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BMC type: CsomeACh


Organism: Acidithiobacillus ferrivorans SS3. Bacteria; Proteobacteria; Acidithiobacillia; Acidithiobacillales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

                       Acife_3126 (fasta)
                             Acife_3127 (fasta)
                                        Acife_3128 (fasta)
                                                Acife_3131 (fasta)
                                                                Acife_3132 (fasta)
                                                                     Acife_3133 (fasta)
                                                                      Acife_3134 (fasta)
                                                                          Acife_3135 (fasta)
                                                                           Acife_3136 (fasta)
                                                                              Acife_3137 (fasta)
                                                                                Acife_3138 (fasta) H_hotpink CsomeACh (HMM details)
                                                                                  Acife_3139 (fasta) H_hotpink CsomeACh (HMM details)
                                                                                   Acife_3140 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                    Acife_3141 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                               Acife_3142 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)
                                                                                                               Acife_3143 (fasta) HMMcsoS2_2_ACh CsomeACh (HMM details)
                                                                                                                 Acife_3144 (fasta) HMMrbcS_1_CsomeA CsomeACh (HMM details)
                                                                                                                          Acife_3145 (fasta) HMMrbcL_1_Csome CsomeACh (HMM details)
                                                                                                                                Acife_3146 (fasta) HMMreg00126_1_mix CsomeACh (HMM details)
                                                                                                                                 Acife_3147 (fasta)
                                                                                                                                     Acife_3148 (fasta)
                                                                                                                                              Acife_3149 (fasta)
                                                                                                                                                    Acife_3150 (fasta)
                                                                                                                                                                Acife_3151 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      2x H_hotpink

BMC-P(map on tree)

      2x P_neonPurple

(complete list of loci)

Protein sequences:

>Acife_3126_UniProt_G0JL81
MGGRMDNKLTLGDRLNVRSMIYVASEPIPRFWPMRTFIHHNPLFGLEHLSFEAAIEEANTLFHGRGYLSRSQYQEYRLAGKVDDAKLEKYLDDFLSALPGVLPGVALRKWLWSLLTVCQSEQVVPKTDWLNGQLLHDVLHGQSTTMDRDTQQLQLGVILAHKIAPDGPVYANIDRLFGTDIGQTLDELLIKSCLDFFDEGQSAWQAPGRNQGFFAAWKEVAQHNVRFFLRGLQLRQLLESEETPEGMVAHILKRLKVPEESWQRYITRQLTRLHGWAGFIRFRSSARHYYWAEQFPADLTDFLAVRMVLGMALLQEAVRHHDCPANAEAVQAFVHADPLGAYLRLELHTGSILPAWAHRVEDVLARRRRPSFAKLAHAYMDNKSRWEGERQASHLRRLAATMGGDAEAELMAMTPAQLDEFMEVVRNWEKGEGFVWLRSMEMHYIKALINRVNIPKASAPPVDKRPFAQAMLCIDVRSEPMRRHLEAIGDYETFGIGGFFGVPISFLGYGKGTEVHLCPAIQTPKNLILEIPVALELEEEPLYGALEHVLHDLKGSVLSPFVAVEAVGLIFSLGLIGKTVAPLTYHQLHDRLHADKPVTRLLLDKLSHDQADSILRAVQRAMIVRALIKEWNIPRDQVTDDDVRQLREIALENAQGPSDLAQRRHISDQDETAFIQKLRDIYRVERHEMSLQMERLGRIGFSVDEQVRYISQSLLLVGLIRNFSRFVLMVAHESQTQNNPYESALDCGACGGGKGLPNARVFAAMANKPEVRRRLRDLGIVIPEDSWFMPAVHNTTTDAVELMDIDLLPARHLLYLERLRNGLSAASRRSAAERMPTLGGPGRLAEEPYAAAMMARRQAHDWSQVRPEWGLTRNVYAIVGKRALTEGLDLESRAFLHSYDYRLDPKGRLLETILSSPMVVGEWINLEHYFSVVDTEHYGSGSKAYHNVAGRFAVMTGNQSDLRTGLPTQTVLKDGKPYHEPVRLIVLVEAPLSFVQKAVGNLVKIKALVGGAWVRVIIMDPEDAYRAYVLDDGAFRLQERSELSMSQPLMEDIA

>Acife_3127_UniProt_G0JL82
MDILIWIMAGTLLPWFPLSWIFNKLLASAPGFWAQALAILVFPQLGLLLLIHSGAWQALPVGLDPNLRVVALFTAVFYAFRAASTREVQVWARLMTTSGLALTWLLHGQNLDPLILQSVALAWSIPGALMLVWAGLLKQRMGGAYLGLTGGLATVLPRLSALVTLTALAASATPIFPNFFILLHVVKALPLLWIPGGLLVLLLWGWAVGRFLQDLLFGIYRGELLEDLTVGGTWLGGLVLGLFAVGGIFWGGAWIIN

>Acife_3128_UniProt_G0JL83
MEILTIITPFLLVLSAIIISLFLRSKRRISARVSVIATLVTFFLSLVMLGYYVVAGHSQVVHIGIHWGSIWLDPLSLIMWVFVSGISLLVHIYSVRYMVEEPNYTRFFALLDLMTAIILFMVSAADLVTLLVAWFLVGVVLYFLLGHDTNRPAAGRYAFWTQITYRAGDLPLWFAAFVLIKTYHSISLPVIFAQIQINPHLHAFWGLSIPELVGFLLAFAAFARSAQFLLHGWLPYTMDGPTPVSALMHAGIVNAGGFLFNRFAPVFEYAGGALHMAFIVGLVTAIIGSAMMLIQNDVKRSLGYSTMGQMGFMVMECGVGAFPLAIFHLIAHGFFKGSMFLGAGNVIGEARAHDGVPPDPIYTAIVERRPAKPSRLPWLAAAALTILVPVAVLTLSHFFVSSELLYEQGVIILLFFGWVTGAQALFATHKMTHTNPWRLMGGILGSFVLVVIGYTLISHYFGSFLYPHGVSQKLYAAASINAFAFDALVIILAFLFVGGWALTFFADSSGWWDRVDKGRRRGAYLSMYALLSRELYVNDLYARLTQLLLVFSHRLNILLRWC

>Acife_3131_UniProt_G0JL84
MPLVHMKDLLNHAYAHGYAVGAFDVVSLEFVEGVMAAAERSRAPVILSLAESHLEHYDFELLMSGVEAAARRSAVPVALHFDRGANLEAAVRAIRLGCNGVMVDASQSTFSDNLTHTKTVVEMAHACGVPVEGDLGYIPDAEDIDAQRRPATLPYTTVAEAKGFVERTGVDFLVVSIRAEQICPNGKAKLDIQRLRSINQALGIPLAIHCRTRLDDDQFRRLIVHGVAKINYFTALAEAANAAILARARSAPGAGYLDLVQDVGAAISAEAERCMRVWGAAGRAAEVLACCRPWAPVEHLIIHNVIGISEKEVTAMMIEGQQTLSSIPGVRSVITGKAMRERAQYRYCWRVRFAAPEVINSYHEHPDYVAFTNRRFRPVADREISIDYAMECL

>Acife_3132_UniProt_G0JL85
MAVELEKYQDILAELGEHASEVLRASWDEAARVFTPRGLENDYLNGATSLKSLGRGTDLVVSFIQSAPAVARELGEDAVHDMLAAGIKMYSKTSATVIAAMFSSSPVAAVRLGDPELFRAYLHLLDTLLAQAPRGVRPMLDHLSILLGQLTLGGLRRWALWGAQAHKTDFDGQAKYFALESPESMGVLQKERKGTLFIDVQRRIGMYLRALWGRDFFMRPTSGDFERREGYRPSIEGYIIHLPDAYDDLLWRAPSGEEMRISGIELYRASAAHAACHQVYTTHQFDSTGLTAMQVTLVGLVEDARVEAIALKQFPGLGQIWLPLHTATPASGNDAAPLMARLARALLDPEYSDEHPWVAMGRQMFSGQQDRLGSTEWAREVGLHFAAEMQQLGVVYSGSSGLPDIPYRDDNRYMWEFEDVREVGQVIAGVTTQQIRKYVSVMEMVNAIDVPGAGDDANEIWVLSSEFFRDEEPTSLNQQEGREPPPEPYHYPEWDYQMQLERPDWCTVLEKRAKSGALEIIDEIVAKHKPVIGRLKYLIEALQPQGVQRLRKQEDGDEIDLNAAVRAMIEMRMGEQPDLRIMMRNVRKVRDLSVLLLIDLSESTNDPVQGSESTVLQLAREATVLLADALNKIGDPFAIHGFDSNGRHDVEYFRYKDFGAAYNDRAKARLAGMSGQLSTRMGAAIRHAGSILKRQPSNKKLLLVITDGEPADNDVRDPQYLRYDAKKAVEELTQIGISPYCLSLDPRADQYVSRIFGANNYVVLDQVQRLPEKLPMFYMGLTR

>Acife_3133_UniProt_G0JL86
MSPEIDPYLVQDMPYYRAVADEVELYEAAYSVRMPMMLKGPTGCGKTRFVEYMAWKLGKPLITVACNEDMTASDLVGRFLLDASGTRWQDGPLAIAARFGAICYLDEVVEARQDTTVVIHPLTDARRVLPLEKKGELVQAHPDFQMVISYNPGYQSLMKDLKQSTKQRFGALDFSYPAHAIETEIVAHETSVGVEIAGKLVSIAERARNLKGHGLDEGISTRMLIYAGSLITQGVEPLAACRMTLVRPITDDPDMRDALDAAVSTFF

>Acife_3134_UniProt_G0JL87
MPVKKLGSKLAQGVRQVQAQQVDTPSPTPEACASAAPDDQAKGSSTAHPDEKPPLSPRASGDERSSTPRSEGHKNLHPRRVWPD

>Acife_3135_UniProt_G0JL88
MADRIIAVINQKGGTGKTTLALNLAAGLARRAATHLVDADPQGSISQWVAMAAAHTGLPPVAQPGADPFATIAQLACTHRYVVVDCPPAIQGDLVAAVMRSVQVILIPVLPSPIDLWASVGMAAALGEAQRLNPDLRAGLVLNQLESRNALSRAMREALAEFDIPILQAGMQRRAAYRSAAVEGTSVYGLGKRAQAAVADMEAIIEEVLCL

>Acife_3136_UniProt_G0JL89
MNAGTNPSAAASGPQERLSTLNWRFEFGNYAATRHFLDQMADLSKREDYYPNVSFGKTYVNISIDAEGQAALAERNSSFMGEMKALATADRA

>Acife_3137_UniProt_G0JL90
MANDPRMMGYLMRALSAEMAAVQQYLTQASLTAMWQLGAPSSRFRRDAEEELGHAQRLIERMLVLGIPSNGTQLPPIRPGRSLEEMLLIDRELEIEVIRLYEEAANYCARVRAAETQTLFADLLQEELGHLHDLDGMLIEMHQGETS

>Acife_3138_UniProt_G0JL91
MANVSGVALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPDAGDSGLDGVVSQSLS

>Acife_3139_UniProt_G0JL92
MANVSGVALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPNSPVE

>Acife_3140_UniProt_G0JL93
MDIMRVVSDLVATRRIPGLQNASLRVLTDAKGRLSVAADPVGAPPGKWVIAVSGSAARYAAGDYRILTDLTIAGIIDHWDPSAGQTGN

>Acife_3141_UniProt_G0JL94
MKICQVEKTLVSTNRIKEMGHRPLLVVKEKGGARSIAVDAVGCVTGDWVICVGSSAAREAAGSKDFPSDLTIVGIIDHWSED

>Acife_3142_UniProt_G0JL95
MNTRNRPGRHLSPQPGANRPPYGLGTPASALQARPPSRAFASHELLHSPMHAANPACAMDQGRPCRHPLSNESENRRLLAHEQAIKGHFAAIIPALKRLAAQQHEADFPERAQRLADADLGFTLPAGILEDAWIAKLDMRALYGACVMHTIRLMAEQTQVAPPLQNSDEMSSFLLDCGYHAVDITPCSDGRLKGLIRYILRLPDDAVRSRKAYAGAMFDVEANVKRWIETELMRYREGHPVPADAGTRYLKIVVYHWSSSDPAHEGCAAHHSNERDAAEAGLGRLREFRQAIENSFCCGASVDTLLIGVDTDTDGIKVHVPDADGEMSLYRWVSNLTLYKETLNEDASTARLKVYQAIQAASATDGWGMGNGEPHEGMRRLIATLLINNLSQIEYVCGNWEGRYPDIGHNERFISVGDGFEEFQVRNLAYFVYLHTVEEGGPDLDVGIQIFNRINVLHGLPVPVAIHFRYDRRVPGSRERTVEHCQRVRAAIESRYAELHRQGLLVCGMTVQDKPSGSPIEALAADDGASALRSAR

>Acife_3143_UniProt_G0JL96
MSDSMANNMASPRSARAAALERRRALSHNGAAALGAKSSAPARVVGNTAAMAAPGATGKSLSRARREALSQGGGAIESPQSQSEVRTGIRVLAADLPTTTAPAEAVATAPSAASPDSCCCQGKATTEIAEREQLLEAVCALVDEDPTSVAGSSASAVRKLCQERRRALSRQGKMAEGPARTPVSRRPRNNSSSSAALGLSGRDAAQMRRDALCQQGRGDQPACRPSGRIRQKPAAPAKVEQGTTLSGTPVTGTQVERSTRVTGAEPGSCRAITGTEYIGIEQYGTLCAAIPEPAPAKVGVGRTARGQSVSGAEIGRSVKVTGDERGSCKAVTGTEYLSADKFESFCATRPALTPAKVGVAATEAGQRVSGTEVGRSARVTGDEPGSCRKLTGSQYYQPESFGSLCRDGGSAPHKVSVMSTLREQALTGTETAPGERVTGTERGVCASVTGTESAGLAQYQACNRKPVSVAEKVSVMRTWHEQPVSGTSVERSPKVTGDEYGGCQPVTGTEYAGPDQYVAFCAADHQTTARALMASRSGVASAMMTGIRLGPDSKVTGSARGEGLVLSGTPYGGEDQRALPNGDGTRMHPLTRGPVDALRMAVAAPEVAAVRGNFSVTTPARSAQGGALSRVTGTAYGAVGRITGPVNLAAGLVSGTPEFRYRDEAHGAAPVAAPLEAPRSRLTGDGREGGFAITGAAWRRNESITGTEGTSTRRNPTLRGDQRGTLVGAAQLKDRERPDLPISRVTGSSGNDAKGSSITYSGGARG

>Acife_3144_UniProt_G0JL97
MADIQDYNSTPKYETFSYLPAMGPEKMRRQIAYLISQGWNPGIEHVEPERASTYYWYMWKLPMFGEQSVDTVIAELEACHRAHPGHHVRLIGYDNYSQSQGSSFVVFRGR

>Acife_3145_UniProt_G0JL98
MAVKKYEAGVKDYRQTYWAPEYMPLDSDILACFKITPQPGVDREEAAAAVAAESSTGTWTTVWTDLLTDMDYYKGRAYRIEDVPGDDTCFYAFVAYPIDLFEEGSVVNVFTSLVGNVFGFKAVRALRLEDVRFPLAYVKTCNGPPHGIQVERDKMNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVADAIRTAEAETGERKGHYLNVTAPSPEEMYERAEFAKELNMPIIMHDFLTGGFCANTGLARWCRKNGILLHIHRAMHAVVDRNPHHGIHFRVLAKALRLSGGDHLHTGTVVGKLEGDRGATQGWVDLLRESFVPEDRSRGIFFDQDWGSMPGVFAVASGGIHVWHMPALLAIFGDDAIFQFGGGTLGHPWGNAAGAAANRVALEACVEARNEGRDLEREGKDILTNAAKDSPELKIALETWKEIKFEFDTVDKLDVVNR

>Acife_3146_UniProt_G0JL99
MICKFIKVKYIYYYDLLWFTVCMSIRHATLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFDQIGKKIYLTAAGEALTSACHDVLDRLEYFTQEIAALQGLEKGSLKVATLSTTKYFIPRMLGGFCTEHPGVASTLFIGNRETLLERLARNQDDLYILGQPPEHMHVVAESFADNPVVVVVRPDHPLMPEKDIEPSRLRDAPFILREPGSGTRLAAEKFFEQHGVVLRTRMEFGSNEAVKQSVAGGLGIAVLSASTIRAELANGELAILDVRGFPLERKWYAVYPAGKQLSPIVKAFMEYLFAASAHGENGPI

>Acife_3147_UniProt_G0JLA0
MKLSKTKAKAVKYFLFFSITPAAGVIIYFSFKFFGIDISFKYIIYLLMLILFVKLVVGGVVVTVLKNDKE

>Acife_3148_UniProt_G0JLA1
MQKTAWDSGTRLLHVGLSTTLTFELFDGFWVSDPNTRLYFIIHEWVGLLAATVLMVEWLWIYADGQSKILFPWNSNGRSVIKTDILALFKGKLPQAGRTVGLPGFWHGIGILSMTGLAITGVLIFLVIPGGRGASSSSAGATAFTTLSGVHREISYVAWVYWIGHVSAAIIHQVRGDPVFRAIFLGTTRLRK

>Acife_3149_UniProt_G0JLQ5
MITPQNALDGRERRSIIALAGIFGLRLLGLFLVLPVFSVYAHGLHGAIRHPILIGVALGAYGLTQAIFQIPFGRLSDKWGRKPVIAAGLLIFAIGSVIAAQATSIEWLLVGRIIQGAGAVAAAIIALTADLVREERWTKAMATIGITIGISFSVSLVLSAPLAQWIGVQGIFWLTAALSILAIGVLYKVIPDVPARFHRDAEMNPAALKDVLRNPNLLRLDFGIFSLHTGLTALFVVLPLVLIDPQHPLLSEADQWMLYLPVMLLSFVAMIPLIVIGEAKHRLREVFVLAIAILLAAVAWMALSNHSIWSIAIALFLFFVGFNVLEASLPSLVAKFCHPGAKGTATGVYTTAEFLGAFSGGLLGGLLYLPGQHNYSDVFWAVAAIYLIWLIVALTMQQPRYVATRIFPLPVDSQDNSQLTQQLLQLPGVVEVAIFPDENAVYCKVESKIYDDERVRSIIGYASQA

>Acife_3150_UniProt_G0JLQ6
MELSAWFHRSFEPHHEGPGLILLGAGVGLLTGLGAVLFHYLIAGIHNAAILGTFGIAQNAREHTPVSPWGAWIILVPVIGALLVTVLVRNFAPEAQGAGVSQILRAVHADRGHMRPVIAIIRPVATAITIGTGGSAGREGPAMQFGAAIGALVGHLFRVPDHRRIHLLGCGVGAGIAAVFNAPLGGWFLAMEVIVPDWRPWTVLSTLVATVSASWVTQEVFGSGHLLAHAYISHWNGSLMLPTLNYHVLLPAMVTALTAFAVRRVFLQDSIYTLPLHREGLPVPENHYIVEEKMDDK

>Acife_3151_UniProt_G0JLQ7
MVNGASLPANMDTLVMERNVRGWQGAFRTNPAFHLILAFFVGIVAGLGAVVFRRLIGLMHNAFFFGQISSRFDDLQHSAASFWGLGVVLVPVFGGLVVVWLVRTFAPEAKGHGVPEVMDAIYYGSGVIRPVVVLVKALASSISIGSGGSVGREGPIIQIGAAFGSSLAQWLRLQEWQRLGLIAAGAGAGIAATFNTPVGGILFAIELMLVEVSARTLVPVMIATGTAAFVSRLFLGNYPSFIISQHMINQTLHQRAGAYGAYVLLGLLTGGAGLLFTSCLYWTEDRFEHWIKNPYARHAAGMLGVGLILYFMIIFTGHYYVEGVGYATVQDILDGVITQPVFLLLLLLLKILTFSVTLGSGGSGGVFSPALYVGAVLGGLYAVIANHLLPGIEVSMTIAAALGMAGMVAASTGAAVTGAVMIFEMTSDYHIIIPLIIVASLAFGVRRLITRETIYTRKLIRRGHFIPEARHSNLYLMRPAGEFIETPLIRVKGSRTLADIAVLLHRGREIPHILIVEGTQPRAVLTAPRVRELLRHRQTSTPIENFASEDWFSVPVDYQIYDLVARFRATHQECALLCRIDPPEHHEDVIAIVTIEDVLAYTSLPMRLLRPHTAQ

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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