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BMC type: CsomeACh


Organism: Bradyrhizobium sp. STM 3809. Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

                                                        BRAS3809_2230001 (fasta)
                                                                                            BRAS3809_2230002 (fasta)
                                                                                                               BRAS3809_2230003 (fasta)
                                                                                                                    BRAS3809_2230004 (fasta)
                                                                                                                          BRAS3809_2230005 (fasta) H_greenApple CsomeACy (HMM details)
                                                                                                                                BRAS3809_2230006 (fasta) H_greenApple CsomeACy (HMM details)
                                                                                                                                     BRAS3809_2230007 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                                                                           BRAS3809_2230008 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                                                                                                      BRAS3809_2230009 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)

BMC shell protein types:

BMC-H(map on tree)

      2x H_greenApple

BMC-P(map on tree)

      2x P_neonPurple

(complete list of loci)

Protein sequences:

>BRAS3809_2230001_UniProt_H0SX89
MSDVIDLDAPAAAVAPTPALESAIAGACRRIAPLWPLKNFVAVNPFLGFCGQSFHATCATLHRVARIETLMPRAFYREAIRNGTIEQADLAAALAAAPADWRLPPDVAELLKLAGSDQTARKHPAVVATVAEVLNELAAGDRHVARTAFMTDEISRWCAAYFDEGQSVWRMPWRGLRPYAAWRASVRYDRNPEAMGIARFRELVAELPDDYVAAIATVVERLGVPDRAIEDYLHQALLEIGGWAAYARYLMWNHELAGDRDDTLEQLLAIRVVWGYTLFAQRNDSAFREAWRRAMEQAALPPLDDRLGGDPDLCINMVLHESYEIAFRRRLLQRLAQPPGGRAAAARPEVQAAFCIDVRSEVYRRAMESVSESVETVGFAGFFGFPIEFVPIGHVVGRAHCPVLLRPQFTVCEAVGGTSEEEDSEILVMRLLRRRARKAWKSFKLSAVSSFIYVETAGLLFAGKILSDSLAVTRTVHDPNTDGLDDAVIGRLGPRITPSIVGGRQTGFDPVQRVAMAEAVLRAMSMTGPFARLVMLTGHGSTTVNNPHASGLDCGACGGNTGEANARVAAAILNDPDVRVGLRERGIDIPRDSFFLGALHDTTTDEIRLYDLDRLPATHAEDLRRLRELLAKATSLTRLERAALLGIPPRGDAEQNVVKRSRDWAQVRPEWGLAGNASFIAAPRARTRGIDLEGRAFLHDYDWRQDKDFATLQLIMTAPMVVASWISLQYYGSTVNNAAFGAGNKVLHNVAGTIGVLEGNAGDLKVGLPWQSVHDGTRFVHEPLRLTVLIEAPLDAIERVIAGNAGVRDLVDNGWVHLYAISDQGRVSHRYQSGLRWQALN

>BRAS3809_2230002_UniProt_H0SX90
MMTSALWLALSGPAALLAAYLAPSIRPTLSHQAMNRIAGLASGLACAVAFATALEVGLMGALHTPALAVSGVGFGLYLDSVSATMFCLVSFIGIIVLRYSFTYMDGDPGQIRFIRLMCLTLAAVLTLAISGNLLQFTLAWSATSLALHRLLVFYAERPAAVIAARKKFLASRLGDLFLVTAMLLLYGAFGSLDYQAMFSAAKAMHAQGAVPMGIQIAAVLMVFAGLLKSAQFPVHGWLIEVMETPTPVSALLHAGIINAGGFLVLRFTDVITLSLTSLDLLAVVGGFTALFGSVVMLTQTSIKVSLAWSTIAQMGFMMLECGLGAFAAALLHIVAHSLYKAHAFLSSGSVIDIARASWTPSPGGKPHPFRLIISIAGVLMVTLLFSVLTGATPARQPGVFALGAVLLLGLIHLVANGIDERPNAYVVLRTLLLAAVVAGAYFGLQLAAEQLFAAALPKTEALRGPLGIVIVALVVLSFATVTFLQGFVPRQATEPRWQALYVHVANGFYVNTITNRLVLHYWPGPAPKSAPLALPIVLREHP

>BRAS3809_2230003_UniProt_H0SX91
MGSPVIDVAVAVVRDGSGRVLLAERTPRQVAAGFWELPGGKIDPGESAAAAAARELGEEIGLHATALRPWLNYVHAFPTKRVRLHLFHIEAWRGTPQGREGQRLAWVDPGAPAVAPLLPSNRRAMFALGLPRLLARIDDHDPTRAIAAAAAARDQGAGLILLSAPHCASGQQASLVHRTIAAVAGVRVLLQGTALEARRAGAHGAVASAAILRRCATRPAVPLWGAACGSADDLALAAHLGADFAIADAAQRTGGQPSGPTVFRADDTAAPLPLFTAADITTREPSRFLGTTGVRR

>BRAS3809_2230004_UniProt_H0SX92
MSHPPSLFCRYEFASYAQTREFLDALAVLSEETRLFPDLGFARTFVNITLRGRDGASPGPAEIDYARRAAVLAAAWTVS

>BRAS3809_2230005_UniProt_H0SX93
MIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLAAAHIIARPHSEVEHILPLYPQGEMLSDEVAAQ

>BRAS3809_2230006_UniProt_H0SX94
MIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLAAAHIIARPHIEVEHVLPRPGMTRLEDQSMPRIPAAE

>BRAS3809_2230007_UniProt_H0SX95
MQISRVVRDLVTTKRVFWLASKSLRVVEDPAGNLDVVVDPIGTKPGDYVITIGYSAARAAAGNPNITTDLTIGGIIDDWSEERWRA

>BRAS3809_2230008_UniProt_H0SX96
MKICQVEGTLVATARIPGLLNRRLLVVKERGSSAKQVAVDPVGCKPGDWVIAVGSSAARDAAGSKDFPSDLTIVGIIDYWDDPAGRAAQKVVANAD

>BRAS3809_2230009_UniProt_H0SX97
MHAKLQLEIPRKALAASWTAPLDLRGLHARCVLGTFCRLIAHAFDRGLAQFSDGEPADALIRRWGFHAIDITPCADGRLSGLTDYILRVPPSIIAFRESHAGAMFDVAHAVRHWESVELRRWRDGWPNAAEARTRFLKIGVYHLSSVAPGHEGCAAHGSDDTRAAGALLERLDQLAQAVRALHGPDAAIATLLIGVDTDTDAIRVHVPDAAGRMDIGRYADSRALYDATAHLSRDGAKDAIRDAVAACAGVPADDTATEGMRWFCGYLLKNNFGQVEAVRDWHQGRYADAGHTERLIVVGDPVDDLQLRNLAFQAQMQTVEEGAADLDVGIRILRAHHAAYGLPVPVLVHIRFDPRIPGAADAAAQRARRLAAAVTARHGELAARGDLCVAAVLRAADGSVLSPIDLTASHGDAPPEVHR

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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