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BMC type: CsomeACh


Organism: Brevirhabdus pacifica. Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

        CLV77_2534 (fasta)
                 CLV77_2535 (fasta)
                        CLV77_2536 (fasta) HMMreg00126_1_mix CsomeACh (HMM details)
                          CLV77_2537 (fasta)
                                                   CLV77_2538 (fasta)
                                                         CLV77_2539 (fasta)
                                                                      CLV77_2540 (fasta)
                                                                            CLV77_2541 (fasta)
                                                                             CLV77_2542 (fasta)
                                                                               CLV77_2543 (fasta)
                                                                                 CLV77_2544 (fasta) H_greenApple CsomeACy (HMM details)
                                                                                   CLV77_2545 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                     CLV77_2546 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                                 CLV77_2547 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)
                                                                                                                  CLV77_2548 (fasta) HMMcsoS2_1_ACy CsomeACh (HMM details)
                                                                                                                    CLV77_2549 (fasta) HMMrbcS_1_CsomeA CsomeACh (HMM details)
                                                                                                                               CLV77_2550 (fasta) HMMrbcL_1_Csome CsomeACh (HMM details)
                                                                                                                                      CLV77_2551 (fasta) HMMreg00126_1_mix CsomeACh (HMM details)
                                                                                                                                               CLV77_2552 (fasta)
                                                                                                                                                     CLV77_2553 (fasta)
                                                                                                                                                         CLV77_2554 (fasta)
                                                                                                                                                            CLV77_2555 (fasta)
                                                                                                                                                                 CLV77_2556 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_greenApple

BMC-P(map on tree)

      2x P_neonPurple

(complete list of loci)

Protein sequences:

>CLV77_2534_UniProt_A0A2M9DAL2
MSKKHPIISVTGSSGAGTSTVKTTFDAIFRREGVKAASIEGDAFHRYDRAQMKTELQKRMAEGDYTFSHFSYDANELGELERVFREYGETGNGLKRHYVHDDEEAEKFGVPPGHFTAWTAFQEESDLLFYEGLHGAVVNDQVNLAALADLKIGVVPVINLEWIQKIHRDKASRGYTTEAVTDTILRRMHAYVHCICPQFSETDINFQRVPVVDTSNPFIARWIPTADESLLVIRFKNPRGIDFQYLTSMIHDSWMTRANSLVVPGGKMDLAMQLIFTPMIQRLVDESRKQ

>CLV77_2535_UniProt_A0A2M9DAQ2
MADPKRTCFPSVEGHPGVSDVLERMADVFRKTARLIARGEIEGDLAKAAGTNTDGDAQKALDVIADEAFMAALAGSDVRYYASEEQDSVVELNGQGGLGLAIDPLDGSSNIDTNVSIGAIFGIYPAGPDGDATFLRPGRELIAAGYAIYGPQCSVVLTVGDGILKFVLDPETQEFVQVASPAGVGIDSAEYAINASNYRHWTKPVRAYVDDLVAGAEGPRGRNFNLRWVASLVAETHRILTRGGIFLYPSDAREGYAHGRLRLVYECAPIAFLVEAAGGMASNGSDPILDIVPDELHARSPLVFGGVDKVMRVAGYHELPDEEISALFGNRGLFRA

>CLV77_2536_UniProt_A0A2M9DAL3
MFDAVTLKQLRSLKTVAETRSITEAAALHSLSPPAIHSQIRKLESLLDVHLLAKDVEDGGLAATAEARILISATQRIEGILGWARDNLRALESGNVGHVRLGFESTGRYFAPRVVALLKHCCPSVEISFEVANRGKVIERFEQELLDLAFMGRPPRTAGIEAAPIGEHPFGLFVPSGHELAERGDYNPEGLLGQVVFAREPGSATRILLDRYLDQIEGYGPPKLIQLDSNETIKECVMAGLGVAMLSHHVVQRELKEGRLTELKWPRLPIMRYWYLVSHRKEDGAESTQKVRQAVLDAHGSFIEG

>CLV77_2537_UniProt_A0A2M9DAQ7
MTKIKLSPLKKIEIVLGGEHVGFAKDLLDRAGVKGYTIVNNLSGKGSQGFHEGHLMFNEDDVLVMVIAAIVEERVDPILEGLEPFFSEHSGVVFVSDIQVTRLVKFSD

>CLV77_2538_UniProt_A0A2M9DBB6
MKQDLGRQLSIRATAYVAGEAVPFFWPMRTFVKRNPLHGLEHLAFEEALAKGADLFRARTFLSRGQYQAYLAGGKVSAESLEHEIAAAIGEAAGEAKNAATLPGIDLGAWVKSLLTGCIDPLSPAVAAKGPDLHAALHGAEIPAAPASREAVEAELLAAFPDDRPLYEAIDALFGTELGERLDGQVIRACLAFFDEGQSVWSMPDRSKGFFTAWRNVAPSGARRVLAEVEAGAPAGTAPGPERVIDHVLSAIGVPSEARPTYLTREMMRLQGWSGFIRWRAQAKRYYWSQEHPGDLVDLLAVRCTLGMALMQGLEGCPVTVPALRDLCAQRPFEMALRRDYHERRVPAPMIRDVQTAVERGKASRLDKVASRYLAERHRAAHRRLAGELQRLGRKTGQLDALMSLGPEDLAALVDLLSRIERREGMIWLRASEATALDTLMGGLTLTPPPPRDKRPFVQAAFCIDVRSERIRRHLEGVGDYQTFGIAGFFGVPASLLELGKGSEKHLCPVLLTPRNLVLEMSAADWSDEAAVTLLDKVMHELKETVISPFVTVEAIGLLFGLDMIGKTLAPQTYHRLRERLDAKKPRTHLILDKLSREQADSIVRAVQRAVIIEAAEHELGLPTEDINDAIVRELREYALKNAEPSPDLAARLKTDEPGLAGFVEQLREVYRINRGVADMQMEHLGRVGFGLEEQVMFVQQALSSIGLSENFSRFVLLVGHGSTSENNAYESSLDCGACGGNDGLSSARILANMANKHTVRRRLAEKGIEIPDDTWFLPAMHNTTTDEIALHDLELLPATHLVYLDRLRVGLASASRLCAQERLPALGFRSDHGCDPRAALRGTQRNAVDWSQVRPEWGLSGNAYFVIGRRDLTRGTSMDGRAFLHSYDYRLDPKRRLLENILTGPLVVGQWINLEHYFSTVDNDRLGAGSKVYQNVTGQFGVMTGNLSDLRTGLPSQTVLNRGQPYHQPLRLTTLIEAPFDHAMRAINGVASVKRLVLNGWIRMVILDPVTGQAHVFDESKWITRPSQIDQTEDLVTR

>CLV77_2539_UniProt_A0A2M9DAP5
MSSDLALLAGAALLLPLFPFSILAVAVFERIGNGTLRSLLLLVCLLPGAAVLDRAGFIPPDWMLAWAMLTAVFYAWRAVALQDARLWVVFLAVSSGALLWAGAGHDGLLWKALGLGLPLAMMSVLVELIERRFGAAHAGMDLRLATAAPKLSALFVAALLAVIAMPVSPSFFTMLALVVDQSRLSAPTTLAILGCWILWSWSAARLFAGIAVGPRRERTDDIPAGLARIYGAGFVGLGATGIVLGGMLL

>CLV77_2540_UniProt_A0A2M9DAK7
MTLLLPSVVALPLISAVLTFFLSARMGRKVSEISVALIALSFALTTLEFWSAIRGWEGRAEIVLGGWLTLFRDPLSAILAWVIAGFSLIVHVYSRRYMADEPGYARFFILLNLMTAALLVMVSASNLILLLIAWHFVGVLLYLLLGQDLHSRPAQRHAFTTFFTYRLGDLPMVLAAALLFHAYGTWSLTEIFARLGDTPQTTAFGLPLPVVVGFLIALSAFARSAQFLVHTWLPYTMNGPTPVSALMHAGIVNAGGVLVNRFAPVYVHAGEILHLMFVVGLFTAIVGSVLMLTQHDIKKSLGYSTMGQMGFMIMECGVGAFSLAIYHLIAHGMFKGTMFLNAAGVIRSARRDDGVPAEDLYTFIVERQVARRRRPWLAMAIFTLTVPAVILFLAHYFVEQAFMEKQGAVILLFFGWMTGAQLIFATYHMRAENPLRLFSLILVSFTIVVIGYSAIAHTFDLYLYPDEAFRKALYTAAGVKLIYFDVFVALLAAVIVLGWIFTYYSERKRLPAPVWSRRLRGMFYATVSREFFLGDVYARTARAVIGGAGRINAMLGWR

>CLV77_2541_UniProt_A0A2M9DAL5
MSPGTWEIPGGKVEPGEAAADAAIRELHEETGLVARNLRPVSRYAHRFERRSIELTLFEAAEWSGTPHGRENQRLDWVRPDQPHVAPILGSNFKALKLLTLPPRVMQVDPPAVDVSAWARDAALRARSSGAGAVFLACRRLPPAQQAALAGRLQAELSRQGIALWVDAAPDTAARAGAVLSTRCAQGPRQRGSGMIYAAIDPCGDEARHADVILLRDRPLPEGVPAFPPIYVFAGSPMHSRMDPRGLHGVICRNRDD

>CLV77_2542_UniProt_A0A2M9DAL7
MNTDAPTSKAPGRKPAKAKSGDDQPKTADRITDRTVGQTAGTTDAFGSATPAELSVWPD

>CLV77_2543_UniProt_A0A2M9DAY8
MTLMTTITPGTGMSVTAATPSDWKTVGKTASITRRFEFPDYARTSAFLDRVNALSEETGLFPDLGFAATYVNVTIPDDPERDQFALRINEAYAEGAE

>CLV77_2544_UniProt_A0A2M9DAL8
MATERAGIALGMIETRGLVPAIEAADAMTKASEVRLISRQFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLAAAHIIARPHSEVENVLPTDASA

>CLV77_2545_UniProt_A0A2M9DAR1
MNIMRVVRDLVTTQRVSGLQARPLRVLEDARGNFEVAVDAVGARVGDFVITIAYSSARIATGDPRVTTDLTIGGIIDDWDEDKWHGPARAGT

>CLV77_2546_UniProt_A0A2M9DAM1
MKIFQVERTLVATARITQLENHRLLVVREKGGSRSVAVDPVGCKEGDWVIAVGSSAAKDAAGHAKYPSDLTIVGIIDFWEADAAGKAAP

>CLV77_2547_UniProt_A0A2M9DAR6
MMSAIHTSSGPNKAWRASWVPMAQKARPRSTPSRPALSLSVGGGSHPFAEPAIALDLDRREQEVESSFARLSETLRDLAPRQFEDDFPALAVARLRAIGVDADPDWFHAHWTRPLDMGAIHARAASRLFATLVQSGTERDRYASDDGEPVAELIRRWGFHAVDITPCADGRLAGLLGAVLRIPLSIVTARKSFAGAMFNVAQNLHEWEEVELNRHRRGLPNAPDAGTRFLKVGVYHYSSVDPAHDGCAAHGSDTCRAMTALHGRLLEFQAAAQAMHGAGDEIALLLIGLDTDTDAIRVHVPDASGAMDDNRFVDAADLYQTTRDMPRDAAKDAVREAVARAAGVHADDAGTEGMRWFCGYLLKNNIAQVDAVLQKYHGPYPEAGHAEKLIVIGDPVDDVQLRNLAFQAQMNSVEEGAQDLKVGLHILAGQSSANVPVLVLRDFDPEIPGDDRAAAEVADRMRAAVLAMETEARVTVEAALRPGTGGALEFLEART

>CLV77_2548_UniProt_A0A2M9DBC6
MTSQNTLEGMSGREASQLRRRMLSQGKAALPVASERVRSGFREADMPAKTTPADAKVTMNTVVSPPPAPASPAAGGVATGRAASIERRRALSKGKAALPGASERLRSGFREASLPGTTATAQPSAPQNSNAGSAPQPKGGREASIARRRALSKGKAALPAASERVRSGFREADMPRDVAQAPMGSSMPDPSSVDLPGPAPERLSGREIAQMYRARRAKLGNGEQSCATQAQAARQGEMSYPRKVHSVTTAVANATVTGLSYASGRAMTGAEAGHDKPLTGTQYVGGTEGGYRASAGKVGHARTGGGQTVSGTMVRSGVRITGDEDNADLRITGNADQKFTDVEGRGESIVPTGAQFARQSQPHGTSVFGTNLGRSARSVGSRSRDTERAVEQTLAGHSVSGTAIGRSARVTGDENGSAHSLTGSQYLAPASQQAMSAPEGGRADPASGGKVTASQTWGGQTITGPEMERDRRVTGSEHGACQTLTGTPYYGASGAQGWCDPETACAEDARRAKQMPRAITGNVPLNDPMVSGTGRGADRNITGSSYFVAAERGREDDGDPVCQSIAGFSVMSPQRETHLQARATRPAEEQAPSAITGTFARGEGKVTGNAEFHAPRRSGAGGGQSGQRPARGNITGEGSTRGANITGSAWSENRHVTGTEDFFAAGRNPSERSGSANSFAGARSFKSKAPHYDPVSPVTGATGGTPASGATVTLSGGAAG

>CLV77_2549_UniProt_A0A2M9DAQ5
MADASAYPETKTRTETFSYLPPMSPERMAQQIAYCISRGWNPAIEYTEPEKSFSNFWYLWKLPFFGTQSVELVLNELEACHRANPGMHVRFIAYDNYAQSQGMAFVVYRA

>CLV77_2550_UniProt_A0A2M9DAL6
MAEKTYQAGVKDYAKTYWTPDYVPLDTDLLAVFKVVAQEGVPREEAAAAVAAESSTGTWTTVWTDLLTDLEYYKGRCYRIEEVPGNRDAFFAFIAYPIDLFEEGSVVNVLTSLVGNVFGFKAVRSLRLEDIRFPLAYVKTCGGPPNGIQVERDRLNKYGRALLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFMRWQHRFEFVMEAVQKAEAETGERKGHYLNVTAATPEEMYKRAEFAKQLGAPIIMHDFFTAGFTANTGLANWCRENGMLLHIHRAMHAVVDRNPMHGIHFRVLTKCLRLSGGDHMHSGTVVGKLEGDREATLGWVDQMREPFIPENRKRGLFFDQDWGAMPGVMPVASGGIHVWHMPALVQIFGDDACLQFGGGTLGHPWGNAAGAHANRVALEACTEARNQGRAVEREGRDILTEAARHSPELAVAMETWKEIKFDFDTVDKLDA

>CLV77_2551_UniProt_A0A2M9DAM4
MRIDLRQLEMIDAVARLGSLTQAAEALHVTQPAISSQIRKLEEQVGLPLIERDGRGIRLTEPGQSVADHARRAAQLLEDLREDLRQFKSVDKGVLRVAVVSTANYFIPEYIARFRAAHPGVEINLRVANRDEILEILAANESDLAITGQPPDDADLVARPFKENPLVVIAPPGHPLAGRKGVGPRDLVKYPFVTREQGSGTRGVMERAFLEHGLEYSIACVLSSNEAVKQAVQAGLGLAVISRQTIELELETGRLTTLQSDKLSLERQWFLLYRSYRRLSPAALRFRDQLMTPAP

>CLV77_2552_UniProt_A0A2M9DAM7
MTGSDTFEIFLAAPPGLEQILAREAEEKGFGPLEVVPGGVIFQGGWPDVWRANLQLRGAGRVLARIGDFMAFHLAQLDKRARKFPWDRFLRPDVPLRVEVTSRKSKIYHAGAAAQRIENAIRDTLGASVTPEAALVLKVRIDDNRVQLSVDTSGEPLHRRGHKEAVGKAPMRETLAAMFLRRCGFDGSEPVVDPMCGSGTFVIEAAEIAAGLAPGRDRRFAFQDLACFDAAAFEEMRGAGALPRPDSAVRFYGSDRDQGAIRMATANAERAGVAATTGFQMLPVGQLTPPPGPPGLVMVNPPYGARIGNKKLLFALYGTLGQVLTDRFRGWRVGLVTSDPGLAKATGLPFGPEEPPVAFGGLKVRLHRTDALR

>CLV77_2553_UniProt_A0A2M9DAZ6
MTDRTAPTPSGLLPAGDRMPDTRRRRLRAAMPPGAVLGGGAALAPGFYRRGGKRALDLSLIALFSPLLAPLMLLLWLAVRAGGGAAFFAQDRVGLDGRVFRCWKLRSMIPDADLALRRLCRDDPALAAEWRRHQKLTADPRITRVGRLLRRTGLDELPQIWNVLRGEMSLVGPRPFMPSQRGLYGAAGGFLYYRMRPGLTGPWQVSGRSQSGFADRAAFDDLYHRTTSLRGDLRILLRTVAVVLCARAE

>CLV77_2554_UniProt_A0A2M9DAN1
MERGRTGWSRPPNRLFQSWATWGRLTILCLCLAWGATGPIQAASAKPPGAPPLVIRGDPGGLLEERLTLIRRLRASGQRVELRSGECLSACTLYLGLSNLCVSPGVVFGFHGPSSVLRGLALPPDLFEKYSRLMAAHYPPPLRRWFLREGRQRTLGFHRIDGGTLIGLGVPACAA

>CLV77_2555_UniProt_A0A2M9DAR7
MNSFSPIPAPAFAFAALAHVALSQPAPAQGVAIDPGAVTAACASSGSSCRAIVDGHLARLAAAGLAPADLRSRIALLATAVLQAVTSAPPSRAADLADALASVLVRLADATDDPAQETTLRQVAGAVANGTFDTLPVGVAVAASPR

>CLV77_2556_UniProt_A0A2M9DAN0
MMTQAELLAGVLSRGGCLAAGLALMTGALGLAGPELEALRLAGRAAATPIWAWPEIPELSRTAMAPGRRARAAVTDGCIAALPPGPKGLVPEPALRRAARPCAALGRALTNRTPTDASAWLMRAHAARHLDHLPTARSMLERAHRADPESAHAARMRLGLAADLDGPAYDGRAEDMRLVAKSWQGQRFLAGLYRAAPRIRPALTAVLEGADHAVQNGFLRALRQMSGGARP

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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