BMC type: CsomeACh


Organism: Thiomicrospira sp. WB1. Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

   AVO41_08075 (fasta)
                     AVO41_08080 (fasta)
                          AVO41_08085 (fasta) HMMnopfamclust3_1 PVM (HMM details)
                                  AVO41_08090 (fasta)
                                        AVO41_08095 (fasta)
                                         AVO41_08100 (fasta)
                                                  AVO41_08110 (fasta) HMMrbcL_1_Csome CsomeACh (HMM details)
                                                    AVO41_08115 (fasta) HMMrbcS_1_CsomeA CsomeACh (HMM details)
                                                                   AVO41_08120 (fasta) HMMcsoS2_2_ACh CsomeACh (HMM details)
                                                                             AVO41_08125 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)
                                                                              AVO41_08130 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                               AVO41_08135 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                 AVO41_08140 (fasta) H_greenApple CsomeACy (HMM details)
                                                                                   AVO41_08145 (fasta) H_greenApple CsomeACy (HMM details)
                                                                                     AVO41_08150 (fasta) H_greenApple CsomeACy (HMM details)
                                                                                        AVO41_08155 (fasta)
                                                                                         AVO41_08160 (fasta)
                                                                                                AVO41_08165 (fasta)
                                                                                                  AVO41_08170 (fasta)
                                                                                                        AVO41_08175 (fasta) HMMreg00126_1_mix CsomeACh (HMM details)
                                                                                                            AVO41_08180 (fasta) Tdp_electricPink CsomeACh (HMM details)
                                                                                                                AVO41_08185 (fasta)
                                                                                                                      AVO41_08190 (fasta)
                                                                                                                           AVO41_08195 (fasta)
                                                                                                                             AVO41_08200 (fasta)
                                                                                                                               AVO41_08205 (fasta)
                                                                                                                                 AVO41_08210 (fasta)
                                                                                                                                    AVO41_08215 (fasta)
                                                                                                                                         AVO41_08220 (fasta)
                                                                                                                                            AVO41_08225 (fasta)
                                                                                                                                                            AVO41_08230 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      3x H_greenApple

BMC-P(map on tree)

      2x P_neonPurple

BMC-Tdp(map on tree)

       Tdp_electricPink

(complete list of loci)

Protein sequences:

>AVO41_08075_UniProt_A0A0X3T8E6
MRIMSDNKMLTAYRHLLEQAKESIWKAEFKSWDALKKAVWEFEREGSHLQALSQKQWQQVQEDVEADIDQLAEYLEEFNQGVESFLEMDLPLIESYLEEKALSLSDPTEIMILRLRLNAALKDVNKAANDD

>AVO41_08080_UniProt_A0A0X3T6N8
MPTDSDTSHTYQPKQIEQAVQSLWAEQRAFDVTEDPSREKFYCLSMFPYPSGKLHMGHVRNYTLGDVVARYQRLQGKNVLQPMGWDAFGLPAENAAMDHQVAPAKWTYQNIDTMRDQLKSLGLGYDWSREVATCHPEYYRWEQWLFTRLMAKGLVYRKLSTVNWDPVDQTVLANEQVIDGKGWRSGAPIERKEIAQWFLRITDYAEELLKDLDQLEGWPEQVKTMQKNWIGKSTGLQIEFPIESGLDKSQGNLKVYTTRPDTLMGVTYLAVAADHPWAQKAAIQNEPLERFIEECSHVSTAEADMEKMEKRGMDTGIRVRHPITDEVLPVYAANFVLMSYGTGAVMSVPAHDQRDYEFAKKYDLPMKAVIAPKGESQPDISEQAFTEKGVLVNSGAFDGLKSKQALHEMGKVLGEKGLGEKQTNYRLRDWGISRQRYWGCPIPVIYCPACGALPVPEADLPVRLPEEVVPDGSGSPLAKMDAFKNCACPQCGGAAKRETDTFDTFFESSWYHARYTSKDNDQAMLDERADHWLPVDQYIGGIEHAILHLLYARFFHKLMRDEGLVSSSEPFKNLLTQGMVLAGSWYRQDDSGKQIWFSPLDVEPVTDDKGAIVKGRLKSDGSEVQYGGVIKMSKSKNNGMDPQVLMEKYGADTLRLYMMFAAPPEQTLEWSDSSVEGAHRFISRLWRLVHSHAQTGLAAPCTNQDGLDKSQKALRLKLHTTIQKVTDDMGRRLHFNTAIAAMMELVNDLARFEDDSAQGRALMQEALEALVIMLSPVIPHAGQQLWEILGHGQSDGLLLDAAWPHVDDDALVKDEMDIMVQVNGKLRGQIEVDKDAEQSAIIAEAKTEERVAKHLEGKELVKEIYVPGRLVNLVVKG

>AVO41_08085_UniProt_A0A0X3T6X0
MARLANAILITGAAQRIGLDLAKRFLAQGEAVLFTYRTHKPGVEQLLNAGAIGYQVDFTDAEAVTVFTRWLASQVTSLRAVIHNASLWKKESSLTGVADLEALWAVHVRAPYQINQACLPLLRQCSQRADVIAISDAKASRGHPDYTAYLASKAGLESMIRSLARDWAPQIKCNTLAPGLVIFNQGDSESLKQTRLAENAIPEPIGLAQIWQSVSYLMQSPAVTGTRLEVGQLQRECFSSQSD

>AVO41_08090_UniProt_A0A0X3T6R6
MHYKNFTAYQHGTEPAVGVLLTNLGTPDAPTKAALKPYLKEFLEDPRVVEPPPARWLWKLILNAIILNTRPAKSAEAYQEVWGHYGDGSPLLDIGNKQLEAVKTSVSQHFQGRVEFALGMRYGNPSIPDALKSLQERHVQKLVVLPMYPQYAGATTASTFDAVTDELRQWRWVPEFRFIKSYHKHPGYIKALANSIREHQAEHGQPDLLVMSYHGIPQRYYNNGDPYACECRATSRLVAEELGLSEDDYLVSFQSLFGKEEWIKPYTDATLKGLPEKGIKHVQVICPGFSADCLETIEEIDQENREYFEEAGGEQYSYIPALNFREDHTDMLAELVLQHTQGWPERDGFDAEAAKAERATQARRAQEVEQSLLDEFGEEIIYPQGKKHLG

>AVO41_08095_UniProt_A0A0X3T6S1
MSSPSEFPQVRLAVSDCLRGTECRYNGGHAQDDFLNHGLAPYAKFYPFCPEAPVLGTPRETIRIVNFDGEIRVRGTRTDTDVTQGIEDYNRKMIPKLLSQGVDGAVVKSRSPTCGMERIKFYRPTGEWFGSQDKMGQGLFTARLQREAPWLAVEEEGRLKDAWLRENFVMHVFTQARWREFVEAKPDVKALQTFHRQHKFLLQSKSEAIFREMGPVVAQATPQTLAHALTTYESLLHEALSQHSKRGAVINVLDHMFGFFKASLNAEEKAHYLETREEFRQGIVPMIAVIKVLQQFVRHYGSDYLSEQVFLHPYPAELALRSKVEAYR

>AVO41_08100_UniProt_A0A0X3TB03
MSDLTQGTVKWFNDEKGFGFIEQEGGKDVFVHFSAINGTGRKTLLEGQTVTMEVTQGQKGPQAENVSVV

>AVO41_08110_UniProt_A0A0X3T6P7
MANQTFDAGVKDYQLTYWVPDYVPLDTDLLACFKVVPQEGVPREEAAAAVAAESSTGTWTTVWTDLLTDMEYYKGRAYRIEDVPGDKEAFYAFIAYPLDLFEEGSVVNVLTSLVGNVFGFKAVRSLRLEDLRFPVAFIKTCMGPPSGIQVERDKLNKYGRPMLGATIKPKLGLSAKNYGRAVYECLRGGLDLTKDDENVNSQPFMRWQNRFEFVAEAVHKATDETGERKGHYLNVTAADSEQMIERAEFAKELGMPIIMHDFLTAGFTANTSLAKWCRNNGVLLHIHRAMHAVIDRNPRHGIHFRVLAKCLRLSGGDHLHTGTVVGKLEGDRASTLGFVDQLREAFVPEDRSRGVFFDQDWGSMPGVFAVASGGIHVWHMPALVNIFGDDSVLQFGGGTQGHPGGNAAGAAANRVALEACVKARNEGRDLEREGGDILRDAARHSKELATALETWKEIKFEFDTVDKLDA

>AVO41_08115_UniProt_A0A0X3T6S9
MSALHTDDYRTQYTLETFSFLPDLTADEIFDQVVYIINQGWTPSIEHDKPENAAAHYWGMWKLPFFGMRDPMEVLAEIEACRQAYPDHLIRLVGYDNYTQSQGHNFVVYRPRGM

>AVO41_08120_UniProt_A0A0X3T765
MSEQAIVSSGREKALARRKALIQGKAGAASRPSQAAPAQASTSDVSPSKVQATRPKASVAPSSVQPNGSGREASKARRDALIKGKSRGQASQSGQELEVDNMQATWHPKAKAKAMAKQAEQTLQTKQVEASDDAGTAKPDLGAMRPSASKDSRQKRVAQKAEASQQPQGRLMSKAYRQARSNGKSAEQAFRNKSGHSAAKARMANPDASSREIAKQVRAERCSKGKTACKASPRPRSEQPMKSKEAPSKVGESKTGGGQTMTGSQTGRSDSVTGVESGYCQKVSGTEYLGTEEFGQYCQTEYSSAPAKVSRSQTTRGQSVSGSSIGFGQGVTGNESGVCAGVTGTDYLPADQSDLFCNTGSAAKPQAPQKVTQSTTAKGTSLTGVNVSAVKPRDEDRARPTVTGEETGYCANVTGTGYQDSGSVREVCQMEPPAAANKVMYGQTSKGQSVSGDRAGGSSDMTGAEAGHCSAVTGTPYMDALETRKTCSTDDQAQMAQRQPQRSAFGGHAVSGVQPGPAGVTGGQKGACQTVSGTAYQGHDQTVAQCDVTAVAEPGDPDFPTVMQGNAVAVGQSESAPSQITGAFSSAQGKVTGDNENTTSRTIRPNRSPSQSPAARNAVASSVTGEGSDQGSSITGDSWGRGPRVSGTEGPWANNRNASIRGDQSQAFNHAADYRKTMGPEVDNSPITGSSGNTETGATVTLSGGARA

>AVO41_08125_UniProt_A0A0X3TE93
MFWRKVAAPVKTGATPGQMQKSSVTSVHSAPMGRSDHALVNTRRNQLLRDYELNTKAGFDDLEGILKRVASWQNEEDFVVKAQALVQSEFGWQWPESLLTDAWKTGLNVKALYAYGIFKQFERLSQDFYQLNPLQDEQEAVAKQAFMAAGFHAVGVAPCADGRLAHTVSYVLRLPHNMVRRKAHAGVMFDVSESVRHWVFVEHDRFREGIPNPATESTRYLKIAVYHYSDKDPNHQGCAAHGSDEKKAAAAALQRLEDFQQAIENRFGCGSRVEPMLLGLNTDNDSLKVHLPNQEGQLCLARYIKTETLFDQTAGWPADQARAYLKEAMQQLAEQAGSSAPNDSMQDLLAWLIEQNFSQIAYVRQYEKGLYADIGHAERFIGLGNGFEEVQLRNLSYYGFLDTLEEGAPDVDVGIKIFKGLNVHRGLPAPVIIRCDYDGRVPGSRTRALEKARRIEQALHQRYSELSEKGELTSLCTLRDHQRAVPCEMVSMRLSPTWAEQYEV

>AVO41_08130_UniProt_A0A0X3T8F6
MKIFKVIKTLVSTNRIATLEHKPLLVVTDKEGGTPQVAVDPVGCTPGDWVLCVGSSAARDASGVKGYPSDLTIVGIIDKWEPEA

>AVO41_08135_UniProt_A0A0X3T6Q0
MMIHQVKQTLVMTRRLEGLGQLSIKVLHSLNGETVVAMDPIGVKPGDWIFTIANSAARTAAGDDKLLTDLTIAGIIDRTSCDFLSA

>AVO41_08140_UniProt_A0A0X3T6X9
MSDNYGIALGMIETRGLVPAIEAADAMTKASEVRLVSRDFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLVAAHIIARPHKEVEPVLATIENK

>AVO41_08145_UniProt_A0A0X3T6S4
MSTEYGIALGMIETRGLVPAIEAADAMTKAAEVRLVSRDFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLVAAHIIARPHKEVEPVLATIEK

>AVO41_08150_UniProt_A0A0X3T6S8
MSTEYGIALGMIETRGLVPAIEAADAMTKAAEVRLVSRDFVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLVAAHIIARPHKEVEPVLTTK

>AVO41_08155_UniProt_A0A0X3TB11
MRAFSRTPGSVMPGIGQHPRYRQNQSMDPRILGFLGRAMSLEFSAGQHYMAQSSLAKQRQESQFADDFLALANEEFRHASMLTDRLVAHGALPSGSVLQPAMPAVDVVESLQTCAEHEAGLIDLYAQAQAWCANVGAQDDLALFTQLLQEEQAQLQRIQQWLAAYQPPMQQPMQAMNQNPRSFV

>AVO41_08160_UniProt_A0A0X3T6R7
MTLSDNSPWKVKQRPASMEAKFIFDSYEQLRTFLDDVAEQAEALSHHPNVSFGRDYASLVIYSQDGELTDLDYQLAERIEAGFQKVQQG

>AVO41_08165_UniProt_A0A0X3T6T6
MGLDSLLIPAVLFFLLGVIAQLVNSDLKFPEGMSKGMSLYLLMAIGLKGGAELANSDLFVAMNAIFWAIVLGFVIPIIGYALLRFRNKIDPMNAAAITAHYGSVSAGTFLTAIAFLEASGVTHESYPIIMMVMMESPAIIIGLVLAAMARKRLAADKIGADGTAAMGQAEAPKTDWGPLLKDAFTNGSVLLLLGALIIGAIVPPEAMKTLYPFTKEIFMGVLCLFLLEMGMVAAKRLDSFKKVGGTLIAFGIIMPLIGGFIGVFVGHSMLGFSVGGTLLVAILSASASYIAVPPVMRFGVPEANPSYYLALSLGITFPFNVVVGIPLFYQVSQWYVGG

>AVO41_08170_UniProt_A0A0X3T775
MTIPTCSEKMLQVIASTGLERRIKRILSETGVSGYTLFDVRGDGETGFHSSEIEGDGNVMFMIILPESKIEPVFEKLEVFEKQGHHLMVFASDVSVMTRSKFA

>AVO41_08175_UniProt_A0A0X3TE97
MAQEVPDYAQHHRLMRHTSLRQLQIFESVARNLSFTKAAEELHLTQPTVSAQIKGLSEAVEMPLYEQIGRSIYLTDVGREVALSCRAILNTFANLEMTLDDFRGKTRGRLRVAVVTTAKYFAPLALGEFCKDYPEIDIELSVANRENLYKRIENNLDDLYIVGQVPTTHLDLEIYPFAPNPLVPIAHREHPLVGKSRISLKRLAKEPFIMREPGSGIRSAIEGRFSQQKLSLNERLVLDSNEALKHAVAGGLGVSVVSQHALNLESEDGPLAILDVEGFPIEKEWNLVYPRGKSMSIISEAFFDFLRQKGTSYLRLKP

>AVO41_08180_UniProt_A0A0X3T8G7
MIELRTYVFLDSLQPQLAAYMGTASLGFLPVPGDTCLWMEVAPGMAVHRLSDIALKASNVHLGQQIVERAYGSMVIHHRNQSDVLTSGDQVLQYLQTEHTTRQACQIMWKEVIRGVTPDHATLINRDNRRGSMILPGQSMLIMECEPAGYIVHAANEAEKAANVTLVEARAVGAYGRLLMAGRDGDINEAVQAAERALNQINAEARVRPR

>AVO41_08185_UniProt_A0A0X3T6Q8
MSGQPWVLAGHNPHKHAAFHALADRWGLTLLPQSQFSLQSVEEDGLTFVENALKKARLASKVSGLPALADDSGLVIPALNGAPGLFSARYASQFNGQPSDDETNRQAVLEQMAGLPFGQRDAYMTTTLVWIHSPEDSEPKVVTCRWHGEILMQTRTRDGVGYDPIFWLPQHLKTPSEMTLNEKHRLDQRAKAFEQLMSLF

>AVO41_08190_UniProt_A0A0X3T6Y9
MLLSITGATLLLIVVFLLAVHIGFRAPRVPNVQSPKDFGMTYDDKTVEGENGCRLSAWWIPANEPSKVTVMLMHGWGANKSFMLPLAKLLHQRGMHSFLVDAHNHGDSDRRGVSTMPKFAEDLTSSVAWLRAEKPDASEQLILLGHSVGAAAALLAASNDERVNAVISLASFAHPKWVMQRQLRRIDWVPGLVWFVTRYVQWVIGHQLDDIAPLSSLKRLRCPALLVHGDRDQVVPITDHKQLCQAAGGDQFIQCAALAETDHASIEKIEYHFEEIDWFIQAIKLKLPQ

>AVO41_08195_UniProt_A0A0X3T6T1
MYNQLDWLLPWYIDDYVSIETHQQDQLDHRIERLITWHRTQQLPLYASLVKKLNHQIHDPTSPEQIESLLNELDALIDAIYLGIGEHLAPLLTTLSHEQKDDFIQNLTQRNIDYGEEYVNIGEAAARSMGAEKMTEMYDEWLGDVTQDQEAMIEDFTQSTDWMSPELLRAKQQWTEAMASTLKTLNSDQDQQLVALFDDRKRFWTQRLNQQFESNRSLLAQHLALIVASLTPEQQAHLSSRLGEYRSDFLALAKQSSE

>AVO41_08200_UniProt_A0A0X3T6U3
MLALPLQTRASSLQAGVDAFADKDYAQAFKIFKHRSLQGDAIAQFGLAKMYRQGLGMPTDFSKALKWYQKAAQQNYAVAMSHLGEMYEQGLGVQANTETARNWYRMACSNRCSDGCRHLKRLDQTIGH

>AVO41_08205_UniProt_A0A0X3TB21
MNPDKPPINLLGQPLALCCAEPVTGFFRDGFCKTNSLDQGSHVVCAQMTQDFLAFTQSRGNDLSTPRAEFDFPGLKPGDRWCLCALRWREAYEAGVAPPVYPESTHEKALKFIELEILQRHYVQ

>AVO41_08210_UniProt_A0A0X3T6S5
MIKVFYDGKCGMCSKEIRHYQAVAPGGVFDWVDITTLSLRRLDDEGLDRVEGLKHLHAKDEAGQMLTGVDAFLLIWQELARWRLFAKIIRLPGIYALTKRIYRLFARWRFHRLSHCQMAVKANNCHHT

>AVO41_08215_UniProt_A0A0X3T6U5
MNQTLYWLHDEHLAPPDEIEEGDRLVYIWDDTYFDTQAWSFKRLAFVYETLCSLECEIFQASTVQAIDELSTQSDISTIVTWQAQDPTLSHLIQATQRRHPKLQVRPNAPLVDLQIKPPVKRFFYYWKRVEKMLTGRQNPRTYRRVK

>AVO41_08220_UniProt_A0A0X3T785
MIKLKTDFETREALIAYLRQRRSHQKHEAVSAIKGGCKPMRSRLAEIDATRYAKTRNALTGAVTQLSPYFRHGILTEQDLLAYLNQATDADQATRLIQQLTWRSYFHQVHAAQPEHIWQDAEPYKTGWQAHDYDPTLPDDIAQGQTGIRLIDQLIRSLLKQGYLHNRGRLYLAAYVVHWRRVAWQAGARWFLQHLLDGDIASNNYSWQWVASTFSNKPYIFNLENARTFAGDALDCEHASNACFEATYDQLQAKLFPYQARGTKP

>AVO41_08225_UniProt_A0A0X3TEA6
MLSGLILVYFSNRWIEQRKAPDVSEISGGHDHSLNGGKNRCWRLLWRGEDLGTFITAAIAVHNISKGLAIALILVTRGMSVLKAAGWSIFSSLPQPIMAVPAFLFVTAFEPILPFRLGLAAGAMIWMVFAELLPVAHDKLKPSNIGVIVLLAFMSMLIFQLAIHH

>AVO41_08230_UniProt_A0A0X3T8H5
MKQNLWRLFVLIASVSLVLLLVSMHQLNKTVWDKAEMKMLAYAKIISSAGHEIFIGNEALLDILGSRLIENQYYKNIDYARSILRRTLENQPYVLAFGLLNPEGEYIAVSSNLENQPLPNLARQPQTAKNFELTLNSDRMIIGDAYIFKPLQQWIVPIRKALRNKEGEVIAVMAAALRLDDQALLNKVAISQDQLNAIIINERSGRRLMMSGISLSEGTHFYGYTYLTAEKKRFFDTQVQEKYNQSLAQKLQSEDPFVVTGISEKMGEEIIVGAQYDKDFDLIYAMYEPLKTYQNEITYGALKNFLIYLVLMMALWVIFRTIEKQETNIRKKLTFQAMQDSVADLPNRNYVDSVLKKEFEDNARQISVIYIDLDNFKNINDTFGHAMGDRFIASIAQVLKNNTGKLDHVVRFGADEFLVFTNQQDALRLAHFLQNCVSHPIDIDGNVFAVTASIGLAEYPQQASSLNELIGCADIAMQAAKKTKDAVIKFHPSMQDEVLNNALIELNMRKGLEKDEFFIQFQPQFKQNGSLCGFEALARWKNDELGLVPPDRFIRIAEESGFMPTLGEHLLHKTLQGISKIQAHFQSSLMFSINLSVRQLMVDGFNQRLMREVIARGINPAQLMLEVTESIFIQDKSFVHRTLSELKEASFKLSVDDFGTGYSSLSMLSEFPIDELKIDRSFVVNLKKQQNKELVSSIIMLGKHLGLHVISEGVEQRSEIDVLNTLGCDCYQGYYYSKPLSLSEILASNFATKND