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BMC type: BUF1B


Organism: Marininema mesophilum. Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

             SAMN05444487_101287 (fasta)
                       SAMN05444487_101288 (fasta)
                               SAMN05444487_101289 (fasta) HMM00266amintr_1_buf3 BUF3 (HMM details)
                                   SAMN05444487_101290 (fasta)
                                             SAMN05444487_101291 (fasta) HMM00860tp_1_bufgrm BUF1 (HMM details)
                                                       SAMN05444487_101292 (fasta) HMM13382deam_1_buf1 BUF1 (HMM details)
                                                               SAMN05444487_101293 (fasta)
                                                                   SAMN05444487_101294 (fasta)
                                                                        SAMN05444487_101295 (fasta) HMM04199cycl_1 BUF1B (HMM details)
                                                                                     SAMN05444487_101296 (fasta) HMM13382deam_1_buf1 BUF1B (HMM details)
                                                                                       SAMN05444487_101297 (fasta) P_moss BUF1B (HMM details)
                                                                                            SAMN05444487_101298 (fasta) HMM02441_04 BUF1B (HMM details)
                                                                                              SAMN05444487_101299 (fasta) H_fuchsia BUF1B (HMM details)
                                                                                                 SAMN05444487_101300 (fasta) H_banana BUF1B (HMM details)
                                                                                                        SAMN05444487_101301 (fasta)
                                                                                                         SAMN05444487_101302 (fasta) H_seafoam BUF1B (HMM details)
                                                                                                                   SAMN05444487_101303 (fasta) HMM01977ubiD_1_buf1 BUF1B (HMM details)
                                                                                                                       SAMN05444487_101304 (fasta) HMM02441_02 BUF1B (HMM details)
                                                                                                                           SAMN05444487_101305 (fasta) HMM00857isoch_1_buf1 BUF1B (HMM details)
                                                                                                                                     SAMN05444487_101306 (fasta) HMM13382deam_1_buf1 BUF1B (HMM details)
                                                                                                                                               SAMN05444487_101307 (fasta) HMM00860tp_2_buf1 BUF1B (HMM details)
                                                                                                                                                  SAMN05444487_101308 (fasta)
                                                                                                                                                         SAMN05444487_101309 (fasta)
                                                                                                                                                          SAMN05444487_101311 (fasta)
                                                                                                                                                           SAMN05444487_101312 (fasta)
                                                                                                                                                                SAMN05444487_101313 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_fuchsia
       H_seafoam
       H_banana

BMC-P(map on tree)

       P_moss

(complete list of loci)

Protein sequences:

>SAMN05444487_101287_UniProt_A0A1H2QTI0
MRSWKEETLALTEKLIHHPSVNGTVGERDIAYHLIDFFRELPYFQENPNQLYLWKTEGDDRERYNVAALVKSPEPKEETVILMGHMDTVGVEDYGKWKRLAFSPEELLKQWKKTTLTGQVKEDLATGKWLVGRGSVDMKSGVAVNMALLRHFAEHPEELDGNLLFLATCDEEDNSHGILSAVRELNHLATESDLRYVGAINTDYTSPQYKGDPSRYVYLGTVGKLLPAFFIVGEETHAGQAFEGFDPNLIAADLTYLIDYNPDFCDEMYGEVTMPPVSLKQTDLKQKYDVQTPFAAFSYYNFFVHSRSPKDVLQELKETASQALHNAIQMHQERYQRFCALSGSPYLPYPWTSEVMTYDELYEACVEKYGGEFKESMRFFGMNLLNDEALDLRQYCCRMVEEVWDWWGEKGPSIILFFASVYMPRVVLSEKEEQDQRLIQAVHKAVKDVQPQCSHPIQIRNFFPYISDMSFVAICDDEDGIEALTRNMPAWGLKHQMDVDAIRQLDVPVVNIGPYGIDAHKQWERVEIPYSMQVVPELIYQVVRGLLASWDDQ

>SAMN05444487_101288_UniProt_A0A1H2QRM0
MNDLILVRYGELALKGKNRKDFENRLLQNMRNKLDGFSGVKVKKTFGRVFVEPGDNPVEPIIQGLTEVFGIVGISLARCVESDLESIKKAAVQLVRDQDPIPRTFKVVARRAQKNFPHRSSEINRIIGGEVLRNVEGIRVDVHQPDLELRIEVRGEETYLYGQDIPGVGGLPVGSSGRVMLLLSGGIDSPVAAYLALKRGATLEAIHFHSYPFTSERAKQKVVDLAQELTRYAGNVSLHVVPFTEIQTQIRSKCKDSYMITIMRRMMVRIAEETAKRQKALALVTGESLGQVASQTLESMHVINHVAQVPVLRPLIGMDKQDIMTISKEIGTYETSILPYEDCCTVFQPKSPVTRPRLDVCEEMEKGLDVEALVGEAVDGIETIRLTPKQQEEGEFSSYF

>SAMN05444487_101289_UniProt_A0A1H2QRQ9
MIDMDNSATTRPDPEVVRVVTDVMKNVYGNPASLHGLGGKAERLVKQAREVIAKELGVSPASMIFTSGGTESNNMAIKGAAMQFRNRGRHLITTQVEHPSVFEVFKQLEAEGFRVTYLPVDQQGSVRLEDVEAALCEDTILVSIMHVNNEVGTIQPISEVGQLLRNYPKVLFHVDAVQSFGKMDVRPEEWGVDLLSISAHKLHGPRGVGCLYSREGVRLTPLLIGGGQESNQRSGTLNVPGIAGFAKATVLAANQRRGKWSQLQEWRRELIRRCTESLTHFRINGDPSDGGAPFILSLSFPGLKSEVIVHALEEEEIIVSSKSACSSKGEKASRILTAMGIDEATAVGTIRISMSRMTSVKDVEATASALQQIIPKLQKIMKVHEV

>SAMN05444487_101290_UniProt_A0A1H2QTC1
MPIIRTEVDIHAPIHLCYRSIESMIRRIYQKYCGKERKTESTSLVFLDYGKGVLFLDKKKICQRLGEMTDFIHTLKTVSTDQWMKPIGEGKWSPLEIVAHLHFWDRYLIEERLPEIEPDGAGSLEIEDINLKASLWTRSGVSCEEVIEQFLEFRGQLLRFLEGMPDADWDRMVRIGNHTISLAEYILEAIDHDEHHREQLRECFMKNVEGGTIP

>SAMN05444487_101291_UniProt_A0A1H2QSY5
MSTGKPIAQTHTDVYPDSHSAQPTGWLDRLFKLRSRGTNVRTELLAGLTTFMTMSYFIIVCPIILSEAGMPREAATAATIFSSVFCTLIFAFWANFPITMAPGMGLISFFTYTVVQGEGLSWQTALGAVFISGVVFLLLTITGLRQALFKAVPRTLRSSITVGIGLFVAFIGLKNAGIIVANKATFVSLGSITQPTTALAAGGVLLAAFLAARRVKGALLLSILALTVGAMALGITKTPQGVGDIFSLSLPDVSPTFMAMDIKGALAYGIIPIIFSFTIVELFDNMATLMGLSNRAGLMKKDGTIPNLNRALQADAVGTMGSAVMGATALNAYVENATGISEGGRTGLTALVTGVLFLLCLFFIPLVSLIPALATAPILVLVGAMMLQEVKEIPMDDLTETLPAFLTIVMTPLTFSIAEGLAFGFISYTVLKLLTGRRKDLHWSMYLIAAAFIVNFAYHG

>SAMN05444487_101292_UniProt_A0A1H2QSZ3
MRLLIRNAEIVTMNREEEVIFGDLLIEDGRIAEIAPQIEKKVDQTIDATGKTVIPGLIQTHIHLCQTLFRGQADDLELLDWLRKRVLPLEAAHDEESLYYSAMLGIGELISGGTTSVVDMETVHHTDAAFRAIAESGIRALSGKVMMDHGEGVPPALMEDTATSIQKSVELLEKWHNYDDGRIRYAFCPRFVVSCSEELLIQVRDLAEKYDVMIHTHASENKGEINLVEQERGMRNVLYLDKIGIASPRLILAHCVWLDDEERRVIRERGVKVSHCPGSNLKLASGYAEIPELLACDAKLSLGADGAACNNNLDMFQEMRMAALIQKPLHGPTSMPAREVFRMATIGGAEAMGLADEIGSLEVGKKADLAILDLNHFHNSPREGVDLISRLVYSAKSSDVETTIINGKIVMEKGVMKTMDKQKVLQESNRSIRRLLDRTAKEGVGTHS

>SAMN05444487_101293_UniProt_A0A1H2QSF5
MNKLIPEDAITFLQDLIQTDSVNPPGNEARVAEKIASRLAHRVSVERVSLTEGRENLLVRLGKGERTLLFCGHMDTVSLGDPEGWSVPPLAGKIMDNRIYGRGASDMKSGLAAMVLALESLVLEGVEPGGEILLLATAGEEVDSCGARNYYEQGGMEEVDGMVIGEPTGEKVAVGHKGALWLEVTTQGRTAHGSMPGKGINAVSHLLHMAGLLEEMELGWRYEDEILGGESVALTQIQGGIQTNVIPDRARFTADIRTVPPREHGTLVREVEERLHEGRRKYPDLSFQVRILLDRPAILTPPKDPLIRLALELKGDPERKVVGVPYYTDGSVLNADSLVPTLIYGPGEEALAHQPDEWVDIDAYLRSITFYRELALRFFRIC

>SAMN05444487_101294_UniProt_A0A1H2QTZ5
METPVIKKEVMIPPYEGRAIEVKKGESLCIIDVEGKQVGDFLCFNQREPTEYVSPVHMRSSLSSVRLCEGDGLYSNQRRPLMRLVKDTVSRHDFFFPACDDYRYRVDFGVENHPNCHDNLTQAIAGFGIRPMLLPDPINWFMNNELDDEWDYEIKEPLSRPGDYVKLKALMDVVVAVSTCSQDMAPVNGWKVTPLKLQLLAKERDFYE

>SAMN05444487_101295_UniProt_A0A1H2QSM1
MGFRLIDLSQEIYQGMPVFPPHQKTMIFPNMTHEESEKTMGFPFATNNLLINEHGPTHSDATYEYDPKGQTIDEMPLNYFYGPALCLDVSNVSPDEYIHPVDLEESLSRSGQRINRGDILLLYTGHYERSYGTEEWLTRYTGLHLTAAEWLAERGIVNIGIDAPAIDKPDDPQFSGHRICRKYSITNTENLCNLEQVAGKRFVYFGLPLKIRKGTGSPVRAVAVFVE

>SAMN05444487_101296_UniProt_A0A1H2QUW7
MDTHRIKEAVHWRRLIDTLLDSAQYADLVLQGGYVINVITREIYEADVAIKGEKILLLGDASELMGPSTHVENVAGKFIAPGFIDSHMHFESAMLTVTEFSRLSIPTGTTTLVADPHEIGNVLGVMGMKAMIEEAKTLPHQVRFTVPCRTPDAPGLETAGMDVSSKDMAELLTDSWVQGIGEIQGFSNVHPVYKYASHILDDQIASVAYTHSLGKTVEGNAPALFGKELAAHIISGGTHISCHETTTKEEMVEKLRYGVTVFMREGSSQRNMAECIRAITEEGMDSRRAVLVSDDMVPEDLLNDGHMNDIVRRTIACGVDPVEAIQMVTINPATHFGFRDVGVLAPGKRADIAVLSDLEQMTVDSVYLNGRKAAEKGNLTIELPAYTYPETVKGSVKREKVKASDLHISAVDRSKARVRAIEVIPDQNLTGAQEFELNVQEGVIQPCLQRDVLPLLVLERHGRGGGIGKTFVTGMTLQRGAIAESVAHDTHNLIVTGTNYEDMAMAVNRVIAMGGGIAMIADGKVVGDLPLPVGGLMTDLLSGKELADTVSNLHRLAKEELGCQLHVPFMHLSFLSLVTSPKWKITDIGLIEVDEFKVLPTVIQEGR

>SAMN05444487_101297_UniProt_A0A1H2QTT7
MQLGRVIGIAVATRKDEKLVGSKLLITQPISPEGEFMGAPLITVDTVGAGVGEQVIYVTGSVAARAIPQDHAPVDAAIVGIIDSIQCQVRKE

>SAMN05444487_101298_UniProt_A0A1H2QTY3
MTRTWGYSGEVEQALLHILCHNQERLPSSAGSVVILLTPAGAAMAETPSLYGFLAQKGIVPEVWVQGEVSATLPWPIRQVDGHVETWLNEMKRRTQLLLLPTPSLSFLARLIELDDADPFCALVLHSLLKGKRVGIPKETVDLKPPHSAGFGGAGRGGGVLLQRNYRQRMADAAALGIDFLENKELVSWLETKGRGQRELVTEEQVRFFAEKENGHMIVVSKGAMITPLALDTAKELGIRIETR

>SAMN05444487_101299_UniProt_A0A1H2QVB4
MGEALGLIETKGLVGAVEAADAMVKAANVEICGYEKIGFGLVTVMVRGDVGAVKAATDAGASAASRVGELISVHVIPRPHQEVERALLSKGKE

>SAMN05444487_101300_UniProt_A0A1H2QTD8
MAQQALGMIEAIGYTTAVSAADAALKAANVTLSSWERVIGAGGALGVTIHLSGDVAAVTSAVQAGREEAERVGQVISSHVIPRAHNEVNSKILPLFEAASRVPQKEIVAKDQSKAKLSTKGDKGKRGKGRPSPSQGDQGVSEQDSDGNEG

>SAMN05444487_101301_UniProt_A0A1H2QTH8
MAEQFMKQMVEEILAKDRGHSRTKKTAKELTIPSQVPHGSQSSTSPVPSAPANIRRPNYQQEQRQKRLSPLYQGDSTSVTPRNVETRKSNTSGVAKDERVSLQRLSLFQTHGSSHATPTKAPERIGRLGNGSEIWFFPSVHPKLSKELQVAGITCSAVGIITCPSPFIGPLFSAEVLLEDQPEIEREIQRGKEGIQLRLGAENPDRLRTLLRELFLRLNRVGLKRASIHFAKQPTSLVEKVLPQRGRGAAALLEGVSDGECWSILQRVLVAFPEADVHFHVEQGALLLRGDAKEVEAMVKVVKREVDQSM

>SAMN05444487_101302_UniProt_A0A1H2QV60
MPSIGLVETRSLVAALEALDTMCKAANVRMVDIKRVGSGLVTVIVDGDVAAVQAAVAAGKEAHTITGGELIAANVIPHPHSDLNRML

>SAMN05444487_101303_UniProt_A0A1H2QTU3
MIKNIRQLINYWTETDTLRRVVKPVDPEFELGAVVKQFQGRTPLLFEQITGYSVPMIVGIGGDRKRIAESMGIAPTDMLPHLIRGITNPIATRRVEKAPVQENVILEPGDLDADFPVCRYHEEDCGDYYVSGLLVVKGPDGKKRYTSIRRMKFLGGNRTNIVITSPGLQEQYRQLEAQGESMEIAVMFGVIPAAVLASQVSTHLYDTDKLDVAGALVGEGLDVVACRTVDLEVLAEAEVVFEGRVLPNVREYEGVFAELGGYYGGEGDQPIVEISAITHRNEPIWQTILPASCEEKLPMALTREATLLATVRQVVPGIQDVHITMPGAGRFHAIIQIEKHKEGDAKQALLAAFAGDKDLKHVVVVNKDVNIWDLEDVEWAIATRFQADQDLMIVPGANGSPLEPSHELRGVSAKMGLDATYPLGKENMFRRARIPGAESIDLRNYLE

>SAMN05444487_101304_UniProt_A0A1H2QU34
MRIVVGITGASGSIYGYSLVRTLSELGVDTYVVATKMGAQVMQFECGVKIEELKKYATLLDNQNLFASVASGSFLTDGMVIVPCSMNTLGGIANGVGDTLLSRTASVVLKEQRKLIIVTRETPLHLIHLENMTQLTRAGAMIMPAAPGFYHRPTEIWELVNFMVARILDSFGIEHELLARWGEKEGSR

>SAMN05444487_101305_UniProt_A0A1H2QU42
MKGNKHALVIIDMLNDFIGPQAALRCENGEKIVPNIKETVNFAHAQGIQVVFVQETHRKNDADFRVRPVHAIKGTWGSQFIEELQPDESQGDYIVQKRRHSAFSYTDFDLFLREEAIDTVVLTGVWTNVCVRSTASDALYHGYNIICLSDSTASQDDDMHRSGLRDIGLFGEVMTTEDYITRAKEKFPVESAI

>SAMN05444487_101306_UniProt_A0A1H2QVP9
MDLLLKNANIPQGDRQVQTNILVDGGSIVGYVQDASGVIAERTIDLDGKLVVPGCIDPHTHFMDPGFTHRETFAEASMSAAAGGLTSHVDMPCCSKPSVRSEDELYMKLNPIKDQAYIDFAFWGGMTGEDVREGKLDNVWGQVDAGVTAFKVYMTPSVPTFPRVGDAEMLEIFRKVAETGLPVGVHAENYDICSFYANKLEKEGRTDSPAWAEARMALAEKAAIQLIISFAEETGARAHIVHMSTKEGAVLIREAKRRGVKITAEACPHYLTLNAEEHMTKFGALAKIAPPLRGKEDNEVHWQALADGTIDFVGTDHAPYEIATEKIAEGLHIWNSFPGIPGVETMVPIMVSEGLNKGRLSLSRFVEVTSRNAAIHFGLYPKKGTMELGSDADFTVIDLEREYEIDQEKTLTKAKYTPFHGMKLKGKPVMTIVRGGVVYDEDRGGIVGTAGYGQFVKRQSNIELKRVEGSLVY

>SAMN05444487_101307_UniProt_A0A1H2QVU6
MRAATYLKTGFLGLQHVLAMYAGAVIVPLILGSALKMSGEELSFLIALDLFTSGIATLIQVIGGKHLGIRLPVILGCTFTAVPPMIAIGKVEGLPGIFGAVIISGLAVMLLATFFSKVLKWFPPVVTGSVIMIIGLSLIPVAMKNAAGGEGSPDFGQIENLLLAMITVVSVVAINRWSRGYIRAISVLLAVMIGTVVAFFMGKVDFGQVTEAGWFRLVEPLHFGMPTFQLPAILTMILVGIVSMIESTGVFLALGEVCERKLEPKDIRRGLRAEGLASVIGGLFSSFPYTSYSQNVGLVALSKVRKRRVAVAAGLILMALAFLPKVAAITMVVPTAVLGGAMLPMFGMVIASGVRMLHRVDFRRNENLLIVACSVGIGLGAAVVPGVFKEVPHSLKLFVENGIVVGSLTAFLLNLLFTYGADHKKDKDHSSSSVAHNQQVEVTL

>SAMN05444487_101308_UniProt_A0A1H2QUI3
MSEEVADIQLSVRKSNTHTLKSSLSLPPTGVLKKELAQLNNQVSQEMYGIGVKKQKVEIMGDKIVIFTEQKRIPALAILDGKYGELTLSVDAALVREFKERLKNHVEMQFGLKVRSILKDYDPGTEAACIVILLDRNLV

>SAMN05444487_101309_UniProt_A0A1H2QUQ6
MYPKKRIFKVFAVVFAFLLIASGGMNSKAFAAETKLLEFDPAATDAFCKLVTGSCSPSIDWEQSTLTATDVKATPIGTPEETDQNTLFMGSAELENESATVTQSLKSQEFKKDFTDSVTTTVTEGWKAGGSLSLNATIKEIFGLSGTATGEYNYSESEAKTKTSTATYTSPAQSINVPPRAKAIVTVNLQRVNSTGKVSLDALIGGDLAIDNSEEDNPSMNPVYDLFKNATSKGYQLPPQLSLDDSAQKLRFKGSGEWTADYGSKYKVNVQLVDLDTGEPKFFKNKDGKNVKSYSFEVPVKKGDVDNKGSDKK

>SAMN05444487_101311_UniProt_A0A1H2QUS4
MIEGTVKWFNAEKGFGFIEVEGRDDVFVHFSAIQAEGFKTLDEGDKVSFEITQGNRGDQAQNVVKI

>SAMN05444487_101312_UniProt_A0A1H2QWF9
MANRSNRLLVPGSEGAINQMKTEIASEFGVQLGPDQPARANGSVGGEITRRLVGMSMQNRI

>SAMN05444487_101313_UniProt_A0A1H2QV09
MEDKEWKEWVHWVAEEYGLDLSKERVTEKQRRILEAAIHIFAEKGFEGASTSSIAKEAGVAEATIFKHYKTKKGLLLYLVIPALSRVVVPYILKPVVKILEKEQSLSEIIPELYADRLQLVENNWRKIQIILVESLYQPEIREAVQNHVATKIFGEVVERVEEWQKEGRIRNDLPAHVVARSIISMGFGFIVTKNILPGKAVQQGQSEELSWTAEALLHGIAGSLEQKNN

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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