Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: CsomeACh


Organism: mine drainage metagenome. unclassified sequences; metagenomes; ecological metagenomes.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

              CARN8_3200002 (fasta) HMMrbcL_1_Csome CsomeACh (HMM details)
                                 CARN8_3200004 (fasta) HMMcsoS2_2_ACh CsomeACh (HMM details)
                                               CARN8_3200005 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)
                                                 CARN8_3200006 (fasta) P_neonPurple CsomeACh (HMM details)
                                                   CARN8_3200007 (fasta) P_neonPurple CsomeACh (HMM details)
                                                      CARN8_3200008 (fasta) H_hotpink CsomeACh (HMM details)
                                                          CARN8_3200009 (fasta)
                                                            CARN8_3200010 (fasta)
                                                             CARN8_3200011 (fasta)
                                                                    CARN8_3200012 (fasta)
                                                                                         CARN8_3200013 (fasta)
                                                                                                  CARN8_3200014 (fasta)
                                                                                                           CARN8_3200015 (fasta)
                                                                                                                  CARN8_3200017 (fasta)
                                                                                                                                          CARN8_3200018 (fasta)
                                                                                                                                                         CARN8_3200019 (fasta)
                                                                                                                                                                  CARN8_3200020 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_hotpink

BMC-P(map on tree)

      2x P_neonPurple

(complete list of loci)

Protein sequences:

>CARN8_3200002_UniProt_A0A3P3ZNW9
MAVKKYEAGVKEYRQTYWAPEYVPLDSDILACFKITPQPGVDREEAAAAVAAESSTGTWTTVWTDLLTDMDYYKGRAYRIEDVPGDDTSFYAFVAYPIDLFEEGSVVNVFTSLVGNVFGFKAIRALRLEDVRFPLAYVKTCNGPPHGIQVERDKMNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVQDAIENAQAETGERKGHYLNVTAPSPEEMYERAEFAKEIGSPIIMHDFLTGGFTANTGLARWCRKNGMLLHIHRAMHAVLDRNPHHGIHFRVLTKALRLSGGDHLHSGTVVGKLEGDREATLGWIDLMRESFIPEDRSRGIMFDQDWGSMPGVFPVASGGIHVWHMPALVNIFGDDSVLQFGGGTLGHPWGNAAGAAANRVALEACVEARNEGRELEREGKEILTNAAKDSPELKIAMETWKEIKFEFDTVDKLDVVNR

>CARN8_3200004_UniProt_A0A3P3ZP53
MSDSKAENKGFAPNGASGRMLSRARRQAMSQSGKASLGQVRKAVPTIAPVRVQSVESAAPQSEPLKDDSHASSDCGCMHAVEQKTLDTVCALVEAEPPTTLGLTSSRVRQLCQERRRALSSQGKAAMKSAGMNAAATRHVSSNKTVGAVGLSGRAAARARREEMCVNGRGNDPACRPSGRVRSPAVPVKVEIGTTLSGNLVTGTQVERSSKVTGVESGSCRGITGTEYIGAEQYGKLCASVPPAPPAKVSVSNTSRNQRVSGVELGRSARVTGDEHGACKAVTGTEYLGAEQFESFCATKPVSAPAKVGVAITRAGLNVSGTEVGRSVKVTGDESGACNSKLTGSQYAQDLSVSMCQGSGVPHKVSVMSTVRDQPISGTMMEHNPKVTGDEYGGCQPISGTEYMGPDQYTAFCDADRQAASRALMASRGARAGIALSGTLVESGGRMTGAERGESQVLSGTPYSGPYQRVSQRGINSNPHPLTFGPANVSYEAESAPQAVTEQSSFSIVTPARKAQDSRLSRITGNISGAQGRITGPVNLAAGLVSGTPEFRYRDDAYGVALIAMEQPQVPEAQRSRLTGDGREGGFAITGAGWRRNESITGTEGTSATRRNPTLRGNQRSMAMQVPAIKDREHLQVPPSKVTGSSGNAATGSTITYSGGARG

>CARN8_3200005_UniProt_A0A3P3ZNW0
MNTRNRPGRHTSPQFAASRPPYGLGTPNGALQGRQPETLAASLALESNPGCAMQGGRLCSHPLTNQMENRRLLAYEKTIKERFANIIPVLKRIAGLQHAAEFVAQAQAIANQELGFDLPSRILADAWVTGLDMRALYGETVMRTLRLLAEQARTSNPPEAVDVDEAVSFMLDCGYHAVDISPCSDGRLKGLVRYILRLPTGAVRSSKSYAGAMFDVEANVKRWIETELMRFREGRPVTPDAGTRYLKMVVYHTSSSDPAHEGCAAHGSNEVRAAEKGLERLREFRQAIENSFCCGASVDTLLIGVDTATDAIKVHVPDADGEMSLYRAVDNLALYEQTVNDDGNTARLKVYQAIQVASAQGGGWGRGNGEPHEGMRRLIATLLINNLSQIEYVCGNWGGRYPDIGHNERFISVGDGFEEFQLRNLAYFAHLHTVEEGAPDMDVGINIFKKLNVNHGLPIPLAIHFRYDSRVPGCRERTVERCQRVQAALELRYGELARQGLLACGMTVQDKRPGSPIESIEANGA

>CARN8_3200006_UniProt_A0A3P3ZP43
MKICQVEKTLVSTNRIKEMGHRPLLVVKEKGGSRSIAVDAVGCIPGDWVICVGSSAARESAGSKDFPSDLTIVGIIDHWAED

>CARN8_3200007_UniProt_A0A3P3ZP58
MEIMEVISDLVSTRRIPGLYSISLRVLRDAKGRLNVAADPVGVPPGKWVITVSGSAARYATGDYKILTDLTIGGIIDGWDPGTGQTGK

>CARN8_3200008_UniProt_A0A3P3ZNV9
MANVSGIALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHNEVENILPTSPDTGLGGRDGDLSQAIA

>CARN8_3200009_UniProt_A0A3P3ZNX9
MYTDPRLSGYLSRALSHELAAVQQYLMQAKLTGLWGLSAQSAQFRRDVNEELVHAERLMERMLILGIPCNATQLPPIRPGRTLAEMLQIDRGLEIEAIRLYEEAAFYCARRQDGETQALMRALMEDELGHLKELDQQLSELKGE

>CARN8_3200010_UniProt_A0A3P3ZNW2
MTQAREEDTDIATPVAYKPVLNQRFDFGNYVETRRFLDQLAKLSRREDYYPNLSFGKTYVVVSIDAEGLATLDRRVSAFTSEMETLAVASGKV

>CARN8_3200011_UniProt_A0A3P3ZPC9
MSVKKMGSRLAQGVRQIKVQQNGEQPDMDPASVPVIPVAKMKSARVAVKPVSAKAGESSVLHPNRVWPD

>CARN8_3200012_UniProt_A0A3P3ZNY2
MNGVIDQYRIEQEPYYHTVADEVDLYEAAYGVRMPMMLKGPTGCGKTRFVEYMAWKLGKPLITVACNEDMTASDLVGRFLLDVSGTRWQDGPLAIAARYGAICYLDEVVEARQDTTVVIHPLTDNRRVLPLEKKGELIHAHPDFQLVISYNPGYQSLMKDLKQSTKQRFGALDFNYPEHAVEMEIVSHETGVPREVSDKLVSIAERARNLKGHGLDEGISTRMLVYAGSLIAKGVDPQNACRVALVRPITDDPDMRDALDAAVTTFF

>CARN8_3200013_UniProt_A0A3P3ZNX2
MAIELEKYQDILDELGEHASEVLRASWGEAARVFSPRGLEAYLHGATGLKSLGRGTDLVLSFIQSAPAVTRELGEDAVSDLLAAAIKMYSKTSATVISLVFSSSPIAASRLGDPELFRGYLHLIDTLLAQAPRGVRPMLDHLGTLLGQLTLGGLRRWALWGAQAHKTDFNAQIRYFGLESPESLGVLQKERRGTLFIDVQRRIGMYLRALWGRDFFMRPTSGDFEQREGYRPYIEGYIIHLPDAYDDLDLPSGKIDGVELYRAACAHAAAHQMYTKEPLSAEALTPLQMTVIGTIEDARVEQLAINSFPGLAPLWQKLHHATPHQNASIGDYLNRIARALLDPGYADPDPLIAKVRMLFAEQLNQLASNHLAWDIGVTLAHDLVQMRLPFVHTNMLSAPYRDDNRYLWDFDEVSEFAQVAPWQEKQVRKHVSLMEFANEVEVENAGDDAQEIWVLSSELFPYEDLGKSYNELEGKEPPPQPYHYAEWDYQMQLERPDWCTVLEKRPIPGEVEVIDDIVVKYKSIIGRLKYLIEAMQPQGVQRLRKQEDGDEIDLNAAVRAMIEMRMGEQPDPRVMMRNVRKVRDLSVLLLIDLSESTNDLVLGSNNTVLQLAREATVLLANALDKIGDPFAIHGFDSNGRHDVEYYRFKDFDMPYNDLAKSRLAGMRGQLSTRMGAAMRHAGSILKRRPSSRKLLLVVTDGEPADNDMRDPQYLRFDAKKAVEELTRSGITTYCLSLDPRADQYVSRIFGAKNYMVVDHVQRLPEKLPLLYMGLTR

>CARN8_3200014_UniProt_A0A3P3ZP66
MLSTGKMFSNVQGAAEVLRGGGLVAFPTETVYGLGADAENPAAVARIFAVKGRPADHPLIVHIATPDQIVHWAREIPTMAWHLARRYWPGPLTLILRRASCVPDIVTGGQDTVGLRVPDHPLALALLKAFGGGIAAPSANRFGRVSPTTAAHVREELGDAMDLILDGGPCHVGIESTILDLSGHQPRLLRPGAITLAEIEAVLKQPIAQPGNEAPRVPGMLRSHYAPKTPVCLVPPAYLEAEVRWHLGQGQRVAVLSRIALLLPDACLWKGMPDYPAGWARELYARLHALDVQCFDCILIEAPPIGVDWQAVRDRLERAASAHHVSSPRSSRGISAPFGEVGDHSVN

>CARN8_3200015_UniProt_A0A3P3ZNW4
MNQPKESLYKSIVQQREMLTELLYEPLHQLAEACSQVWSDRAKMETVLSDAFSSVPFCKFLYVLDTNAVQITSNISSDGLVVEHFGRDRSDRPYMREALLATGFFDKNREQHYQQWPYLREGVQATDFLLCEAYISLRALRPSLTAIQFVRNANGIVLGFIGADFALRDLPQTHQLYEEPRHWRQFVGDPSILVTVSNQTRSKSVMDRHLDTVLSVVEELILDHGVYHVILHFSSSQAIVWVMDDPYRYRVLPMDMLADPDSCMAYPKRPYPTDALVPAQQIRAVLDNLRALRFMNEMLYLRSGTLNIFNGIVGLTFSCEGSHYIPYDEFLKMDHGFWVSG

>CARN8_3200017_UniProt_A0A3P3ZP67
MSSGKSVYNGSTAALLTQHGKERVIAPVLDIALACRVERVSGFDTDTLGTFTREIPRPGTQLEAARKKARIGMELSGLPLGLASEGSFGPDPFTGMFSWNMEMIVWIDDTLGIEVVGVASGPASFSHRLTAKWEDAEEFARQAGFPGHPLVVRPQGEEDPRIRKGIATWAELEAVFAWALTESTNGRVFIETDARAHANPARMERIGQAAQDLVRKLCTLCPICNAPGFQLAEHIPGLPCEYCGTPTQEARADIHRCVRCHHQVTAERPEKVAQAGRCDFCNP

>CARN8_3200018_UniProt_A0A3P3ZNW6
MNRTTSIPLHSTVRTMDFNADDTDAISRIRVVYNSASLKAVVESACQRIVPLWPLNAFVAVSPYFGLRHQDFEQAGETLARAAGSPLVMPRRYYQEQISTGRIARVDLEQSLREHDLALSTATFEKAIASDTSPTIGQIALVSNVLEDLDGTPWTGFVIERISQFSAAYFDQGQAIWPMPWRKESLYEAWRHFAEIDLAPGMMGLREIRSAIAALPDLPMDTIALALQRLSIPTDRTDDFLHATLLNIGGWAAWTRYLRWEQELVGGQEDSIVDLLAIRLAWELILFNTRQTPKLEDAWRHAVQTMGQAPARSTQAHMQMDFVLQTAFELGYQKKIIAELANPARQAITKPDPVRPAVQAAFCIDVRSEVFRRALETVAPTVQTVGFAGFFGAFMEYVPLGASDARMHMPVLLTPGYRVHEHIHGASDQEVGKAINRRHQRLHSANTWKAFKSSPSSCFSFVESAGLLYGPKLLGDSFGWSRTVPHPETKGIASELRNRLAPTLEAVSHGHEITQTRQKSTQNPTVGIPMENRGASAEMILKAMSMTSNFARLILLVGHGSSTVNNPHATGLDCGACAGQTGEVSARVIAALLNDPKVRKELAQKGISIPSDTRFVPALHDTTLDKITLFDIEGLESTHAPDLKQLSKWLAQAGQLARMERSHLLGISNPSPEIVDSLIHERSRDWSQVFPEWGLAGNAAFIAAPRSRTTGIDLSGRAFLHDYEWRKDEGFGVLELIMTAPMVVANWINMQYYGSVVDNQRFGSGNKVLHNIVGGAIGVFEGNGGDLRVGLPLQSLHDGKRWVHEPLRLNVFLEAPKAEIDRIIAKHELVRELVENRWLFLFQIDDEHGGIYQRNTDGQWQRMTPN

>CARN8_3200019_UniProt_A0A3P3ZNY9
MLYTEIVMLSNLNFIILALISAVPLLLWVMGMFGSILSGEHAQRMARLSNGAAGLSFICAALAALLYAADGNSLTVTPFSFALPGNMGALALSIYINAVTVLMLSLVSFVGFVVSRYARNYLQGEKNQGRFYTWLNLTLASILTLIISGNMLMFVLVWMTTSLCLHHLLMFYPERTGAVLAARKKIIASRVGEVGLLIAVLLIGSTLHTMEFETVFHTMATMTGPLPAALQWASGLIVLAAALKSAQFPLQGWLIQVMEAPTPVSALLHAGIVNGGAFLIIRMSPLMSQSVNASNALAIIGLITIATAGLIMLTQTSIKVFLAWTTTAQMGFMLLECGLGLYSLAMLHLVTHSLYKAHAFLSSGSGVDIFRAPAVRSAQSTPTFWQWLVVLAFASLMTIGVGAAFGVALESQPALYALGTIVTVAMTQLLLQSFKAGMGAAFTLRTAGLSALVCTAYFSLHAAFHFMLETSLPAIRMVTSPTQFALVGLVMLTFFSILLIQQNLPNLAKYPMARRAYVHLYNGLYVDIPFSRLLQRFWPIQTVPYAQPKGVQS

>CARN8_3200020_UniProt_A0A3P3ZNW5
MLVAWQHQHGRHDLPWQGTQEPYRIWVSEIMLQQTQVGTVIPFYQRFMTAFPDVVDLARADLETVLGHWAGLGYYARGRHLHRAAQEIVQQGFFPRSPEELQKLPGIGRSTAAAIAVFAFGRRAAILDGNVKRVLGRFFALDNPGDAELWALAESQLPDRHLEAYTQGLMDLGSLLCTRARPQCTTCPLQPQCQAYLRGETLRYPTPRRKAVRSQRHHRLLLLCTPERQWLMEKRPAPGVWGGLWSFPMEIMDSQPAGHSLTLDLAPYPELEPPPFIHRLTHFNWHLTPRAFKVRDTVPPSSSSPWHWGSLSELMTYPLPAPIRQLLHGLTRKL

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
© www.kerfeldlab.org, 2022