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BMC type: CsomeACh


Organism: Bradyrhizobium sp. (strain ORS 278). Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

     BRADO2268 (fasta)
           BRADO2269 (fasta)
                  BRADO2270 (fasta)
                             BRADO2271 (fasta)
                                  BRADO2272 (fasta)
                                       BRADO2273 (fasta) HMMreg00126_1_mix CsomeACh (HMM details)
                                                BRADO2274 (fasta) HMMrbcL_1_Csome CsomeACh (HMM details)
                                                  BRADO2275 (fasta) HMMrbcS_1_CsomeA CsomeACh (HMM details)
                                                           BRADO2276 (fasta) HMMcsoS2_2_ACh CsomeACh (HMM details)
                                                                     BRADO2277 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)
                                                                      BRADO2278 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                       BRADO2279 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                         BRADO2280 (fasta) H_greenApple CsomeACy (HMM details)
                                                                          BRADO2281 (fasta) H_greenApple CsomeACy (HMM details)
                                                                           BRADO2282 (fasta)
                                                                                BRADO2283 (fasta)
                                                                                          BRADO2284 (fasta)
                                                                                                          BRADO2285 (fasta)
                                                                                                                               BRADO2286 (fasta)
                                                                                                                                 BRADO2287 (fasta)
                                                                                                                                  BRADO2288 (fasta)
                                                                                                                                     BRADO2289 (fasta)
                                                                                                                                                          BRADO2290 (fasta) HMMreg07568_1_eut2 EUT2B (HMM details)
                                                                                                                                                              BRADO2291 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      2x H_greenApple

BMC-P(map on tree)

      2x P_neonPurple

(complete list of loci)

Protein sequences:

>BRADO2268_UniProt_A4YQC7
MALLEIQGLTAFYRDFQALFGVDLMLEAGETIAIVGANGAGKSTLMRSISGVLRNGADQIVFDGRPIGALAAPDVVALGVAMVPEGRKLFPSLSVEENLLIGRYGRATPGPWSLETIYRLFPVLKERRHTPGTALSGGQQQMVAIGRALMSNPRVLLCDELSLGLAPIIIKDIYAAFPEIRASGASIVIVEQDIGQAMKVADRLYCMMEGRVTLSGRPAELSREAIHAAYFGAHA

>BRADO2269_UniProt_A4YQC8
MSWADTILQGVLLGGLYALFAAGLSLVFGIMRLVNLAHGDLIVLAAYLILVLVSGLGLHPFVAVLIAMPLMFGIGWLLQAYVLNRTLGPDILPPLLVTFGLSVVLQNGLLQAYSADSRRIPSGSLETASVALGPFNIGVMPMLTFASAVAVILILNRVLYGTELGRAFRATSDDAVTAGLMGIRPNRTFAVATGIAMAIVAIAAVFLGTRANFDPTIGPARLIYAFEAVIMGGLGSLWGTLAGGVVLGVAQTVGGAINPEWQILAGHIAFVLVLLVRPRGFFPRAVD

>BRADO2270_UniProt_A4YQC9
MHRRSIPWRVETRTKASIVFAVIAALIVVAGVIAPAYLPRSTLQDLFFILTMLVLAQSWNLLAGYAGLVSVGQQAFVGLGAYAMFAGVVLLKLDPLVSVLLGGAAAALLAIPAGFFAFRLQGAYFAIGTWVVAEIVRLLVAQWKTLGGGTGTSLPGAATRAMFGTDVVQRLLGVRPAQAVDIICYWLALLLAVATIFTVYRLLRSRHGLALASVRDNQEAARAIGVDARRLKAMVYLTSAALTGLVGALIYVQKARISPDAAFSVIDWTAYVIFIVVIGGIGTIEGPIVGVLIFFGLQKLLADFGSLYLLALGLIGIVIMLFAPQGLWGLFASRTGIQLLPVRRLLRGGSIDN

>BRADO2271_UniProt_A4YQD0
MADITTDVLIIGTGPAGSAAAALLSTYGVENMVVNRYRWLANTPRAHITNQRTMEVLRDLGRDVENEAYMFASQQDIMGENVFCTSLAGEEIGRLKTWGNHPLSRAEHQLSSPAKMNDLPQTYMEPLLFKTACSRGTQARMSTVYESHVQDDHGVTTTLLDRLTGKTFTVRSKYLIGADGGNSLVAQHAGLPFEGKMGVGGSMNILFKADLSRYVAHRPSVLYWVVQPGADVGGIGMGLVRMVRPWNEWLIVWGYDINQPAPEVDEAFAVKVARDLVGDQELQIELQSVSTWTVNNMYATRTSHGRVFCMGDAIHRHPPSNGLGSNTSIQDAFNLAWKLAYVLKDRAGPKLLDSYTIERAPVAKQIVTRANKSIEEFGPIFQALGLLDSVDPVKMQQNMDARCDRTEQAEQQRAKIRETIASKVYEFDAHGVEMNHRYRSDAIVTDGQAEPAFTRDPELHFQQTTWPGARLPHAWLFGKDGTKISTLDLAGHGKFTVLTGIGGETWVQAARKLGQELGIEIDAHVIGPRQVWQDLDGDWSRLREVRDGGIVLTRPDQHVCWRRETLAEDPAAELRRVFKQILAN

>BRADO2272_UniProt_A4YQD1
MDDHEQGYFTEENSAEVVIGRNKNAKDARLKEVMAVITRKLHEAVKEIEPTQQEWFEAIMFLTRTGQMCTDWRQEFILLSDVLGVSMLVDAINHRKPAGASESTVLGPFYVHDAPELPLGSNICLDRKGEDMVISGVVRDTEGRPIANAKIDVWQTNDDGFYDVQQKGLQPDFNLRGVFRTDEAGRYWFRAVKPRFYPIPDDGPVGQLLGKLGRHPYRPAHLHFIISADGFETLTTHIFDPDDRYIDSDAVFGVKKSLLAKFDRIDDRSRAEQLAFTNPFWETTFDFVLAR

>BRADO2273_UniProt_A4YQD2
MHITLQHLRIFEAVSRHGAITRAASELHLTQPAVSMQCKQLEDQIGLPLIEQIGKKLQLTEAGRELLVHAQRIAAQMTELKAAMDQFRGLERGVLRLAVVSSANYFLPPVIAAFTQRHPGVRVSLRVVNRDAVLAALADNQTDLAITGQPPDSADIVSHYFMDNPLVVVAPPGHPQAGRGTIDIAALADETLVLREPGSGTRATVERYLADHNVTFRPGCELSTNEAVKQAVQAGLGIGIVPAQTIELEVETGRLVILPVEGFPLNRRWFMLHRRDKRLSGAAEAFRDLLVRES

>BRADO2274_UniProt_A4YQD3
MAEKSYQAGVKEYRKTYWTPEYVPLDTDLLAVFKIVAQAGVPREEAAAAVAAESSTGTWTTVWTDLLTDLDYYKGRAYRIEPVPGDDNAFYAFIAYPIDLFEEGSVVNVLTSLVGNVFGFKAVRSLRLEDIRFPLAYVKTCGGPPNGIQLERDRLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFMRWQHRFEFVMEAVHKATSETGERKGHYLNVTAPTPEEMYKRAEFAKSLGAPIIMHDFLTAGFTANTGLANWCRENGMLLHIHRAMHAVLDRNPMHGIHFRVLTKCLRLSGGDHLHSGTVVGKLEGDREATIGWVDLMREPFVPENRARGIFFDQDWGAMPGVMPVASGGIHVWHMPALTAIFGDDACFQFGGGTLGHPWGNAAGAHANRVALEACVEARNQGRPVEREGREILTEAAQHSPELKIAMETWKEIKFEFDVVDKLDTGPMLRVVNA

>BRADO2275_UniProt_A4YQD4
MSEAVAYKSAERRGETFSYLPPMTQDRLRRNIAYLIAQNWNPAIEHTEPEKSMSSFWYLWKLPMFGERSIERILGELEACHRTNPGHHVRLIGYDNYSQSQGTAFIVYRAGGR

>BRADO2276_UniProt_A4YQD5
MQRRRLLSGGKKALQAGTAALPAAMAREIEPPAPVPPTRERPRSYVPKVTESDTQGGQRVTGRNIGYGGRITGDAQGAHHVVSGTQYLGPSSGAASGPAAAKVGLSRTGNGLVVSGTLTRSAVAITGDEPGRGLTITGEVEQGPEDDLTRRPAPMATRGSRQRQRPPRVEITDSGQPVTGGSPGCSSRLTGDDVAAAGHQVTGVQHLTRAGAPPAAAARSKVAVAQSWGGQRITGPDVEHHHRVTGDAPAAALLLTGNQYQGPATAAQWAEPDAAARWQRRTASTLVTGDTPRHDRSVTGTARGAMRDITGTPYGHAESVGAGDAVGAISLDAISQRFSIRSPQRDAQLRAGASDPVTSSGRITGAFAAGGSKVTGNLEFSGRSRLRQAGDTAGHSRLTGEGISHGVVTGDAWSDTSRVTGTEGAFTVERNPSERGPRAKPFAGAVNFKQKATREEARQLVTGMFGYFSKTGARVTLSGGAQS

>BRADO2277_UniProt_A4YQD6
MRGPALYAARRASVGPHHRLRIQPRGWDGLSLADDAPIARYHPLADRAISQALRRRADEIEAAFGEIAPTLQELAPRQFAPEFAQVAAETMRARLKLEIPHAALTASWTAPLDMRALHARCVLGTFCRLIERAFDRGLANLSDGEPADALICRWGFHAVDITPCADGRLSGVTDYILRVPSSIVAFRESYAGAMFDVDNAVRHWESVELRRWRDAWPNAADAPTRYLKIGVYHYSSVAPQHEGCAAHGSDETRAASALLERLNAFEQAVRALHGAPASVATLLVGVDTDTDAIRVHVPDASGRMDIRRHVDSGSLYDATSRLPRESAKEAIRDAVAACAGASADDLETEGMRWFCGYLLKNNIGQVEAVRDWHQGRYADAGHTERLIVVGDPVDDVQLRNLAFQAQMRTVEEGADDLDVGIRILRAHHAPHRLPVPVLVHIRFDPRIPGAFAAAGQHARRLAAAITARHGVLAAQGELVVAAVVRAADGSVLTPIDLTASQDDAPPEAHR

>BRADO2278_UniProt_A4YQD7
MKICQVEGTLVATARIPGLLNRRLLVVKERGSSAKQVAVDPVGCKPGDWVIAVGSSAARDAAGSKDFPSDLTIVGIIDFWDDPAGRAAQKVVANAD

>BRADO2279_UniProt_A4YQD8
MQISRVVRDLVTTKRVFWLASKSLRVVEDPAGNLDVVVDPIGTKPGDYVITIGYSAARAAAGNPNITTDLTIGGIIDDWSEELWRA

>BRADO2280_UniProt_A4YQD9
MIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLAAAHIIARPHIEVEHVLPRPGVTRLEDQSMPRIPAAE

>BRADO2281_UniProt_A4YQE0
MIETRGLVPAIEAADAMTKASEVRLIGRQFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLAAAHIIARPHSEVEHILPLYPQGELLSDEVAAQ

>BRADO2282_UniProt_A4YQE1
MSQPPSLFRRYEFASYAQTREFLDALAVLSEETRLFPDLGFARTFVNITLRGRDGGVPGPAEIDYARRAAVLAAAWTIR

>BRADO2283_UniProt_A4YQE2
MSPPLIDVAVAVVQEPSGRVLLAERTARQVAAGFWELPGGKIEPGEAAAEAAARELSEEIGIHATGLRPWLCYVHAFPTKRVRLHIHRVESWRGTPHGREGQRLAWVDPAAPSVAPVLPSNGRAMSALGLPRLLACIDVNDVSGAVAAARAARDRGAGLIIVRAPQCAPGQRVALARRIIAAAADLRVLLEGPALEAQRAGAHGAFVGPANLRRSTVRPNLPLWGAACSDSNDLVLAAHLGADFAIATPAHPASSRTPHFTMFRTDDTAAPLPLFKTADKTIRDTSRPS

>BRADO2284_UniProt_A4YQE3
MMTSSLWLAISGPGALLAASLVPAIHPTISHPSMNRLAGLASGLACAVAFVTALQVGISGPLYTPSLAINGVGLGLYLDSVSATMFCLVSFIGVIVLRYSFTYMDGDPGQIRFIRLMCLTLAAVLTLAISGNLLQFTLAWSATSLALHRLLVFYAERPAAVIAARKKFIASRLGDLFLVTAMVLLYAAFGSLDYQTMFSAAKAMRAQETVPLGIQIAAVLMVFAGLLKSAQFPLHGWLIEVMETPTPVSALLHAGIINAGGFLVLRFTDVVTLSLASLDLLAVVGGFTALFGSVVMLTQTSIKVSLAWSTIAQMGFMMLECGLGAFAAALLHIVAHSLYKAHAFLSSGSVIDIARASWTPSPGGKPHPFRLIISIIGVLLVTLLFSLLTGATPARQPGVFALGAVLLLGMIHLVANGIDERPNAYVVLRTLLLAAVVAGAYFGLQLVAEQLFAAALPKLEAMRGPIGIVIVALVVLSFAAVTFLQGLVPKQATEPRWQALYVHVANGFYVNTIANRLVLQYWPGPAPKPAPIALPIVLREPT

>BRADO2285_UniProt_A4YQE4
MIECDAPAVALAPTPALHAAIAGACRRIAPLWPLKNFVAVNPFMGFSGQSFHATCATLHRVARLETLMPRAFYREAIRSGTIERADLAAALAAAPADWCLPTEVGELLKLADNDKTVRKHPAVVATVAEVLTELAAGDRHVARTAFMTDEISRWCAAYFDEGQSVWRMPARGLRPYAAWRASVRYDRNPEAMGIARFRELVAELPEDYVAAIATVVDRLGVPARAIEDYLHQALLEIGGWAAYARYLMWDHELAGDRDDTLEQLLAIRVVWGYALFVQRTDAEFREAWRRAMEQAALPPLDDKLGGDPDLCINMVLQEAYEIAFRRRLLHRLGQSPAAQASGARPAVQAAFCIDVRSEVYRRAMESISSAVETIGFAGFFGFPIEFVPIGHITGRAHCPVLLRPQFTVCEAVDGTSEDEDSEILVMRLLRRRVRKAWKSFKLSAVSSFIYVETAGLLFAGKILSDSLAVTRTVHDPNTDGLDDAVIGRLGPRISPRLVGGRATGFDQAQRVAMAEAVLRAMSMTGPFARLVMLTGHGSTSVNNPHAAGLDCGACGGNTGEANARVAAAILNDSDVRAGLRDRGIDIPEDTFFLGCLHDTTTDEIKLYDLERLPASHREDLRVLRELLAKATSLTRLERATLLGVAGRADAEQRVVTRSRDWAQVRPEWGLAGNASFIAAPRARTRGIDLGGRAFLHEYDWRQDKDFATLQLIMTAPMVVASWINLQYYGSTVNNAAFGAGNKVLHNVAGTIGVLEGNAGDLKVGLPWQSVHDGTRFVHEPLRLAVLIEAPLEAIGRVIAQNSGVRELVDNAWLHLYAISGQGRVSHRYRSGLQWQAIDPQS

>BRADO2286_UniProt_A4YQE5
MAKSATPSRSKPSDAVQDASARPPRQVPASDAPLGLVASHLLRLWQQPSTRGVVFLSSDEARAERIAAVLHAMDPDCGVLVLPRFDTVPFDDAAPSRELSGRRAHVLRRLAEHARHPLLISTVEAVLPLVPPQRCWTAASLHLKAGQPIDLEGFRNSLAKLGYATDEPPDDPGSVLFHGQTTELFPAGALGPVRINHADGMISDIHFFDLGHQNAVVAAETLVIDPMSERSVGGEALVDLFTYLDGSEIIVDSTVPDHAEMRLAALDESDVDKERRKRAFVDRSTWRHALRLATVLPAKGHSEPIPVFAQQRSARATLRRFIESARQRGARILFTAATERDLQGMERVAGEKAERRKNWAAATRARDGAITSLLIDLDRGFTTGTRRPLIVITAAEVLGSRARHLLPMARQAAVAGITIPVPGSAIIHLQRGLALLDGLELISAPNVSARDMIRLVFANDEAILVPIADLGLIWPYAGDPSGVKLDDADGRSWAARCLRAEDEIDRTAVRLSDQIRARRRAEAPRIVAPAVEYERFVARFPYLVTPDQAAAIEDVLKDLGAGHPMDRIVCGDVGFGKTEIALRAAAATVFAGRQVALIVPTTVLAAQHVQTFVKRFAPFGISVGHLSRLSTTADARSTRRQLADGTLKLVIGTTALAADDVRFADLGLVIVDEEQHFGAADKARLSALRAGVHALTMSATPIPRTMAGAMAGLRDLSIIATPPVRRRPVLTKVEPLLDATLSMALRREHRRGGQSFVICPRIKDLAPMRERLSHLVPELGIAMIHGRMPAREIDAEMMRFVAGKADILLATNIVENGLDIPRANTILISGAEHFGLSQLHQLRGRVGRGGIRAYAYLLADTPGDAAQKRLSALQELHFAGAGFQISARDLDLRGAGDLLSEQQAGHVQVFGPALYQELLSRALQGRPHRAAEFWLPELRIDRPAFLPSDYVQDQVTRLDVYARLAHAETVADIDDIEDDMQLRFGHPPQEASNLIASARIRLDCHALGIARLDVGTEGIAARLRPAATAGTPRPGRPRSRLVYKHKIRPDRILTAAIRFLAALKRDASNKQGQPTSRQRSRGRASPVGDSP

>BRADO2287_UniProt_A4YQE6
MSSQPFARRSILIVEDEYFLADDFAAAFRRLGADVIGPMCDIDEAQVLLRSGQPVDAAVLDINVRTEMIFPVARMLRERNIPFVFTTGYDKASILPEFADVPHWEKPVDVMSVANVLATMVGAR

>BRADO2288_UniProt_A4YQE7
MDGPIMLGRRRQENMVRDAVGPLFRSAALQDGPRVIGIVLRRLLSDGTAGLNAMKRAAAEWRRSRHHRTCLLMRCCGLR

>BRADO2289_UniProt_A4YQE8
MPSVPHDDADQTEAEIRSEQMQLQKAIASISDGRIRLRHQERRVADMHEPGTGTAGCRTRDEAERLATLMRGSLEQWERHRALIEQRLAYLHVRRARAEALTGNVAPSLARSVCASGLVAGQLDELDARRAPGEYAVMSVREVPDAAGRE

>BRADO2290_UniProt_A4YQE9
MQRDMATGGVSQSGDKKRRPLVIGVGASTSHTESLARFLSRAALDQDLAIVLVLRHREGLDEEWLRQVLQPLENVRLRALEDGAEIEGQVIYLCPPDMIATLHDNRAVLRQSPQAPGERATIDSLLVSLAEERAEQAIGVILAGTGGDGTLGVAALKDHGGLALAERPVGEEEEPQDSSRAAAIADFVLAAEDIPDHIQVYARHLRRLEDRQGFDEVLAAAATSLDRIADILRTKTGNDFHGYKQNTFLRRVQRRMQVAQIGDVSAYVDFLRNDKDEVQHLFNDLLIGVTEFFRDRREFEVLEQDVIPQIFAGRQRGHPIRVWVLGCATGEEAYSIAILLREHAARLDAPPPLQIFATDIDGKALAAARVGRYRTDIEANISPERLARWFVREGDTYCVVKELREMCIFSQHNVIKDAPFSKLDLVSCRNLLIYLNAELQNRVIPLFHFSLLPGRFLFLGNSENVTRHPKLFAPVDRRARIFRKLDGGSRLPPEFPISTAAGRATVDMPAIRPFNADVGLERKAQRIAERYAPAYVITDSNFQILHFSGRTGRFIEPTAGVATLDLLGLVHRDLRLELRTALGHARDFNQIVHADQVMLGVNGHTIGVDITVEPVEDSDNGHRNFVVLFKDGPLRPPATALASGSSALVRSEHVERLESELRATRERLQATIEELESTNEELKSSNEEYQSLNEELQSANEELETSREELQSVNEELTTVNGELAHRVQELTRATSDLKNFLESTQIATVFVDNDLRVMNFTPAITQVLHLVETDVGRPIAHIKARIPIKELYEDIRRVLRTLASAERELIAPDSGTRFIVRMLPYRSVDNFIAGVVMTFIDVTAITRAEERQRLLLAELQHRVRNTLGVVRSIARRSAQTSSTVEEYAAHLDGRLGALARTQAAVTRDPQAGVDLEYLLADELMAYKAREGEQVRISGPSMRLQPKAAETLSLAIHELATNAVKYGALSQPTGRIDISWHIDESVTPKELVFEWRERGGPEVKPSKRKGFGSEILERTLAFELKGRTQLSFNPAGMQFQIILPLSRSFVQGPATGQR

>BRADO2291_UniProt_A4YQF0
MLEQAVRGHILVAPAGQELAREGDAALSVLMMLSGWAARYKMLEDGRRQIVNLALPGDTCDAQVYFVKRLDHSIAALTPVSYAELDRERFESLIACDRRLAEAFWCETLSNAAIQREWTLNLGRRDAYERVAHLLCEVMTRLRTVGLIDGASCTFPITQTDLADATGLSVVHVNRTLQELRSAGLIVLRDRTLTVPDFKALMEAAMFDPEYLHYGSPHDASPG

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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