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BMC type: CsomeACh


Organism: Acidithiobacillus ferrooxidans (Thiobacillus ferrooxidans). Bacteria; Proteobacteria; Acidithiobacillia; Acidithiobacillales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

                C3R74_10590 (fasta)
                          C3R74_10595 (fasta)
                                 C3R74_10600 (fasta)
                                           C3R74_10605 (fasta)
                                                                C3R74_10610 (fasta)
                                                                       C3R74_10615 (fasta)
                                                                         C3R74_10620 (fasta)
                                                                              C3R74_10625 (fasta)
                                                                                C3R74_10630 (fasta)
                                                                                    C3R74_10635 (fasta)
                                                                                       C3R74_10640 (fasta) H_hotpink CsomeACh (HMM details)
                                                                                         C3R74_10645 (fasta) H_hotpink CsomeACh (HMM details)
                                                                                           C3R74_10650 (fasta) H_hotpink CsomeACh (HMM details)
                                                                                             C3R74_10655 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                               C3R74_10660 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                                             C3R74_10665 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)
                                                                                                                                  C3R74_10670 (fasta) HMMcsoS2_2_ACh CsomeACh (HMM details)
                                                                                                                                     C3R74_10675 (fasta) HMMrbcS_1_CsomeA CsomeACh (HMM details)
                                                                                                                                                  C3R74_10680 (fasta) HMMrbcL_1_Csome CsomeACh (HMM details)
                                                                                                                                                          C3R74_10685 (fasta) HMMreg00126_1_mix CsomeACh (HMM details)
                                                                                                                                                                 C3R74_10690 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      3x H_hotpink

BMC-P(map on tree)

      2x P_neonPurple

(complete list of loci)

Protein sequences:

>C3R74_10590_UniProt_A0A365YAU0
MSDNRRSKTITQGVQRSPNRALLRAVGFGDWDFDKPIVGVANAHSSITPCNIGIGVLAARAEAALKSAGAMPQTFGTITISDGISMGTAGMKYSLVSREVIADSIETVCQGQSMDGVLALGGCDKNMPGAMIAIARMNIPAIFVYGGTIKPGHYRGQDLTIMSAFEAVGQHTVHKIDDEELLEIERRACPGAGSCGGMYTANTMSSIFEAMGMSLPYSSTMAAEDAEKAESAAQSAEVLVSAIRKQILPRQILTRQAFENAIAVAMAVGGSTNAVLHLLAIAHAAQVPLTLDDFEAMRERVPVLCDLKPSGRYVSTDLHRAGGIPQVMKILLAHGVLHGDALTISGQTLAEVLQDVPSEARTDQEVIRPWNNPIYAQGHLAILKGNLAPEGAVAKTTGFMAHKITGPARVFESEESCMEAILAQKIKPGDVVVIRYEGPKGGPGMREMLSPTSAIIGEGLGDSVGLITDGRFSGATYGMVVGHVAPEAAVGGTIALVIEGDSVTIDAGQRLLQLNVSDEEIGRRRAVWQAPAPRHTRGVLAKYAKLVSSASKGAVTD

>C3R74_10595_UniProt_A0A2W1K3J7
MPSSKKLLAAMQRAAEILRSGGLVVFPTETVYGLGADAENPAAVARIFAAKGRPADHPLIVHMARRDHLSQWSRDIPPAAFVLARRYWPGPLTLILHRACRVPDRVTGGQDTVGLRVPDHPLALMLLEAFSGGIAAPSANRFGQVSPTTVAHVREELGDAMDFILDGGPCRVGIESTILDLSGHQPRLLRPGAITLAEIEAVLEQPVIPQGNDALRAPGMLRSHYAPRTPLYLVPTGHLKAEICRRLRQGQRVGVLAMPATQLPESCLRHHMPPHPAGWARELYAQLRALDQQGLDGLLIEAPPSGADWQAVSDRLARAASAHTTFRF

>C3R74_10600_UniProt_A0A365YAC5
MKSIQHAVELDMAGLTGLFVTGTDTGVGKTWVAVALTRLLVQRGLSVRPRKPVESGCASGEDGLLPQDAAALWKAADSTESLQQVCAYPLRAALSPERAAALEGRTLTLDQLVTACQSGIGADDFLLVEGAGGLLSPLAAGTTNADLAAALRLPVLVVAADRLGVINHTLLTVEVLQHRALPLVGVVLNQTGPVIDPLLDNAADLACWLDCPVERIPHRSGHHATTWMGIGPFLHGLASRLAAAHTAPKATPPITANCAAQK

>C3R74_10605_UniProt_A0A365YB15
MPLVHMKDLLNHAYAHGYAVGAFDVVNLEFVEGVMAAAERSRAPVILSLAESQLEHYDFELLMSGVEAAARRSSVPVALHLDRGANLEAAVRAIRLGCNSVMMDASQSTFSDNLAHTKTVVEMAHACGVPVEGSLSYLTDAMDINAQWHTAALPSTTVAEAKGFVERTGVDFLEVSIRVEQSCPNSKAKLDIQRLRSINQALGIPLSIHCRVRLDDDQFRRLIVHGVAKINCFTALAEAANAAIRARARSAPGAGYLDLVQSVGAAISAKAERCMRVLGAAGRAAEVLACCRPWAPVEHLIIHNVIGISEKEVAAMMSEGQQALSTIPGVRSVITGKAMKEHAQYRYCWRVRFAAPEVIDSYHRHPDYTAFTNRRFLPVADREISIDYAMESL

>C3R74_10610_UniProt_A0A2W1K3Z1
MAVELEKYQDILAELGEHAVEVLRASWDEAARVFTPRGLENYYLNGATSLKSLGRGTDLVVSFIQSAPAVAHELGEDAVREMLAAAIKMYSKTSATVIAAMFSSSPVAAARLGDPELFRGYLHLLDTLLAQAPRGVRPMLDHLSTLLGQLTLGGLRRWALWGAQAHKTDFDGQAKYFALESPESIGVLQKERKGTLFIDVQRRISMYLRALWGRDFFMRPTSGDFEQREGYRPSIEGYIIHLPDAYDDLVWQAPSGEETHIHGIELYRASAAHAACHQVYTTDQFDSTGLSTLQSALIGLIEDARVETIALKQFPGLRHIWLPLHTATPASGNEAASLMARLAHALLDPDYRDDHPWVAMGRQIFSEQQERLVSTEWSREVGLRLAAEMLQLGVAYSATTDVPDIPYRDDNRYMWEFEDIRADGQVIAGVTTQQIRKYVSVMEMVNALDVPGAGDDANEIWVLSSEFFRDEEPTSLNQQEGREPPPDPYHYPEWDYQMQLERPEWCTVLEKRAKSGTLETIHEIVAKHKPIIGRLKFLIEALQPQGVQRLRKQEDGDEIDLNAAVRAMIEMRMGEQPDPRIMMRNVRKVRDLSVLLLIDLSESTNDPVLGSNSTVLQLAREATVLLADALDKIGDPFAIHGFDSNGRHDVEYFRYKDFGASYNDQAKSRLAGMSGQLSTRMGAAIRHAGSILKRQPSNKKLLLVITDGEPADNDVRDPQYLRYDARKAVEDLTQAGIAPYCLSLDPRADQYVSRIFGAKNYVVLDHVQRLPEKLPILYMGLTR

>C3R74_10615_UniProt_Q9X9L2
MSPEIDQYLVRNMPYYRTVADEVDLYEAAYSVRMPMMLKGPTGCGKTRFIEYMAWKLGKPLITVACNEDMTASDLVGRFLLDASGTRWQDGPLAIAARFGAICYLDEVVEARQDTTVVIHPLTDARRVLPLEKKGELVQAHPDFQIVISYNPGYQSLMKDLKQSTKQRFGALDFNYPAHDIETEIVAHETGVSVEIAGKLVSIAERARNLKGHGLDEGISTRMLIYAGSLITKGVEPLAACHMTLVRPITDDPDMRDALDAAVSTFF

>C3R74_10620_UniProt_A0A2W1K301
MPVKKLGSKLAQGVRQVQAQQVEKSAPIVDACAAAAPDAQPNGLSTVRPGEKPPPLSNSTEEKRPSAPRSEHQQRLHPRRVWPD

>C3R74_10625_UniProt_A0A365YBZ6
MADSIIAVINQKGGTGKTTLALNLAAGLARRGSTHLIDADPQGSISQWVAMADGSAGLPPVAQAGRDPFATIAQLAYTYRYVVVDCPPAIQGDVVAAMMRSVQVILIPVLPSPIDLWASVGMAAALGGVRRLNPGLRAGLVLNQLESRNALSRAMREALAEFDVPILQAGMQRRAAYRSAAVEGVSVYGLGKRAQAAVADMEAIIEEVLCL

>C3R74_10630_UniProt_A0A2W1K303
MNAVKDLNAASSGPQELLPTLNWRFEFGSYVQTRHFLDQMADLSKREGYYPNVSFGKTYVNISIDAEGRAELTERNSRFTGEMEALAATART

>C3R74_10635_UniProt_A0A2W1KFE9
MANDPRMTGYLTRALSAEMAAVQQYLTQASLTAMWQLKEYSSRFRRDAEEELGHAQQLIERMLILGIASNGTQLPPIRPGRSLEEMLLIDRGLEIDVIRLYEEAAHYCARMRAEELQALFAGLLQEELGHLRDLDHLLIEMHRGATS

>C3R74_10640_UniProt_A0A365YAV0
MINVSGVALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKTPDAGDSGLDGVVRQSLS

>C3R74_10645_UniProt_A0A2W1K3I9
MANVSGVALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPSSPVE

>C3R74_10650_UniProt_Q9X5Z6
MANVSGVALGMIETRGLVPAVEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPSSPVE

>C3R74_10655_UniProt_Q9X5Z5
MDIMRVVSDLVATRRIPGLQNASLRVLTDAKGRISVAADPVGVPPGKWVIAVSGSAARYAAGDYRILTDLTIAGIIDHWDPSGSQTGN

>C3R74_10660_UniProt_Q9X5Z4
MKICQVEKTLVSTNRIKEMGHRPLLVVKEKGGARSIAVDAVGCVSGDWVICVGSSAAREAAGSKDFPSDLTIVGIIDHWSED

>C3R74_10665_UniProt_A0A365YA45
MNTRNRPGRHVSPQPGVNRPPYGLGTPASTLQARPQKPVFAARDLVLSPKSAPNPACSSDPARPCRHPLTNELENHRLLAHEQAVKGHFAAIIPALKHLAAQQHEADFLERAQRVAHTDLGFLLPAGILEDAWIANLDMRALYGACVMHTIRLMAEQTQAVPQNSDEVTSFLLDCGYHAVDITPCSDGRLKGLVRYILRLPDDAVRSRKAYAGAMFDVEANVKRWIETELMRYREGRPVSADAGTRYLKIAVYHWSSSDPAHEGCAAHHSSERDAAEAGLGRLREFRQAIENSFCCGASVDTLLIGVDTDTDGIKVHVPDADGEMSLYRCVSNLTLYKDTVNDDASNARLKVYQAIQAASATDGWGKGNGEPHEGMRRLIATLLINNLSQIEYVCGNWGGRYPDIGHNERFISVGDGFEEFQVRNLAYFVYLHTVEEGGPDLDVGLQIFSTLNVLHGLPVPVAIHFRYDRRVPGSRERTVERCQRVKAAIEARYAELHRQGLLVCGMTVQDKPPGSPIEPVEANGASALRSAR

>C3R74_10670_UniProt_A0A365YBW9
MSDSMANNMASPRSTRAAALERRRALSHNGAAALGAKPSASEARTVGNMAAMEATGATGKSLSRARREALSQGGAIGLAQANSTAHTGIRVVASDTPTVTAAPVEAAAAAQDLPPPNGCGCKGKDATEIAEREQLLEAVCALVDEDPASVAGPSASAVRKLCQERRRALSTQGKVASSCSRVSRISHNSGQPDALAGLSGRDAAQARREAMCQKGRSDQSAYRPSGRTRQKPAAPAKVEQGTTLSGTSVTGTQVERSAKVTGAEPGSCLAITGTEYIGTEQYGALCTATPEPAPAKVNVGRTTRGQRVSGVELGHSVKVTGDEHGTCKAVTGTEYLSADKFESFCATRPALTPAKVSVAATEAGQRVSGTEVGRSARVTGDEPGSCRKLTGSQYYQPESFGSLCRDGGSAPHKVSVMSTLREHALTGTETAPGNRVTGTERGVCASVTGTESAGLAQYQACNRKPVPTPEKVGVTHTWHEQPVSGTSVERSPKVTGDEYGGCQPVTGTEYAGPDQYAAFCASDHQATAQALMAKQSGVADAMMTGIRLGPDNKVTGSARGEGQVLSGTPYAGTDQRALHKSGNGTRMHPLTRGPADAPHTAVAAPEVAAVRGNFSVTTPARSAQERPLNRVTGIAYGAVGRITGPVNLAAGLVSGTPEFRYRDEAYGAVPTTAATEVPRSRLTGDGHEGGFAITGAAWRRNESITGTEGTSTRRNQTLRGDQRGKVLGASQMKDRERPALPTSRVTGSSGNDAKGSPITYSGGARG

>C3R74_10675_UniProt_A0A365YC06
MADIQDYDSTPKYETFSYLPAMGPEKMRRQIAYLVNQGWNPGIEHVEPERASTYYWYMWKLPMFGEQSVDTVIAELEACHRAHPNHHVRLIGYDNYSQSQGSAFVVFRGR

>C3R74_10680_UniProt_A0A2W1KPG5
MAVKKYEAGVKEYRQTYWAPEYVPLDSDILACFKITPQPGVDREEAAAAVAAESSTGTWTTVWTDLLTDMDYYKGRAYRIEDVPGDDTSFYAFIAYPIDLFEEGSVVNVFTSLVGNVFGFKAVRALRLEDVRFPLAYVKTCNGPPHGIQVERDKMNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVADAIHTAEAETGERKGHYLNVTAPSPEEMYERAEFAKELNMPIIMHDFLTGGFCANTGLARWCRKTGTLLHIHRAMHAVVDRNPHHGIHFRVLVKALRLSGGDHLHTGTVVGKLEGDRASTQGWVDLLRESFVPEDRSRGIFFDQDWGSMPGVFAVASGGIHVWHMPSLLAIFGDDAVFQFGGGTLGHPWGNAAGAAANRVALEACVEARNEGRDLEREGKDILTNAAKDSPELKIALETWKEIKFEFDTVDKLDVVNR

>C3R74_10685_UniProt_A0A365YA16
MSIRHATLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFNQIGKKIYLTPAGEALTSACHDVLDRLEYFTQEIAALQGLEKGSLKVATLSTAKYFIPRIMGGFCTEHPGVATALFIGNREALLERLARNQDDLYILGQPPEHINVVAEAFADNPLVVVSRSDHPLASEKDLEPSRLRDAPFILREPGSGTRLAAEKFFEQHGVVLRTRMEFGSNEAVKQTVAGGLGIAVLSASTIHAELASGELVILDVRGFPLERKWYAVYPAGKLLSPIVRAFMGCLFAVSAHGEKEWRAQE

>C3R74_10690_UniProt_A0A365YAW1
MTTAYDREILQLDPVKDHCRITFLMATCVYPFDIARALELALFRTYAVPRISALLRHTGELTERTRKRYDDTDLLLSELIEHGYDSPQGQAAIENINRQHAKYTIRNKDYLYVLSTFIFEPIQWIARFGHRPLSEKERLAWFHFWRAIGVRMNIQDIHDEYAELEQFNRSYEAECFHYSNSNRCVAEKTIDLLLGFYMPPVLFRLGRPAVYALLDRPLLNALGLSGQSIWLSRVLTRALRLRGRIASALPIKNKPVMRTQLRRPTYPEGYRIEDLGPEKPTQQRD

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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