWSDRAKMETVLSDAFSSVPFCKFLYVLDTNAVQITSNISSDGLVVEHFGRDRSDRPYMREALLATGFFDKNREQHYQQWPYLREGVQATDFLLCEAYISLRALRPSLTAIQFVRNANGIVLGFIGADFALRDLPQTHQLYEEPRHWRQFVGDPSILVTVSNQTRSKSVMDRHLDTVLSVVEELILDHGVYHVILHFSSSQAIVWVMDDPYRYRVLPMDMLADPDSCMAYPKRPYPTDALVPAQQIRAVLDNLRALRFMNEMLYLRSGTLNIFNGIVGLTFSCEGSHYIPYDEFLKMDHGFWVSG

>FEMY_02420_UniProt_A0A149W136
MPIRHATLHQFKIFYAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFDQIGKKIYLTQAGTVLTVACQDMFGRLERVAQELAAIQGIEKGSLKLATLATAKYFIPRLLGDFCAKHPGIDAALFVGNREVLLERLARNQDDLYILGQPPAHMNVAAEPFADNPLVIVVRADHPLVPEEKIAPSSLRDVPFILREPGSGTRLATEEFFERHGIALKARMEFGSNEAIKQVVASGLGMAVLSASTISAELARGDLAVLDVCGFPLERKWYAVYPAGKQLTLTTKTFMEYLFAVAHRLDRLHMP

>FEMY_02430_UniProt_A0A149W158
MSSGKSVYNGSTAALLTQHGKERVIAPVLDIALACRVERVSGFDTDTLGTFTREIPRPGTQLEAARKKARIGMELSGLPLGLASEGSFGPDPFTGMFSWNMEMIVWIDDTLGIEVVGVASGPASFSHRLTAKWEDAEEFARQAGFPEHRLVVRPQGEEDPRIRKGISAWAELEAVFPWALAESTNGQVFIETDVRADANPARMEKIGQAARDLTRKLCTLCPICNAPGFQLAEHIPGLPCEYCGTPTQEARADIHRCVRCHHQVTAERPEKVAQAGRCDFCNP

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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