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BMC type: BUF1B


Organism: Bacillus firmus DS1. Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

      PBF_20548 (fasta)
                PBF_20553 (fasta)
                                PBF_20558 (fasta)
                                             PBF_20563 (fasta)
                                               PBF_20568 (fasta)
                                                       PBF_20573 (fasta) HMM13382deam_1_buf1 BUF1B (HMM details)
                                                              PBF_20578 (fasta)
                                                                  PBF_20583 (fasta)
                                                                      PBF_20588 (fasta) HMM04199cycl_1 BUF1B (HMM details)
                                                                                  PBF_20593 (fasta) HMM13382deam_1_buf1 BUF1B (HMM details)
                                                                                   PBF_20598 (fasta) P_moss BUF1B (HMM details)
                                                                                       PBF_20603 (fasta) HMM02441_04 BUF1B (HMM details)
                                                                                        PBF_20608 (fasta) H_fuchsia BUF1B (HMM details)
                                                                                          PBF_20613 (fasta) H_banana BUF1B (HMM details)
                                                                                                PBF_20618 (fasta)
                                                                                                 PBF_20623 (fasta) H_seafoam BUF1B (HMM details)
                                                                                                         PBF_20628 (fasta) HMM01977ubiD_1_buf1 BUF1B (HMM details)
                                                                                                            PBF_20633 (fasta) HMM02441_02 BUF1B (HMM details)
                                                                                                               PBF_20638 (fasta) HMM00857isoch_1_buf1 BUF1B (HMM details)
                                                                                                                        PBF_20643 (fasta) HMM13382deam_1_buf1 BUF1B (HMM details)
                                                                                                                                PBF_20648 (fasta) HMM00860tp_2_buf1 BUF1B (HMM details)
                                                                                                                                  PBF_20653 (fasta)
                                                                                                                                     PBF_20658 (fasta)
                                                                                                                                        PBF_20663 (fasta)
                                                                                                                                             PBF_20668 (fasta)
                                                                                                                                                            PBF_20673 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_fuchsia
       H_seafoam
       H_banana

BMC-P(map on tree)

       P_moss

(complete list of loci)

Protein sequences:

>PBF_20548_UniProt_W7KNT6
MKKELLFAFAAFFFMSLSAITGVYAGEQEQKTVSLSKKKVDVTGDNKADTVYIKGVYYEEGASFLKEISLEVKASDGNTYKAELEGGYEPQIQFEDLNHDSIKDMYIIIPTGGSGGLSNFYLYTLKDFKLIDLSVPDPLVINSQFENGYKANISIQDTKQSYTFDLRDRSKEYERLGMYVNGKLSEPTELMVNPYSTLKIIPVEGKEGLMGVQRISGAYNADTIAFVESFWLYEEGKWKLKDTKVMKMNSRKR

>PBF_20553_UniProt_W7L0S8
MNLFLEGLNSAVGFLNDIVWTYILIAVLIILGLYFSLRSKFVQFRYFGEMVRILGDKTMVSAEGKRGISSFQAFTISAASRIGTGNMAGVATAIAAGGPGAVFWMWVIAFLGAASSFVESTLAQIYKVKDKDGFRGGPAYYMEKGLNKRWMGILFAVIITFCFGLVFNSVQSNTISLAFNEAFGTSRLTIGLILAVLTAVIIFGGIKRIAYVSQVIVPIMAVIYLIVAIVIVIMNITEVPNLIATIVKGAFGMDQAFGGAMGAAVMMGIKRGLFSNEAGMGSAPNAAATAAVTHPVKQGLIQTLGVFVDTILICSATAFMIILSGAYTSPDLSGIQLTQTALSSHIGTWAPIFVAVSIFLFAFSSVIGNYYYGETNIEFIKESPLAIFIYRIGVIGMVIFGALVDLATVWGLADLFMGIMALINLIAITMLGKIAFAALKDYKAQRKEGKDPVFYADSIPGLKGIESWETKENALKKAAK

>PBF_20558_UniProt_W7L226
MSSAEKFRDLPLEDVLGDRFGRYSKYIIQDRALPDARDGLKPVQRRILYAMHVEGNTHEKGFRKSAKTVGNVIGNYHPHGDTSVYDAMVRMSQDWKVRNLLVEMHGNNGSIDGDPPAAMRYTEARLSPLSSELLRDIEKRTVEFIPNFDDTSNEPTVLPAVYPNLLVNGSTGISAGYATDIPPHHLNEIIDGVILRMDKPDCSIDDLMEHIKGPDFPTGGIIQGIDGIKKAYETGRGKIIVRGKAEFEDLRGGKKQIVITEIPYEVNKANLVKKIDEFRLDRKVEGIAEVRDETDRTGLRIVIELKKDADPEGVLHYLYKNSDLQIPYNFNMVAIHNRHPKLMGLRELLDAYIGHRKEVVTRRSQFELQKAEARQHIVEGLMKALSILDEVIAAIRASKDKRDAKDNLIAKFEFTEPQAEAIVSLQLYRLTNTDITALRAEAEELAKLIGELKAILESEKKLLSVIKKELRDVKKRFADERRTRIEAEIEEIKINLEVLVASEDVIVTVTKEGYVKRTSQRSFAASNGQDFGMKDSDRIIAQLDMNTTDVLLVFTNKGNYLYCPVHQLPDIRWKDLGQHIANIIPIDRNESIVRAIPVKDFETEEYLLFMTKNGMVKKTELKSYKAQRYSKPLVAVNVKGDDEVLDVYLTDGTKEIFLATHQGYGLWFHEEEVSIVGARAAGVKGINLKDGDFVTGAQLIEETKEQAVVIVTQRGSIKKMKLTEFERTSRAKRGVVMLRELKSNPHRIVGCVIVRSKDDIYIETEKGHIEAVNASAIRFNDRYSNGSFIIDDSESGKAKCMWKVEETKNVADVSAE

>PBF_20563_UniProt_W7KSF7
MARNQEAFDYNDDAIQVLEGLEAVRKRPGMYIGSTDARGLHHLVYEIVDNAVDEALAGYGDHIIVRIHKDNSISVQDKGRGMPTGMHRMGKPTPEVILTVLHAGGKFGQGGYKTSGGLHGVGASVVNALSEWLVVKIKRDGFVYEQRFELGGKPVTTLEKTGKTNQSGTTIHFKPDPSIFSTTTYNYETLCERLRESAFLLKGMKIEIIDERNDFHDVFHYENGIEAFVGYLNEEKDVLHPVVSFEGESNAIEVDFAFQFNDGYSENVLSFVNNVRTKDGGTHEAGSKTAMTRAFNEYARKVNLLKEKDKNLDGADLREGFTAIISVRVPEELLQFEGQTKGKLGTSEARSAVDSVVSEHLSYFLEENPETSSLLIKKAIKAFQAREAARKAREEARSGKKRKKSEAMLSGKLTPAQSRNPQRNELYLVEGDSAGGSAKQGRDRRFQAVLPLRGKVINTEKAKLADIFKNEEINTIIHAVGAGVGADFNLDDVNYDKVIIMTDADTDGAHIQVLLLTFFYRYMKPLLEAGKVFIALPPLYKVSRGSGKKEVIEYAWSDDDLQDTIKKVGKGYMLQRYKGLGEMNADQLWETTMDPESRTLIRVKIDDAARAERRVTTLMGDKVEPRRKWIESNVAFGLEEDGSILENENISVLEEEGVDS

>PBF_20568_UniProt_W7LB69
MVSEAMQKAGYEIIPVNPSVDEVLGVKAVPSLKDIEGHVDIVNVFRRSEFLPEIARESAEIDADIFWAQLGVANQEAYDFLKEKGYIVIMDRCIKVEHALTK

>PBF_20573_UniProt_W7KNT9
MSSILIKNAEIITMNAAEEIIFGDLYIVDDRIAEIGQNLSHKADKVIDATGKTIIPGFIQTHIHLCQTLFRGQADDLELLDWLKQKIWPLEASHDEESIYYSAMLGIGELLQSGTTTVVDMETVNHTEYAFQAIAKSGIRALAGKVMMDKGDEVPVPLRENTSKSIQQSVDLLERWHNRDNGRIQYAFCPRFVVSCTEELLTNVRDLSAQYNVRVHTHASENANEILLVERELGMRNVVYLDSIGLANERLILAHCVWLNEEEKRIIKERGVKVSHCPGSNLKLASGVAEIPSLLDQQAFVSLGADGAPCNNNLDMFNEMRLAALIQKPVHGPTAMNARTVFRMATIGGAKAVGMEQEIGSLEPGKKADLAILNLNDFHVYPSFDIDTISRIVYSATRADVESTIVNGKLVMENRKLNTVDKEVVLKEANSSIKRLLKRLETAVY

>PBF_20578_UniProt_W7L0T0
MNDIQFLQHLLQIDSSNPPGNEHLVTEAFINRCKEKGLPFKVTMLDETRSNFEVTLPGKSGKQLFLCGHMDTVSPGTGEWVHSPFSGEIANGRIYGRGASDMKSGLAAMFLALEELYLTHTDLPADVTFLATAGEEVDSCGARTFLKENDGRKIDALVIAEPTNEKIVIGHKGALWLEITAYGKTSHGSMPEQGINAVDHMLKIIRVLDEMKIEWKTEKKPLGQSSLAVTMIEGGLQTNVIPDKCSIRADIRTVPPQSHFHFIKKLKSKLDVLLDQGEIYKYSIETLLDRPSILTDPAQDIIQIAQMVKGESEADHYGVSYYTDGAVLNPRSEIPTLIYGPGDEKLAHQPNEWVSLAAYQRSIQFYRQLIMSYGKLEPSEVSPMRGGGRN

>PBF_20583_UniProt_W7L229
MKEVFNRGKIRDEIIIPPYEGRSALIHKGEDLIIIDMEGKQVGDFVCFNYEDPGEHVSPVHMRASLSSIRLKTGDWLYSNRRRPLMQLLEDTVGKHDFFFPACDYYRYKVDFDKEDHPNCHDNIANALKKYNIHPPVIPDPINIFMNNVLDDVGDYVIAEPLSKPGDYIRLKALCDVVIACTTCSQDMAPVNGFKVTPIKMQIMEADS

>PBF_20588_UniProt_W7KSF8
MGVKLVDLTQEIYQGMPVFPLHQKTMIFPNISHEESEKQIGFMFATNNLLINEHGPTHSDATYEYDPNGQYIDEMPLEYFYGPAVCLDVSHIQPHQYITDRDLEDALKKSQKFIEKGDIVLLYTGHYNRSYGTDKWLTTYTGLDYQAAKWLADKGAVNIGIDAPAIDHPDDPKYSGHLICREYGITNTENLCNLDQIAGMRFLYFGLPLRIRKGTGSPIRAVAVFIE

>PBF_20593_UniProt_W7LB70
MDAKNIKKAVQYRKLIDVLLDPSQYADVVLKGGYFINVITREIYEADVAMKGEYILMAGDAKDLIGPKTIVENIQGKFVCPGFIDSHMHFESAMLTCTEFSKLSIPTGTTTLIGDPHEIGNVLGVHGMQAMIEEAKTLPNRVLFTVPCAVPDAPGLETSGFDVTSKDMKELLADPYVQGIGEIQSFSNIGPVYEHAPELIDDLVAAVSYANSIGKTVEGNAPGLFGKELAAHIISGGNHVSCHETTTKEETVEKLRNGVSVFMREGSSQRNMADCIRAITEDGLDSRRAILVSDDMVPADLLNYGHMNDIVRRTIAVGIDPVEAIQMATINPATHFGFKDVGVIAPGKRADVVVISDLNNMTIDQVYLAGKKAAEKGELTIDIAPYIYPESVKKSVKRKPVTVKELAIEAPGSRAKVRAIEAIPFQNLTGGSEYTLNVKEGIVQPCLKQDVLPLLVVERHGRTGKIGKTFLHGFDLKSGAIAESVAHDTHNIIVTGTNYEDMAMAVNRVIAMDGGIAMIKDSKLVGDLPLRIGGLMTDELTGKEMSEKVDELSQLAKEVLGCGMEVPFMHLSFWSLVTSPKWKITDMGLIDVDKFEVIPTIIN

>PBF_20598_UniProt_W7KNU3
MQLGIVVGRVTATRKDDNLVGTKLLITQPIGLDGSMLPNPIITVDTVGAGIGEKVIYVTGSMASRAVQNKDAPIDAAIIGIIDSVEGMETGG

>PBF_20603_UniProt_W7L0T2
MISKKQSVMAKNTLQELYMRNEKSRGRKPHILALLTSHMIGMEPGFSYLQKLIQEDITLRMAAEEEMLTQFPLEELVFLTGNDDWISASLINDQLLDHFDDILLPILSFSLITDLLTLNEQRPLVRIILKALLKGKRVTALKAGGDPFSQYWKLKGMDKGPDLLKRKLNGQMAELKMLGIRLIDLNDGTDFTVQQMKKTVISDETVRFAYLSKLDQLTVPKGAIITPLARDTAKELKIDIILL

>PBF_20608_UniProt_W7L233
MGEALGLIETKGLVGAVEAADAMVKAANVEICGYEKVGFGLVTVMVRGDVGAVKAATDAGAEAASRVGELISVHVIPRPHSEVERALLSKNIGE

>PBF_20613_UniProt_W7KSF9
MQALGLIETVGYSTAVSAADAAVKAADVEIVGIEKVIGVDGYLGVTIHFNGDVAAVKSAVDAGVSSAERIGKVISAHVIPRAHSEVAGKLLPNFKLKDMHPEAGAEKEVKSVDKPHEKKQVKKQIEPDENDNDKPSV

>PBF_20618_UniProt_W7LB71
MSDFIKSVVEEVMKPYSKQKENPINGAPSFPPPRSQPGLKSGIPGINRPNYQKEKMNKRIAVNHADSSKAANPHPNVRRQTVSLSSPKPSAKEKIAQLQTLSLAQGKQRVSAETKPGRNARESQLVGQTPEGLKVWLFSDLHPTLEGSFQRELKTRSIGVVTSEKCSPGQLFLLNDLLREFPSLKYCLSWDKSSRQSFSLELYEENDGILLNALKSFFKKLSQKSFKPITAYTEKSPSPWLTKQLGLNSTVGGVAVIEGIDYYSGILLLDRNMKKSPAEHIHFLIEKKYVLLHGQFDEVSRITDKLCKEFDRIK

>PBF_20623_UniProt_W7KNU8
MKAIGLIETRGLTAAIEALDSMAKAANVSLVDLKRVGSGLVTVIIEGDVAAVTAAVEVGKTAHTLAGGELVSANVIPRPHSELRKIL

>PBF_20628_UniProt_W7L0T5
MNPVTMRALLDRWESRGLLHRVKKEVDPLYELGAVINTRNGRQPFLFEKIKGYQSAMAAGLGGDRELVADSMGISSSELIPKIIESIVNPIPTTLRQTGPVQENLVTGEFDLADLFPIPTYHAEDSGAYYVAGILVVNDLSGRKRYTSIRRMQYLGGNRTNILITSPELMEQYAHYESIGEPMEVAVMFGVVPAVVLSSQISTHLYHTDKLDVAGALLGQSLDVVQCKTVDLEVLADAEIVLEGKMLPYERELEGPFGELAGYYGTRTPQPIVEFSAVTYRNNAISQTIFPSSYEERLPMALVREATLFSTVRQVVPNIKAVHIPMGGVARYHAVIQIEKKHDGDGKQAALAAFASDKDLKHVIVVNDDVDIFDSDDVEWAIATRVQAGDDIFIVQGAKGSPLESSHHLKGISDKMGIDATYPLGKEELFRRTSIPIEVNLEDYL

>PBF_20633_UniProt_W7L235
MGITGASGSLYAYTLIRALHQLEIETHLIATEMGEKVMQFECGVKMDELKEYAAIHSNRNLFAAVASGSFKTDGMVIVPCSMNTLGAIANGVGDTLLSRAASVVLKENRKFIIVPREAPFNLIHLRNMTLLAESGACIMPASPGFYHKPTEIWELANFMVARILDMLDIDHELLERWGEKT

>PBF_20638_UniProt_W7KSG1
MELRGKKHCVVIIDMLNDFIGEKAALRCENGEKIVPKIQELIEFAHNHNIQVVHVQEAHRKNDRDFRVRPVHAVKGTWGSEFIPELQPDESKGDYVVQKRRHSAFSYTDFDLFLREEEIDTVVLTGVWTNVCVRSTASDALYHGYNVICVSDATASQDDDMHVSGLRDIDIFGDILSTEEYKELAKKKFSQDESVV

>PBF_20643_UniProt_W7LB72
MDLILKNANIPQGDRQVLTNILVNEGKIVGYTNDISFLNAAKVIDIQGKLVVPGCIDPHTHFMDPGFTHRETFATGSRSAAAGGLTTIIDMPCCSKPSVRDGDSFNKKIGPIRDQAYIDYCFWGGMTGEDAREGWIDNIYPQIDQGVVAFKVYMTPSVPTFPKVSDAEMLEIFKNVAKTGLPIGVHAENYDICTFNSKKLEKEGRLDGPAWAEARSSLAEKVAIELILSFAEATDARVHVVHMSTKEGVQLVKAAKKRGVKVTAETCPHYLVLNAQDSMSERGSYAKIAPPLRGKEDNESHWQALADGTIDFVGTDHAPYEIATEKDYPGATIWNTFPGIPGVETMVPILVSEGLNKGRISLSRFVEVTSRNAAIHYGIYPKKGSMEIGSDADFTVIDLEKEYVIDEQKTESMAKYNPLHGMKLKGKPVQTIIRGNVVFEEDKGIVGEAGYGEYVPRQSIQRLERTLKYEKYEAVNVKTKDPVAQQ

>PBF_20648_UniProt_W7KNV3
MEKLNPWKVGTLGFQHVLAMYAGAVIVPLIVGPAIGLNAQQLAYLISIDLFTCGIATLLQVIGGKHFGIRLPVILGCTFTAVGPMIAIGNLQGITAIYGAIIASGIIVMILSQFMSKIMRFFPPVVTGSVVAIIGVSLIPVAMNNAAGGLGSPDYGSAKNLFLAAFTLVLIILMNRFFKGYMKAISVLLSLVAGTIAAYFMGLVSFSEVSQASWFHVVQPFYFGFPTFNPSAILTMTLVAIVSMIESTGVFLALGDVCERKLDSKDIKKGLRAEGLAVVIGGIFNAFPYTSFSQNVGLVALTKVKTRNVVIAAGVILMTLGLLPKVAALTTIIPMAVLGGAMIPMFGMVISSGIRMLSAVDFSKNENLLIVACSIGIGLGSAVVPQIFESLPTSARLLVENGIVLGSITAILLNLVFNYKDLNISESERIEQLKGDHSAEMI

>PBF_20653_UniProt_W7L0T8
MTVSTSKLSQTIKKDLAYLYNRVNQEIYGTGVKKQRIETFDDRVIIFAQHKRVQALHMLSQNFHHLTISVDSALIVEFKSLFKGMIEDALHLKVRTILKDYDPVTEEACTIIYFEE

>PBF_20658_UniProt_W7L237
MKSIQFIVNGKECTVLCPPAKTLLDVLREDLGLTASKECCGKGECGSCSVLIDNEVVCSCLVLAGQAENQVITTCEGVGLSPNLDVIQESFIAEGATQCGYCTPGIIVSAKAFLDGIDHVPSVGEIKTALGGNLCRCTGYTKIIKAVQTAASQKISEPETIR

>PBF_20663_UniProt_W7KSG4
MTHTAILLAAGQSSRMGTLKGLLPWNGMTLFEHQLNSLRKSVFTDIVVVLGFEAEKFLSIGKKHSAKLIINEHFQDGKCSSIIAGVKAVNTLSETILITSVDQPLHPVIINKLAGNLRNSRCLIAVPSHQGKRGHPILFSSRLRNELLSIKEEKMGLRHVIHEHEKFLLELPVENEQIHLNLNHQEDYKIALKKYTGR

>PBF_20668_UniProt_W7LB73
MLVSEIDMITPSSLSECLMQLSKEGRIHRLIAGGTDAAVRMKEGKWRPEIWINIKNLNELRYIQESEDCIYIGPLTTHKDIIYSPLLQRKADVLVDAAREVGATQMQNMGTIGGNIGTASPAGDTLPALYVLGARLELTSLSTKRIIPIEEFILGPGRTVLKENEMITKILIKSQKPNEIGIFQKLGPRKAQSISIVNVAISLTLDQDLKCREGKIAFGSVAPTIIRARKCESMLSLGTINDELIRNIAKIAWKEVMPISDGRATATYRRDMASALLERGLYRLIRRWDNQ

>PBF_20673_UniProt_W7KNV8
MNTKWVGKRVKRIDGPEKVTGELKYMTDYHFDNMVWGKVLRSEYPHAKINSIDIEAAKNLPGVICVLTHKDIPGFNGFGIVVPDQPVLCSDVVRCTGDAVALVAAETLEIAEQALSLIKVDYEPLEVVADAEYALRDSAPKLHPDGNLHSHVKINNGNIEKAFEEADIIVENTFYSPRQMHAFIETEGGWGVMDDEGFLTIRCPGQYAYRDRMQIARSLAYNPERIRVISSPIGGAFGGKDEITVQIYLSLLALHTKGRPVKIHLSREESVIAGIKRHPFKVQMKTAAKKDGTLLANQVKAIGDTGAYASLGGAVIALAIEHSCGPYKIPNVDLEGFCVYTNNGIAGAFRGFGVNQVCMGIETHMDMIAEKLGMDPIELRKKNVYHQGEVSSVGHIVKSSVGTYKTLETAENCELWKNREKYKSEVSEPWKKRGVSVATSFHGIGMGIGLPDYGAASIELLPDGTFLVGVGCEEIGGGNSTAYAQIAAEMLNCDISNIKIVQGDTQKTLDGGTVTASRSTYTGGRAVAAAAPRMTELLIQTAAEMLNLDSSQIDLKPNHISAHGEIIPYKSIYKYLYNHHRATRVEGHFYLPKEKEEIKGSGGAPHHLYGYLTHVVMVEVDTLTGETEVLRVVSIPDAGKVINPQGLEGQTEGGAVMGIGYTLYEDVLIENGYHKTRNFTDYIIPTIRETPLIETFPVEEPEQSGPFGAKGIGEVVMIPIIAAIMSAIYDATGARIRHLPATPERVFNALKDLKKQKVQSSR

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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