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BMC type: CsomeACh


Organism: Acidithiobacillus ferrivorans. Bacteria; Proteobacteria; Acidithiobacillia; Acidithiobacillales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

                 AFERRI_370024 (fasta)
                     AFERRI_370025 (fasta)
                       AFERRI_370026 (fasta)
                                  AFERRI_370027 (fasta)
                                                        AFERRI_370028 (fasta)
                                                               AFERRI_370029 (fasta)
                                                                     AFERRI_370030 (fasta)
                                                                       AFERRI_370031 (fasta)
                                                                           AFERRI_370032 (fasta)
                                                                              AFERRI_370033 (fasta) H_hotpink CsomeACh (HMM details)
                                                                                AFERRI_370034 (fasta) H_hotpink CsomeACh (HMM details)
                                                                                  AFERRI_370035 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                    AFERRI_370036 (fasta) P_neonPurple CsomeACh (HMM details)
                                                                                                   AFERRI_370037 (fasta) HMMca_1_CsomeACh CsomeACh (HMM details)
                                                                                                                        AFERRI_370038 (fasta) HMMcsoS2_2_ACh CsomeACh (HMM details)
                                                                                                                           AFERRI_370039 (fasta) HMMrbcS_1_CsomeA CsomeACh (HMM details)
                                                                                                                                        AFERRI_370040 (fasta) HMMrbcL_1_Csome CsomeACh (HMM details)
                                                                                                                                                 AFERRI_370041 (fasta) HMMreg00126_1_mix CsomeACh (HMM details)
                                                                                                                                                  AFERRI_370042 (fasta)
                                                                                                                                                    AFERRI_370043 (fasta)
                                                                                                                                                             AFERRI_370044 (fasta)
                                                                                                                                                               AFERRI_370045 (fasta)
                                                                                                                                                                   AFERRI_370046 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      2x H_hotpink

BMC-P(map on tree)

      2x P_neonPurple

(complete list of loci)

Protein sequences:

>AFERRI_370024_UniProt_A0A060UN95
MEILTIITPFLPVLSAIIIFLFLRSKRIISARVSVIATLVTFFLALVMLGYYVVAGHSQVVHIGIHWGSIWLDPLSLIMWVFVSGISLLVHMYSVRYMVEEPNYTRFFALLDLMTAIILFMVSAADLVTLLVAWFLVGVVLYFLLGHDTNRPAAGRYAFWTQITYRAGDLPLWFAAFVLIKTYHSISLPVIFAQIQINPHLHAFWGLSIPELVGFLLAFAAFARSAQFLLHGWLPYTMDGPTPVSALMHAGIVNAGGFLFNRFAPVFEYAGGALHMAFIVGLVTAIIGSAMMLIQNDVKRSLGYSTMGQMGFMVMECGVGAFPLAIFHLIAHGFFKGSMFLGAGNVIGEARAHDGVPPDSIYTAIVERRPAKPSRLPWLAAAALTILVPVAVLTLSHFFVSSELLYEQGVIILLFFGWVTGAQALFATHKMTHTNPWRLMGGILGSFVLVVIGYTLISHYFGSFLYPHGVSQKLYAAASINAFAFDALVIFLAFLFVGGWALTFFADSSGWWDRVDKGRWRGAYLSMYALLSRELYVNDLYARLTQLLLVFSHRLNILLRWC

>AFERRI_370025_UniProt_A0A060UNR7
MKNHCGRILCKKINQKAFVEFCKFKDLDTSYDGKVKGRLADMTGQLSTRMGATLRHVGHLLDQHPSQKTLVLLLTDGEPDDNDVRDPQYLRFATNKTVEDINRKGIRTFCLLRDIYVE

>AFERRI_370026_UniProt_A0A060UMQ9
MKTISDVVMSDIAGLTGLFVTGTDTGVGKTWVAATLTRLMVQRGLLVRPRNPVESWRASGEVGLLPQNAIALWGLLAVPNQKILSMEENVDNILIK

>AFERRI_370027_UniProt_A0A060UT10
MPLVHMKDLLNHAYEHGYAVGAFDVVSLEFVEGVMAAAERSRAPVILSLAESHLEHYDFELLMSGVEAAARRSAVPVALHFDRGANLEAAVRAIRLGCNGVMVDASQSTFSDNLTHTKTVVEMAHACGVPVEGDLGYIPDAEDMDAQRRPATLPYTTVAEAKGFVERTGVDFLVVSIQAEQICPNGKAKLDIQRLRSINQALGIPLAIHCRTRLDDDQFRRLIVHGVAKINYFTALAEAANAAIRARAKSSPGAGYLDLVQDVGAAISAEAERCMRVWGAAGRAAEVLACCRPWAFVEHLIIHNVMGISEKEVTAMMIEGQQTLSTIPGVRSVITGKAMRERAQYRYCWRVRFAAPEVINSYHEHPDYVAFTNRRFRPVADREISIDYAMEGL

>AFERRI_370028_UniProt_A0A060UTN6
MAVELEKYQDILAELGEHASEVLRASWDEAARVFTPRGLENGYLKGAASLKSLGRGTDLVVSFIQSAPAVARELGEDAVHDMLAAGIKMYSKTSATVIAAMFSSSPVAATRLGDPELFRAYLHLLDMLLAQAPRGVRPMLDHLGILLGQLTLGGLRRWALWGAQAHKTDFDGQAKYFALESPESMGILQKERKGTLFIDVQRRIGMYLRALWGRDFFMRPTSGDFERREGYRPSIEGYIIHLPDAYDDLVWLAPSGEETRISGIALYRASAAHAACHQVYTTHQFDSAGLSAMQMTLVGLVEDARVEAIALKRFPGLGQIWLPLHTATPASGNDAAPLMARLAHALLDPEYFDDHPWVAMGRQMFSEQQNRLRSPEWAREVGLHLAAEIQQLGVVYSGTADLPDIPYRDDNRYMWEFEDVREVGQVIAGVTTQQIRKYVSVMEMVNAIDVPGAGDDANEIWVLSSEFFRDEEPTSLNQQEGREPPPEPYHYPEWDYQMQLERPGWCTVLEKRAKSGALEIIDEIVAKHKPVIGRLKYLIEALQPQGVQRLRKQEDGDEIDLNAAVRAMIEMRMGEQPDLRIMMRNVRKVRDLSVLLLIDLSESTNDPVLGSESTVLQLAREATVLLADALNKIGDPFAIHGFDSNGRHDVEYFRYKDFGAAYNDRAKSRLAGMSGQLSTRMGAAIRHAGSILKRQPSNKKLLLVITDGEPADNDVRDPQYLRYDAKKAVEELTQIGISPYCLSLDPRADQYVSRIFGANNYVVLDQVQRLPEKLPMLYMGLTR

>AFERRI_370029_UniProt_A0A060UNA2
MSPEIDPYLVQDMPYYRAVADEVELYEAAYSVRMPMMLKGPTGCGKTRFVEYMAWKLGKPLITVACNEDMTASDLVGRFLLDASGTRWQDGPLAIAARFGAICYLDEVVEARQDTTVVIHPLTDARRVLPLEKKGELVQAHPDFQMVISYNPGYQSLMKDLKQSTKQRFGALDFSYPAHAIETEIVAHETRVGVEIAGKLVSIAERARNLKGHGLDEGISTRMLIYAGSLITRGVEPLAACRMTLVRPITDDPDMRDALDAAVSTFF

>AFERRI_370030_UniProt_A0A060UNS5
MADSIIAVMNQKGGTGKTTLALNLAAGLARRAATHLVDADPQGSISQWVAMAATHTGLPPVAQPGADPFATIAQLACTHRYVVVDCPPAIQGDLVAAVMRSVQVILIPVLPSPIDLWASVGMAAALGEARHLNPDLRAGLVLNQLESRNALSRAMREALAEFDIPILQAGMQRRAAYRSAAVEGTSVYGLGKRAQAAVADMEAIIEEVLCL

>AFERRI_370031_UniProt_A0A060UMR5
MNAGTNPSAAPSGPQERLPTLNWRFEFGSYAKTRHFLDQMADLSKREDYYPNVSFGKTYVNISIDAEGQVVLAERKSSFMGEMEALVTADRA

>AFERRI_370032_UniProt_A0A060UT16
MPVTAGWMAWSASRSASADPAMANDPRMTGYLTRALSVEMAAVQQYLTQSSLTAMWQLKEYSSRFRRDAEEELGHAQRLIERMLVLGIPSNGTQLPPIRPGRSLEEMLLIDRELEIEVIRLYEEAANYCARVRAAETQTLFADLLQEELGHLRDLDGMLTGMHQGETS

>AFERRI_370033_UniProt_A0A060UTP2
MANVSGVALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPKAPDAGDSGLDGVVSQSLS

>AFERRI_370034_UniProt_A0A060UNA7
MANVSGVALGMIETRGLVPAIEAADAMTKAAEVRLVGRQFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHIIARVHSEVENILPSNPTE

>AFERRI_370035_UniProt_A0A060UNT0
MDIMRVVSDLVATRRIPGLQNASLRVLTDAKGRLSVAADPVGVPPGKWVIAVSGSAARYAAGDYRILTDLTIAGIIDHWDPSAGQTGN

>AFERRI_370036_UniProt_A0A060UMS0
MKICQVEKTLVSTNRIKEMGHRPLLVVKEKGGSRSIAVDAVGCVTGDWVICVGSSAAREAAGSKDFPSDLTIVGIIDHWSED

>AFERRI_370037_UniProt_A0A060UT22
MNTRNRPGRHLSPQPGANRPPYGLGTPASALQARPPSRAFASHELLHSPMHAANPACAMDQGRPCRHPLSNESENRRLLAHEQAIKGHFAAIIPALKRLAAQQHEADFPERAQRLADADLGFTLPVGILEDAWIAKLDMRALYGACVMHTIRLMAEQTQVAPPLQNSDEMSSFLLDCGYHAVDITPCSDGRLKGLIRYILRLPDDAVRSRKAYAGAMFDVEANVKRWIETELMRYREGRPVPADAGTRYLKIVVYHWSSSDPAHEGCAAHHSNERDAAEAGLGRLREFRQAIENSFCCGASVDTLLIGVDTDTDGIKVHVPDADGEMSLYRWVSNLTLYKETLNEDASTARLKVYQAIQAASATDGWGKGNGEPHEGMRRLIATLLINNLSQIEYVCGNWEGRYPDIGHNERFISVGDGFEEFQVRNLAYFVYLHTVEEGGPDLDVGIQIFSRINVLHGLPVPVAIHFRYDRRVPGSRERTVEHCQRVKAAIESRYAELHRQGLLVCGMTVQDKASGSPIEALEANGAAALRSAR

>AFERRI_370038_UniProt_A0A060UTP7
MSDSMANNMASPRSARAAALERRRALSHNGAAALGAKSSAPARTAGNTAGMAAPGATGKSLSRARREALSQGGGAIESPQSQSAVRTGIRVLASDLPTTTTPAETVAAAPGAASSDSCGCQGKAATEIAEREQLLEAVCTLVDEDPASVAGSSTSAVRKLCQERRRALSRQGKMAEGPARIPVSRTSLSGRDAAQMRRDALCQQGRGDQPACRPSGRIRQKPAAPAKVEQGTTLSGTPVTGTQVERSTRVTGTEPGSCRAITGTEYIGIEQYGTLCAAIPEPAPAKVGVGRTARGQSVSGAEIGRSVKVTGDEHGSCKAVTGTEYLSADKFESFCATRPALTPAKVGVAATEAGQRVSGTEVGRSARVTGDEPGSCRKLTGSQYYQPESFGSLCRDGGSAPHKVSVMSTLREQALTGTETAPGERVTGAERGVCASVTGTESAGLAQYQACNRKPVSVAEKVSVMRTWHEQSVSGTSVERSPKVTGDEYGGCQPVTGTEYAGPDQYVAFCAADHQTTARALMASRSGVASAMMTGIRLGPDSKVTGSARGEGLVLSGTPYGGEDQRALPNGDGTRMHPLTRGPVDALRMAVAAPEVAAVRGNFSVTTPARSAQGGALSRVTGTAYGAVGRITGPVNLAAGLVSGTPEFRYRDEAYSAAPVAAPVAAPVAAPVAAALEAPRSRLTGDGREGGFAITGAAWRRNESITGTEGTSTRRNPTLRGDQRGTLVGAAQLKDRERPELPISRVTGSSGNDAKGSSITYSGGARG

>AFERRI_370039_UniProt_A0A060UNB4
MADIQDYNSTPKYETFSYLPAMGPEKMRRQIAYLISQGWNPGIEHVEPERASTYYWYMWKLPMFGEQSVDTVIAELEACHRAHPGHHVRLIGYDNYSQSQGSSFVVFRGR

>AFERRI_370040_UniProt_A0A060UNT7
MAVKKYEAGVKDYRQTYWAPEYMPLDSDILACFKITPQPGVDREEAAAAVAAESSTGTWTTVWTDLLTDMDYYKGRAYRIEDVPGDDTCFYAFVAYPIDLFEEGSVVNVFTSLVGNVFGFKAVRALRLEDVRFPLAYVKTCNGPPHGIQVERDKMNKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVADAIRTAEAETGERKGHYLNVTAPSPEEMYERAEFAKELNMPIIMHDFLTGGFCANTGLARWCRKNGILLHIHRAMHAVVDRNPHHGIHFRVLAKALRLSGGDHLHTGTVVGKLEGDRGATQGWVDLLRESFVPEDRSRGIFFDQDWGSMPGVFAVASGGIHVWHMPALLAIFGDDAIFQFGGGTLGHPWGNAAGAAANRVALEACVEARNEGRDLEREGKDILTNAAKDSPELKIALETWKEIKFEFDTVDKLDVVNR

>AFERRI_370041_UniProt_A0A060UMS6
MICKFIKVKYIYYYDLLWFTVCMSIRHATLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFDQIGKKIYLTAAGEALTSACHDVLDRLEYFTQEIAALQGLEKGSLKVATLSTTKYFIPRMLGGFCTEHPGVASALFIGNRETLLERLARNQDDLYILGQPPEHMHVFAESFADNPVVVVVRPDHPLMPEKDIEPSRLQDAPFILREPGSGTRLAAEKFFEQHGVVLRTRMEFGSNEAVKQSVAGGLGIAVLSASTIRAELASGELAILDVRGFPLERKWYAVYPAGKQLSPIVKAFMEYLFAAPAHGENGPSLPKG

>AFERRI_370042_UniProt_A0A060UT29
MVFFVEFLKTNGLLDGGGDCQLLYHSPNDPKKREEPGALCLPILGTTMLDTLYP

>AFERRI_370043_UniProt_A0A060UTQ2
MTLGLHLSQGFTAGVKNKYSLGFGIEDAVILLPYSQQNELPKTHSRSLVTRTLLLMSLSHTSLFCLLTIHCG

>AFERRI_370044_UniProt_A0A060UNC1
MEYRQLGRTGIKVSTLCLGTMTFGSAFYNIATVGQKEADEIVRHAWESGINFFDSADVYSRGESEEILGNALKNNGIDRDSAVIATKVRGTMSDVDPNGSGLSRKHIMTACHASLRRLGTDHIDLYQVHGWDCRTPMDETLRALDDLVRSGKVLYVGCSNWPARHIARAQALADIGQWTGFSSLQAYYSLVGRDLEHELLPLCRELGLGVLPWSPLSGGFLTGKYRRDTSAPADSRRKDFDFPPIDQVHGYDAVEAAESIAQKIGATIPQVAIAWLLAQPGTSSVIIGAKRMEQLKDNLGAVQVRLSEEDVAILSAITAPAPLYPQWMVSRQNSDV

>AFERRI_370045_UniProt_A0A060UNU5
MRKRFSILMERSIRELRGEPCIAMLDIPPPQQEIQSSRSFGRPVTSAEELGEAISLYTVKAAYKLRRQGKSTEVIANFW

>AFERRI_370046_UniProt_A0A060UMT4
MGLPVGVGIAATKTLANHIAKKMPEYAGVCVWGDLPEGDQQRLLQQLPVSEIWGAPVDYTVAGDGNSDGLGSPVDGSRADAQALQYPHGTEHTGTARGTLHRHAGHPAAPAGDSILAILRPPGNQRRGIGRSDQSVYRKGRL

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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