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BMC type: CsomeACh


Organism: mine drainage metagenome. unclassified sequences; metagenomes; ecological metagenomes.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       CARN2_2139 (fasta)
                CARN2_2140 (fasta)
                     CARN2_2141 (fasta)
                         CARN2_2142 (fasta)
                           CARN2_2143 (fasta)
                                    CARN2_2144 (fasta) HMMreg00126_1_mix CsomeACh (HMM details)
                                                  CARN2_2146 (fasta) HMMrbcL_1_Csome CsomeACh (HMM details)
                                                     CARN2_2147 (fasta) HMMrbcS_1_CsomeA CsomeACh (HMM details)
                                                                     CARN2_2148 (fasta) HMMcsoS2_2_ACh CsomeACh (HMM details)
                                                                                     CARN2_2149 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)
                                                                                       CARN2_2150 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                         CARN2_2151 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                           CARN2_2152 (fasta) H_hotpink CsomeACh (HMM details)
                                                                                              CARN2_2153 (fasta) H_hotpink CsomeACh (HMM details)
                                                                                                  CARN2_2154 (fasta)
                                                                                                    CARN2_2155 (fasta)
                                                                                                          CARN2_2156 (fasta)
                                                                                                            CARN2_2157 (fasta)
                                                                                                                    CARN2_2158 (fasta)
                                                                                                                                            CARN2_2159 (fasta)
                                                                                                                                              CARN2_2160 (fasta)
                                                                                                                                                  CARN2_2162 (fasta)
                                                                                                                                                   CARN2_2163 (fasta)
                                                                                                                                                              CARN2_2164 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      2x H_hotpink

BMC-P(map on tree)

      2x P_neonPurple

(complete list of loci)

Protein sequences:

>CARN2_2139_UniProt_E6PLR7
MIEAKPPARAVDDTAASAQIDRYWQRYKPVLVTNLRDWLLIGEREGRRVHLERFTLAATEPEFWALAEHPQAAQTRLGAAFADFLARALTHAAPLAAPRHLATLLASYAREALHRVDAASPAAQTQLEALKASLQDALGAHFTGGRAGTSSAPPWFKPCSTACSPPGCCATSKGRARQHGSTGAPPPTICTCP

>CARN2_2140_UniProt_E6PLR8
MLRHEQGQGAAARFDWRAAAYDLHVPMMTELFAQLAQPNRLRALALEPMLDWAADALNRVDAATIRATLPPTSTCKTAARAAFPCCCATPPPCWGKRRRVPTCPPPPAPICRPWGWTPRTPLVRKIEWRGLSIQVRAALIKEHGPRDKNPGPQRAARRAEQANSREELAKRFETEQARAPKERSALRKTLAERHRAERQQLSTELRHERAAGIAENKVLGLGPQNAISQWAFEAPKRREALQKQKRQAGERRELTQKIPRTQVWRAWLE

>CARN2_2141_UniProt_E6PLR9
MRKLTVAALQAEIDHRRQRVIYRGLDGREKFTDIGPRLVMHDKSADSLEAALRIAAQKFGGTVDITGSSEFRERAARQAVRLGIEVANADLAAVVADEQAKVQQTRGIWHDPRQAPSATQRRDTPPRQNLTEQAPSQSCDTIDSADLAAESILGTSCIPRLGCS

>CARN2_2142_UniProt_E6PLS0
MQRRAAGFGEWNAKGQLTPLGQAAYARQQARLAQERKVLHKLTEERRRSRPSPAAAPPPPAETSRTPMPQAQDQARKQAESVKSVPFLPMLDLSPLPQQDSAHGQEPGVPRRGQPRSSRGHGRGGHGR

>CARN2_2143_UniProt_E6PLS1
MARSQGCLGAASREAAGAMGAVDTGGDSPLGTETPLEAWHRVDSSVRFLSEPNWLISLKSVLGVKR

>CARN2_2144_UniProt_E6PLS2
MPIRHATLHQLKIFAAVARHMSFTRAAEELHLTPPALSIQVRQLAEAVGQPLFNQIGKKIYLTPAGEALTTACRDVLDRLELLTQELAALQGLEKGSLKLATLSTAKYFIPRLLGAFCAKHPGVDSALFVGNREGLLERLARNQDDLYILGQPPAHMNVIAKPFADNALVVVARSDHPLLLEKDIAPSQLRDVPFILREPGSGTRLAAEKFFEQHGVAIKTRMEFGSNEAVKQVVVAGFGITILSDSTIRAELARGELAVLDVHGFPLGRKWYVAYPAGKQPTPIASAFMEYLFAGSAYGESAQ

>CARN2_2146_UniProt_E6PLS3
MAVKKYEAGVKEYRQTYWMPEYAPLDSDILACFKITPQPGVDREEAAAAVAAESSTGTWTTVWTDLLTDLDYYKGRAYAIEDVPGDDTCFYAFVAYPIDLFEEGSVVNVFTSLVGNVFGFKAIRALRLEDVRFPLAYVKTCNGPPHGIQVERDKMNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVQDAIENAQAETGERKGHYLNVTAPSPEEMYERAEFAKELGSPIIMHDYLTGGFCANTGLARWCRKNGMLLHIHRAMHAVIDRNPHHGIHFRVLAKALRLSGGDHLHSGTVVGKLEGDREATLGWIDLMRESFIPEDRSRGIMFDQDWGSMPGVFPVASGGIHVWHMPALVNIFGDDSVLQFGGGTLGHPWGNAAGAAANRVALEACVEARNEGRELEREGKEILTNAAKDSPELKIAMETWKEIKFEFDTVDKLDVVNR

>CARN2_2147_UniProt_E6PLS4
MADIIQDYNSTPKYETFSYLPAMTPEKMRRQITYIINQGWNPGIEHVEPARAFNYYWYMWKLPMFGEQSVDTIITELEACHRAHPNHHVRLIGYDNYSQSQGSSFVVFRGR

>CARN2_2148_UniProt_E6PLS5
MEQGTTLSGTTVTGTQVERSAKVTGAEPGSCRAITGTEYIGAEQYGELCAAIPEPAAAKVSVGSTSRGQRVSGVELGRSVKVTGDEHGACRTVTGTEYLSAEKFESFCATRPVPAPAKVGVATTQAGQRVSGTEVGRSARVTGDEPGSCLKLTGSQYYQPEQFGNLCRGRSGAPHKVSVMSTLREHSLTGTEIAPDARVTGAERGACASVTGTESAGLAQYQACNRKPVPAPGKVGVMRTWHEQPVSGTSVERSPKVTGDEYGACQPVSGTEYAGPDQYAAFCESDRQAAARAPMVRRSGAASAAMTGVRSGLDSKVTGAARGERQVLSGTAYSDTDRLLRQSRDVASSPHPLTRGPADAPSVAVTAPEVADVRGNFSVMTPARSAQGSQLSRVTGTAYGAAGRITGPVNLAAGLVSGTPEFRYRDEAYDAAPVAAAPEVPRSRLTGDGREGGFAITGAAWRRNESITGTEGTSTRRNPTLRGDQRGAVIGASQWKDRERPELPISRITGSSGNDAKGSAITYSGGARG

>CARN2_2149_UniProt_E6PLS6
MNTRNRPGRHTSPQSGASRPPYGLGTPAGLLQARPRQAVFTPQGIALDPGVAPNPACSTDSGRPCRHPLTNEVENRRLLVHELAVKGSFDAIVPVLKRIAGLQHEADFTERAQAIAREQLGFELPAQILADAWVADLDMRTLYGECVMRTLRLMAEQAQLSNPLQDTDEAVAFFLDCGYHAVDISPCSDGRLKGLVRYILRLPYGAVRSKKSYAGAMFDVDANVKRWIETELMRYREGRPVTADAGTRYLKVAVYHWSSSDPTHEGCAAHGSNVTAAAEAGLKRLNEFRQAIENSFCCGASVDTLLIGVDTDTDAIKVHVPDAAGEINLYRFIDNIELYRASVNDDASSARLKVYRAIQAASATTGWGAGSGEPHEGMRRLIASLLINNLSQIEYVCGNWGGRYADIGHAERFISVGDGFEEFQLRNLAYFAHLHTVEEGAPDMDVGIKIFKKLNVSHGLPIPLAIHFRYDSRVPGCRERTVERCQRVKGAIEARYADLAQKGLLVCGMTVQDKRPGSPIELVEAGAA

>CARN2_2150_UniProt_E6PLS7
MKICQVEKTLVSTNRIKELGHRPLLVVREKAGGPRQVAVDAVGCIPGDWVICVGSSAAREAAGSKDFPSDFTIIGIIDHWSEG

>CARN2_2151_UniProt_E6PLS8
MEIMRVVSDLVATRRVPGLRNASLRVLEDVQGRLSVACDPVGAPPGKWVITAGGSAARIASGDKATLTDLTICGIIDVWDAGDGK

>CARN2_2152_UniProt_E6PLS9
MIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPSRLAEVSDFN

>CARN2_2153_UniProt_E6PLT0
MIETRGLVPAIEAADAMTKAAEVRLVDRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKTPAAGDSGLDGVVSQSRS

>CARN2_2154_UniProt_E6PLT1
MATDPRRTGYLMRALSHELAAVQQYLAQASLTAMWQLGEHSSRFRRDAEEELGHAQQLIERMLVVGTPANGTQLPPIRPGRTLEEMLLIDRVLEIEAIRLYEEAAHYCARIRDGETQTLFAGLLQDELGHLRDLDRMLTEIHQGATS

>CARN2_2155_UniProt_E6PLT2
MSDANDPNAVPRAPQERLPTLNWRFDFGSYAETRSFLDQVADLSRREDYYPNVSFGKTYVNISIDAEGQAALAERNSSFTSEMEALAAADKA

>CARN2_2156_UniProt_E6PLT3
MADRIIAVINQKGGTGKTTLALNLAAGLARRGSTHLVDADPQQSLSQWVGMASAGAGLPPVAQPGSDPFATIGQLARTHRYVVVDCPPAVQGDVVAAVMRSVHVALIPVLPSPIDLWASVDMAATVGEARRLNPGLRACLVLNQLESRNALSRAMREAVAEFDVPVLQAGMQRRAAYRSAAVEGLSVYGLGKRAQTAVADMEAIIEEVLCL

>CARN2_2157_UniProt_E6PLT4
MGSKLAQGVRQVQSQQVKAQSSAADTSEPVAPAVKAPAKRTKASSAVKPDEKRPAKQTFAGGEQSPAPSLDDRKLHPRRIWPD

>CARN2_2158_UniProt_E6PLT5
MQTAIEQYFIRNAPYYRTVADEVELYEAAYSVRMPMMLKGPTGCGKTRFIEYMAWKLGKPLITVACNEDMTASDLVGRFLLDASGTRWQDGPLAIAARFGAICYLDEVVEARQDTTVVIHPLTDARRVLPLEKKGELVQAHPDFQMVISYNPGYQSLMKDLKQSTKQRFGALDFNYPAHGIETEIVAHETGVSAEIAGKLVSIAERARNLKGHGLDEGISTRMLIYAGSLIAKGVEPMAACRVTLVRPITDDPDMRDALDAAVSTFF

>CARN2_2159_UniProt_E6PLT6
MAVELEKYQDILDELGEHAGEVLRASWGEAARVFSPRGLENTYLQGATGLKSLGRGTDLVVSFIQNAPAVARELGEDAVSELLAAAIKMYSKTSATVIAAIFSTSPVAAARLGDPELFRGYLHLLDTLLAQAPRGVRPMLDHLSTLLGQLTLGGLRRWALWGAQAHKTNFDAQAKYFALESPESIGVLQKERKGTLFIDVQRRIGMYLRALWGRDFFMRPTSGDFEQREGYRPSIEGYIMHLPDAYDDFVFHSPTGEETRIPGIELYRASAAHAACHQVYTSTQFDSAGLSPLQVALVGLIEDARVEAIALRQFPGLRQIWLPLHTATPASGNEAAPLMARLARALLDQDYRDDHPWVALGRQLFSEQQERLASTEWVRDIGLRLAAEMLQLGVAYSATADIPDIPYRDDNRYLWEFEDIREAGQVVVGVTAQQIRKYVSVMEMVNTIDVPGAGDDANEIWVLASEFFRDEEPTSLNQQEGREPPPDPYHYPEWDYQMQLERPDWCTVLEKRAKSGELETIEEIVVKHKPIIGRLKHLIEAMQPQGVQRLRKQEDGDEIDLNAAVRAMIEMRMGEQPDPRVMMRNVRKVRDLSVLLLIDLSESTNDTVLGSDSTVLQLAREATVLLADALDKIGDPFAIHGFDSNGRHDVEYFRYKDFGAPYNDQAKSRLAGMSGQLSTRMGAAMRHAGSILKRQPSNKKLLLVVTDGEPADNDVRDPQYLRFDAKKAVEELTRAGIATYCLSLDPRADQYVSRIFGAKNYMVVDHVQRLPEKLPLLYMGLTR

>CARN2_2160_UniProt_E6PLT7
MKDTICHRRLRRFRWQSNHHRALRACHGLHRHVHWRSRACLAWGASWGAAAHAIGTAADYARDEEAGAVASLTMVIAGIGMILIAPFLSRFMG

>CARN2_2162_UniProt_E6PLT8
MEISPEQFALVEHCLPKQRGNVSMTNLQVVNAMLYVAEQGCKWRGLPHRFGNWHTIYTRMRRWAKAGVLDKMFEELQRQQVVRIKIEAVSLDSTSIKVHPDGTGALKKTDRSPSASPAAVGTPRFIWLPRMLERP

>CARN2_2163_UniProt_E6PLT9
MWLGTLSECAIHDTGDGPSFAYRATIMSSVRADYVDCTQHNSALLDASRVAPTRAC

>CARN2_2164_UniProt_E6PLU0
MDESIKFFVGLDAHKDSIAVAVCEAGREPSRFVGTLGPDVQGVLKTLCKYGPARQVSVVYEAGPTGYGLHRELTRRGYRCEIIAPSLIPRRAGERIKTDRRDCARLAELSRAGELKAIWVPDEAHEAMRNLWRAREDAVNLRLKVRQQLKAFLLRQDRRYAGKTSWTKMHQRWIADQHFAHPADQIALTEYQLAVQATEERVQRLTAALQQIVQGWRFEPVVAALRALRGIDTVSAIGLVCEVGDISRFGTARQLMGYLGLVPSEHSSGNSVRRGSITKTGNAHARRLLTEAAWNYRFPARISNELRDRSKALSPGIRTHAWKAQVRLCSRFAQLSSRGVQANKVCVAVARELAGFVWAIAQQAAPTPEAR

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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