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BMC type: BUF1B


Organism: Virgibacillus sp. IO3-P2-C2. Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

  CIL03_13905 (fasta)
     CIL03_13920 (fasta)
         CIL03_13925 (fasta)
                  CIL03_13930 (fasta) HMM00860tp_2_buf1 BUF1B (HMM details)
                    CIL03_13935 (fasta)
                               CIL03_13940 (fasta)
                                          CIL03_13945 (fasta) HMM13382deam_1_buf1 BUF1B (HMM details)
                                              CIL03_13950 (fasta) HMM00857isoch_1_buf1 BUF1B (HMM details)
                                                  CIL03_13955 (fasta) HMM02441_02 BUF1B (HMM details)
                                                            CIL03_13960 (fasta) HMM01977ubiD_1_buf1 BUF1B (HMM details)
                                                              CIL03_13965 (fasta) H_seafoam BUF1B (HMM details)
                                                                     CIL03_13970 (fasta)
                                                                        CIL03_13975 (fasta) H_banana BUF1B (HMM details)
                                                                          CIL03_13980 (fasta) H_fuchsia BUF1B (HMM details)
                                                                               CIL03_13985 (fasta) HMM02441_04 BUF1B (HMM details)
                                                                                 CIL03_13990 (fasta) P_moss BUF1B (HMM details)
                                                                                               CIL03_13995 (fasta) HMM13382deam_1_buf1 BUF1B (HMM details)
                                                                                                    CIL03_14000 (fasta) HMM04199cycl_1 BUF1B (HMM details)
                                                                                                        CIL03_14005 (fasta)
                                                                                                                CIL03_14010 (fasta)
                                                                                                                          CIL03_14015 (fasta) HMM13382deam_1_buf1 BUF1B (HMM details)
                                                                                                                             CIL03_14020 (fasta)
                                                                                                                                 CIL03_14025 (fasta)
                                                                                                                                       CIL03_14030 (fasta)
                                                                                                                                                         CIL03_14035 (fasta)
                                                                                                                                                               CIL03_14040 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_fuchsia
       H_seafoam
       H_banana

BMC-P(map on tree)

       P_moss

(complete list of loci)

Protein sequences:

>CIL03_13905_UniProt_A0A265N8M3
MAKKNDNWSKRRINSSVNPQGLTEDTADQQPKSQLEQRSKKKNTKI

>CIL03_13920_UniProt_A0A265N706
MDFYYEKFDHVQLAAPGGTEDLARSFYSEQLGFKEVEKPSSLRKNGGVWFEAGNIQIHIGIEEPFAPAKKAHPAILVKNIEIMKTFLTEKNIEFSIDDRLPGANRFYVSDPFGNRIEFLEWE

>CIL03_13925_UniProt_A0A265N7M5
MDLLKQKIVKEGKVLSESVLKVDSFLNHQIDPELMEEIGREFTERFKNAGITKILTLESSGIAPSVMAGLRLGVPVIFARKRKSLTLIDHLYSAKVYSYTKKETNEISVSKDYISNDDIVLIIDDFLANGQAVDGLIGIVNQSGASLAGVGIVIEKGFQDGGSIVRKRGIRVESLANITSLADGKVTFNEEDSSI

>CIL03_13930_UniProt_A0A265N737
MKTAALSIQHLLAMYSGAILVPLIVGQALGLTSEQLTYLVAIDILMCGIATILQVVKNRFFGIGLPIVLGCTFTAVGPMIAIGAQYGISAIYGSILVSGLFVILISRFFGKLVRFFPPVVTGSVVTIIGITLIPVAINNMGGGQGASDFGSISNISLAFGTLLFIVLMYRFSKGFTRSISILIGLVAGTIVAAFMGKVNFDAVIEASVFHMVEPFYFGMPTFEWSAILTMILVAMVSLVESTGVYFALSDITKKKLNEKDLSSGYRAEGLAIVIGGIFNAFPYTAFSQNVGLIQMTGVKSKKVILIMGIMLVTLGFIPKIAAVTTIIPTAVLGGAMIAMFGMVVSQGIKMLSNVLTNSPENSMIIACSVGMGLGVTVVPELFSQFPSSVQILTSNGIVAGSVTAIALNIVFNMIPSKKSVSELTEQEV

>CIL03_13935_UniProt_A0A265N742
MNVTLTANESRLLKKTIAQAYNRINQELYATGVVSQRINFLYDRVIIFAQHKRVPAFTALSKNFKELTAYADAALISEFKAKLKQEIEELTGHSVVSVLKDYDTVTEHACCVVIFDKENSPIVDPENR

>CIL03_13940_UniProt_A0A265N8L9
MSKTAVHYPWYKKEDTDAFFALFQNNLANFVIISVSMLGMGFPAEIVFGRVVPGAAIAVLAGNLYYAHMAKRLAIKEQRTDVTALAYGISTPPMFVFLFGVMAPALALTESHEMAWKIAVAACFISGIVEALMGFIGRWIHKNIPRAAMLGALAGLALTFIAGEMMFNTLQIPVIGLVVLAIIIVGIIGKIAMPFKIPATLFAIIVGTLLAYILGYAKLSGVTEGLSQLGFYPFLPTLATIEGLGLLFGTAATIFAVVLPITIYNAIETMNNVEAVGALGDKYDIKESMIVDGIGTMVGPIFGGAFPTTVYMASTGSKWMGAGRGYSILNGIVYVLAAMFGLVAVISSIIPLSAIAPIMVFIGISMIATAYQTSHSKYFPAIAIAMIPYFSNYIMTRFNSGAEEVVAGISSAIVPLGQGALISAIILGAIVVCIIDVDFKRASLFSFSGMLLSFFGIIHAPAIAFNASQEYAIGYLIIGIYFLIMSRTVSQEKQLNKQDELTDRKAN

>CIL03_13945_UniProt_A0A265N7L4
MDLILKNAVIPQGDRKVETNILIDNGEIVGFTNAVNGLAADEIIDIKGNLVVPGCIDPHTHFMDPGFTHRETFTTGTRSAAAGGITTHIDMPCCSKPSVRDKESFHKKIEPLRDQAYIDYCFWGGMTGEDVREGLLDNIYPQIEEGVVAFKVYMTPSVPTFPKVTDAEMLEIFSKIAPTGMPIGVHAENYEICTFYTEKMKKEGRMDGPAWAEARMPLAEKVAIQLIISFAEATGARVHVVHMTTKEGVELVREAKKRGVKVTAETCPHYLVLNAQDSMTERGTFAKIAPPLREKEDNIVHWQGLADGTIDFVGTDHAPYEIETEKDAPDSDIWNSFPGIPGVETMVPILVSEGLNKGRLSLSRFVEVTSRNAAIHYGIYPKKGSMELGSDADFTVIDLDREYTIDEQKTESMAKYNPLHGMELKGKPIQTIVRGKVVYDEDNGGIVGKSGYGEYVKRQSIQRLDRTLKYEVYEENAKEAESQPRREKALINN

>CIL03_13950_UniProt_A0A265N915
MAVLKGKKHALVIIDMLNDFIGEKAALRCENGETIVPKIREAIDFCHENDIQVIHVQEAHRKNDADFRVRPVHAIKGTWGSQFIPELEPEEDKGDYVVQKRRHSAFSFTDFDLFLREEQIDTVVLTGVWTNVCVRSTASDALYHGYNVIALSDATASKDDDMHRSGLRDMDLFGEIMTTDEYKEGAKKKFSQNRQTV

>CIL03_13955_UniProt_A0A265N953
MRIIVGITGASGSIYGYTLIRALHQMGIETHLIATEMGVKVMQFECGVKIKDLKEFAIVHNNQNLFASVASGSFKTDGMVIVPCSMNSLGAIANGVGDNLLSRAASVVMKERRNFVIVPREAPFNLIHLKNMTTLAESGVSILPASPGFYHQPTEIWELVNFMVARILDELGIEHELMERWGEKQ

>CIL03_13960_UniProt_A0A265N7K2
MNPLSMRELIADWEMRELLYRIKKEVNAEYELGAVVKSMKGEQPFLFENVKGYTVPMAAGLGGSRKLMAESIGAAESELIPKMIDSIINPIPTNMVPTAPVHENVVMGPFDLDDFFPIPTFHAEDCGPYYVSGILVVKDLEGKKRYTSIRRMKFIGGNRTNIVITSPELARQYAYLEQKGEPMEVAVMFGVVPAVVLASQFSTHLYHADKLNVAGALLGQALDVVQCKTVDIEVLAEAEIVLEGKILPNVRDSEGLFGELGGYYGGNMPQPIVEMSAITYRDNPISQTIFPSSSEEKLPMGLVREMTLFSTVRQVVENVKAVHITMAAAARFHAVIQIEKKSEGDAKQAAMAAFASDKDLKHVVVVDDDVDIFDSEDVEWAIATRCQADQDIFIVPGAMGSPLESSHNLRGVSAKMGIDATYPLSEKELFKRTSVPIQNINLKDYL

>CIL03_13965_UniProt_A0A265N713
MSAIGLIETRGLTAAVEALDSMAKAANIHLVDLKKVGSGLITVIIEGDVADVSAAIEVGRLAPERTGGELISFNVIPRPHSELKKIL

>CIL03_13970_UniProt_A0A265N8M9
MADVMKQVVQEILQGNKTVISKKVENSTKNPETDSNLKHIKRPNYQRLKKDERLSYTGKSYQTSPNSLRTDDKKSNASKLPKQFNEESISSLHSISLVQGNVPKKNHTHSQERHHQAIKSRIIGNTKNGGCVWFFPKLPKELMGSFHRPLNSASVGVVKMPECLPSYLLIINEVIRNNQGVKFHLSWSKEAGTPFTAELYDDNVDRLGKIMNDIYQKLNRRSFKQYETYTAVSPSPWLSSQMNISSSIDGIAFLEGISYYTNIVLMDLLLKNFETSDFSYEINSNYLLLKGNYHIISKLITELKKEAARLVSSDTMI

>CIL03_13975_UniProt_A0A265N714
MIALGLIETVGYTTAVSAADAAVKAANVEIIGLEKVIGVNGYVGVTIQLTGDVAAVTSAVEAGKKQAEKIGEIISTEVIARAHSDVNEKLLSKFSLPEESKPIKKKAVRKAKKEKPAEIKKESSEADSNVTKTTSSSKKQSKNNSDDKKA

>CIL03_13980_UniProt_A0A265N7N5
MGEALGLVETKGLVGAIEAADAMVKAANVEICGYEKVGFGLVTVMVRGDVGAVKAATDAGADAASRVGELISVHVIPRPHSEIERALLSKGE

>CIL03_13985_UniProt_A0A265N743
MHTNRQSTVVHSTLRELFYRNSKGIAKAHRKTVLVLLFYHMNGMDKGLKVLKDLHENNVRVRICADDQILDHYYVTELAEQVGIDDWITIKDAELQKEHIDHFYIPILPFSTVSDLLNFNDARPAISILLWALMRGKKVSAYPAGADPYHSIWQKSELNHGTAILKHEMKKRLQQIRGFGIQLVENENKILDHFLASIQNESNHVITADIIKNQAKAGKKYIELNQKSIITPLARDTAREFQIEIGENKGR

>CIL03_13990_UniProt_A0A265N752
MEMGVVVGRVTATRKDENLVGTKLLITQSIGMDGTPLNSLPIITVDTVGAGIGERVIFVRGSMASRAVRNKESPVDAAIVGIIDNLECEKFKE

>CIL03_13995_UniProt_A0A265N8M7
MQAENIKKAIQWRKLIDVLLDSNQFADLVLKEGYIINTVTREIYEADVAIKGEYILMVGDASELIGDRTKVVNVKNKFISPGFIDSHMHFESAMLTCTEFSRLSIPTGTTTLIGDPHEIGNVLGVHGMQEMIKEAKTLPNQIYFTVPCAVPDAPGLETAGFEVNSKHMAELLNDPYVQGIGEIQSFSNIHPVYENAPELIDDLVAAVSYADSIGKTVEGNAPGLFAKELAAHIISGGTHVSCHETTTKEEMIEKLRYGISVFMREGSSQRNMAECIRAVTEEGMDSRRAILVSDDMVPEDLLKDGHMNDIVKRTIAQGVDPVEAIQMATINPATHFGFKDVGILAPGKRANIAVIDDLNDMTIDQVYLSGSLAAEKGELTINLGSYTYPETVKKSVKKSPVKAEDLHINASGSRARVRSIVAIPDQNLTGAKEFNMNVAGGVVQPCLKQDVLPLLVVERHGRTGNIGKAFLNGFKMQSGAIAESVAHDTHNIIVTGTNYEDMVTAVNRVISMDGGIAMIKDGKVVGDLPLRVGGLITDELSGREVSEKIAELTRLAKDELGCAIHVPFMHLSFWSLVTSPEWKITDMGLIDVDKFEILSPVVE

>CIL03_14000_UniProt_A0A265N7M4
MAVRLVDLTQEIYQGMPVFPLHQPTLIFPNLTHEESREKVGFEFATNNLLINEHGPTHTDATYEFDPNGKYIDEMPLEYFYGPAVCLDLSHISPDDYITPGELEKALRRSQQVLEKGDIVLLYTGHYNRKYGTDEWLTRYTGLDYDGAKWLAEKGVVNIGIDAPAIDNPKDPKFSGHLVCREYGMSNTENLANLNEIAGKRFLYFGLPLKIRKGTGSPIRAVAVFID

>CIL03_14005_UniProt_A0A265N926
MVSSQQKIRDEILIPPYEGRSALLKPGEELIIIDVDGKQVGDFVCFNRNDPKEFVSPVHMRASLSSIRLKIGDGLYSNKRRPLMSFVGDTVGKHDFFFPACDYYRYKVDYDMEEHPNCHDNLKSALKDYGLGNEPVPDPINLFMNNVLNEVGDYEINEPLSKPGDYVRLKALEEVVIACSTCSQDMAPVNGWKVSSLKMQIMEAN

>CIL03_14010_UniProt_A0A265N7L2
MDAVRFLQEMIRVDSSNPPGNEHKAAKLLAERSESAGIPYDISQFESNRSNFKIHLKGEGKGRLLFCGHMDTVLPGEQPWNHSPFSGEIEEGRMYGRGTSDMKSGLCAMFLAVESLFKEGKKLPKDIIFLATAGEEVDSCGARQYLKEESLDDVEALVIGEPTNEKVVVGHKGALWLEIITTGKTAHGAMPANGINAVEWMRNVMDMAESLKSKWKISSIPLGESSLAITKLNGGVQTNVIPDRCSMHIDIRSIPPQEHEDLISEIKQNLQELFSTEESPDFHINKLLDRPSILTEKTSPVIASALRIKEQNSVHGVSYYTDGAVLNPDSRIPTLIYGPGDEKLAHQPNEFVDVNAYLRSIDFYKELALDMMKE

>CIL03_14015_UniProt_A0A265N723
MRSILIKNAQIITMNFQEEIVYGDLYIEDDRIKQVGGDLGYRADQVIDAKNKTIIPGFIQTHIHLCQTLFRGQADDLELMDWLQKKIWPLEASHDEESSYYSAMLGLGELIQSGTTTIVDMETVNHADSAFQAMAESGIRSLSGKVMMDMGDDVPDLLIEDTNKSIQQSVDLLEKWHQYDNGRIQYAFCPRFVVSCTEELLTSVRDLSNHYNVKVHTHASENQGEIKIVEMQRGMRNVVYLDKIGLANENLILAHCVWLDDEEKGIIKDRGIKMSHCPGSNLKLASGIADIPDMLAIDANISLGADGAPCNNNLDMFNEMRLASLIQKPKHGPTAMDARTVFRMATIGGAKAVGMEDDIGSIEPGKKADIAILDLFKFHTYPSHDVDPISRIVYSATRADVDTTIINGKVVMEKGNVKTIDKDIVLHEADKSINRLLKRIPSIMKV

>CIL03_14020_UniProt_A0A265N8N6
MKTFHFKVNGEEVSVTCPPTKTLLDVLRDQLDLTGSKECCGKGECGSCTILLGGDSVCSCLVLAGQTENVSITTVEGIGLTTKMDVVQQAFSDEGATQCGYCTPGFIVTARSFLNSIDYIPTDDEVKTALGGNLCRCTGYTKIIKAVQTAAQIQQAEKAPS

>CIL03_14025_UniProt_A0A265N724
MIYNGISVIVLAAGFSSRMGRLKALLPWQGIPLIQYQIEQMQKAEINEIIVVLGYQAKRIYEVIEHYNVKTVFNEHYEQGKSSSIRKGAASVNDDAEAIFVSAVDQPVSSSTLKDMTNCLKLTETRGVIPVYKGKRGHPVLFHGSLKKDLSDVKEKTMGLRNILGKNDGQITYLTVDDPSILLNFNKPDDYNNRMQGGL

>CIL03_14030_UniProt_A0A265N7P5
MRVSEIDLVSPSSVDKCLYMLRDHDKTFRLLAGGTDAIVQMKDGKRIPDIWINIKNLTELRYIREEKEGIHIGPLTTHTDIVKSELLQKKADVLVGASMEVGAIQLQNMGTVGGNIGTASPAGDTIPALFVLDAQIELSSFNEKRTIPINEFFTGPGKTVQKQNEMITNIIIQPQSENEIGIFEKLGPRKAQSISIVNVAITLRMGSNPRECLEGKIAFGSVGPTIIRSKKCEKMLALGPLDDTAIQDIAGAAWKEVMPISDVRASAKYRRSMASALLERGLYRLMNRWDAR

>CIL03_14035_UniProt_A0A265N753
MSKEVKDVQKLENQQQLKWVGKSVKRIDGPAKVTGEQKYKTDFNYPNMVWGKVLRARYPFAKIKGIDTSKAEAHPDAVCVLTHKDIPGFNGFGIVTPDQPVLCEDVVRCTGDAVALVAAESLEAAEEAINLIEVDYEPLEPVTDAEAAMIQGAPQLHPDGNIHSHVTIVNGDIDKGFEEADFIFENTFYSPRQMHAFIETEGGWGKLEEDGSLTIQCPAQYGHRDKLQIARALALNPERIHVYSSPNGGGFGGKDEITVQIYLALLAQNTDGRPVKIHLSREESVIAGIKRHPFKVTVKTGAKKDGTLIANKVRAVADTGAYASLGGAVTALAIEHASGPYKIPNVDMEGFCVYTNNGIAGAFRGFGVNQVCVGIETHIDMLAEKTGLDPIEIRKKNAYLQGDRSSLGHVVSSSVGTIETLMEAEECDLWVNRELYKSQVSEPWKKRGVAAATSFHGVGMGIGTPDYGAATIELLKDGRFKVGVAIEEIGTGNGTVYAQVAAECLRCEVDNIAVIQGDTKETLDSGTISASRSTYTGGRAIATAAPNMITLLTEAAAEILNVSKSEIELADNKLIVAGDESQSVNYKQIYEKLYEQHRSMRVEGHFYLPREKKELKNSGGAPHHLYGYMTHVVMVEVDTLTGETDVLHVVAIPDVGKVLNPQGLEGQSEGGAVMGIGYTLYEDILIEEGYHKTKNFTDYIIPTIRETPIIETIPVESNEKSGPFGAKGIAEVVMIPIIPAIMAAIHDATGARINHLPATPERIYKAIQETKKQTLVSR

>CIL03_14040_UniProt_A0A265N761
MSHRLYEQLSESVSKHQDAALITITDHPDVSVVGSKFLLQKNGTLYDESEFPLELHSEIIKYCLPLLRQNKTKTVQIQLNGKLIECYVEVFPVPSHLIVAGAGHVSEPVAEIGKMLGFYVTVIDDRLKFANDERFPFADEVVCSSYIDFFRNVPITPKTYILLLTRGHKFDVVSLQELLRREESMDVEERTKYIGMIGSRRRIAGVFEQLKNKFADHNFVNIHSPVGLDIGAQTPTEIAISILAEILKIKNSSSGNSLKEKISSYSKLKFRERSKK

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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