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BMC type: BUF1


Organism: Paraclostridium benzoelyticum. Bacteria; Firmicutes; Clostridia; Clostridiales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       VN21_00905 (fasta) HMMreg00126_1_mix GRM3B (HMM details)
                VN21_00910 (fasta)
                         VN21_00915 (fasta)
                                  VN21_00920 (fasta) HMMreg00072_4_pdu1d PDU1F (HMM details)
                                       VN21_00925 (fasta) HMMreg00072_2_pdugrm EUT2E (HMM details)
                                                         VN21_00930 (fasta)
                                                              VN21_00935 (fasta)
                                                                 VN21_00940 (fasta)
                                                                     VN21_00945 (fasta)
                                                                                 VN21_00950 (fasta) HMM13382deam_1_buf1 BUF1 (HMM details)
                                                                                  VN21_00955 (fasta) P_moss BUF1 (HMM details)
                                                                                    VN21_00960 (fasta) HMM02441_07 BUF1 (HMM details)
                                                                                      VN21_00965 (fasta) H_fuchsia BUF1 (HMM details)
                                                                                        VN21_00970 (fasta) H_banana BUF1 (HMM details)
                                                                                          VN21_00975 (fasta)
                                                                                           VN21_00980 (fasta) H_treeGreen BUF1 (HMM details)
                                                                                                    VN21_00985 (fasta) HMM01977ubiD_1_buf1 BUF1 (HMM details)
                                                                                                        VN21_00990 (fasta) HMM02441_02 BUF1 (HMM details)
                                                                                                            VN21_00995 (fasta) HMM00857isoch_1_buf1 BUF1 (HMM details)
                                                                                                                       VN21_01000 (fasta) HMM13382deam_1_buf1 BUF1 (HMM details)
                                                                                                                             VN21_01005 (fasta)
                                                                                                                                  VN21_01010 (fasta) HMM04199cycl_1 BUF1 (HMM details)
                                                                                                                                           VN21_01015 (fasta) HMM00860tp_2_buf1 BUF1 (HMM details)
                                                                                                                                                    VN21_01020 (fasta)
                                                                                                                                                       VN21_01025 (fasta)
                                                                                                                                                               VN21_01030 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_fuchsia
       H_treeGreen
       H_banana

BMC-P(map on tree)

       P_moss

(complete list of loci)

Protein sequences:

>VN21_00905_UniProt_A0A0M3DN55
MVTKLDLYKVFCQVGKSKSFSKASKELYMTQPAVSQAIMQLERELDIRLFNRTPKGVSLTNEGKLLFEYVNSAINLINVGEEKILEFKDLTAGELKIGVGDTISRYFLLPYLEFFHNRYPNLKFKIINGTTSALCALIKSGEIDIAICNFPIDDNSLELIPCGEVRDIFVCGEKYKDLSTAKISLEEIVKYPLIFLEPNSNSRKYVEKFMLSKGIKISPDFELGSFDLLLEFAKINLGIACVVKEFSEDYLEKGVLYEVNILKEIPSRSIGVCYLKSVPLSLASTKFVEILSSDNPSLKIK

>VN21_00910_UniProt_A0A0M3DKH7
MERVIGTVVRGLRCPIIKEGDKIEDIVVESVLKASEVEGFTINDKDIVTVTESVVARAQGNYASIDNIAKDVKSKFGDDTIGVIFPILSRNRFAICLRGIAKGAKKIVLMLSYPSDEVGNQLVDLDVLDDKGVNPWADVLTEQEFRNLFGYNKHTFTGVDYIDYYKSLVEEYGVECEVIFSNNPKTILNYTKSVLTCDIHTRFRTKKILKANGGEKIYGLDNILCESIDGSGCNETYGLLGSNKSTEETVKLFPRNCQPIVDNIQSILKEKTGRDVEVMIYGDGAFKDPVGNIWELADPVVSPAFTSGLNGTPNEIKLKYLADNNFSHLDGEELKKAISEYIKNKESDLVGSMESQGTTPRRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK

>VN21_00915_UniProt_A0A0M3DJW7
MLNSALMGAFVGILTWMFLGIVNVGIHFIWRTLKDFLNIKYWTLIVASIGGILVGITQKHFGEYPKYMDQTLEEFKKNKRVEYKSLKYSIINSLTILFFGASVGPEAALSGIAGGIITFVGDKMKERFKKKNVVNQYSDELIEYSMQVSTGLVFRAPLFGIYTLSEKSSENRHIIKKIKVIVYTVTTIAGFLVFILLSKLDNRPSFIVKFGQSNIGLKEIIWFIPLIIIAMLLAYIYKMYALALHRILKPIENKKILKGIIGGLGIGILGTVFPWILFSGEHGLRELVVEWNNISAYMLILLSLVKLLLTEICLSTGHRGGHIFPLIFSGSCLAYGVSKLFSIDPVFCLAIIVTGLASKAIGNMFVAIFLLIFFFPINTILPMVLSAAIGKMINDIETKLVYKNQSIKK

>VN21_00920_UniProt_A0A0M3DN16
MELYRNSEIKKTLIIIVITNLITFAILALVFFISYDKLKIDYIENKAYTIGYLSSKYPNLENEIVSLSFSNVNKKDLDYGLDIIKDYGYSTDLNMKFIGNFNNIFVITFVFIGIAMLVLTGIHIKINNSYHKRVYIKLNKLTQASKEILASNYDVDIDEYKEGEFSKISYAFVQMRDVIKNQMNIINQEKEFLVRIMSDISHQLKTPLASTMMFNEIMLNKNLDEAQRNKFLKESETQLERMEWMIKSLLNLSKIDAKAIEFRKNEINLNLVVKEVLASLYMLSKKNNVEMVFEEYDKAIIYADGEWIKEALMNIVKNSIEHSRDSSVRVSIEKSKVFTKVIIKDSGQGIKKEDLPNIFNRFYKSNKPNSVGIGLSLSKSIVESNNGYIEVSSELGVGSQFRVIFY

>VN21_00925_UniProt_A0A0M3DJU2
MKKILLVEDDEALAMGTEYSLIEEGFEVKVVGSVEDAKSEIENNNYDLAILDINLPDGTGYDVCKFIRKNKDMSIIFLTALDEEVNIVLGLDIGADDYITKPFRIRELLSRIKAVLRRSNKYNSVKRYLKSKDIIVDTFSINIKKNRQEILLTTQEYKLLLSFMKNPNQFLSRDDLLEAVFKKDYCYVDDNTISVYIKRLRDKIEDNPKEPKYIVNKRGMGYKWNMEVEEVM

>VN21_00930_UniProt_A0A0M3DL23
MINNYKSVSNRYLKYNKKRTQLIIIGIILSVALISSIGTFIITLQNSIVQNEMNLTGNYHLTLSNTDKEKFEKIKNNPQIEFISPEKEMVYDNFAGDKKIDVKSGNKNLFNIENIKIKDGRLPEKSNEIVIENWVLKYFENPVNIGDKLKIDNKEYTLVGIASDKRESKANGVTNGYTLDNNLEKDIKNLPIYIKIKDNANKREVIDDITKLVGKNNIVENETLLRLTGDSKDKSMNVALFGIVSVVVGIVVIATIMLIYNAFNISIAERLKQFGQLKAMGATKKQIKTLVLREATTMIVIAIPIGVFLGTISIFAILGMFKLSTGQEDINFIISPMVIIGSMLLGAISVYISALLPAIKVSKISPLVAISSSNLITKEKIKKSRRKSRLNKILKVNHIMAIKNIRRNKKRFYITSMSMAMSVTLFISFISFAKYAGNFTDKITEENKMSFRIVQNNEGIGKYSIDDNMLKSTETLSDIGNIYSSYTPIKLKAIVDESVIPKIVKDQNYSFIKNVKYDKEDYKYLSVLMNAFDNNKLETLKPYISNGSIDNLKENEIIVIKNEKMPKGVLSPVMNLKVGDEIKIDPNYFYKEERLTPEQYVNGVKPKVEENAKESYDEDQLITLKVGAVIDDAPYDLGTSGIQKVILPTENLKSIIKNNDVAKGQFDRESIDIKCADGNVDKVEKELNKFIKTYPNFNVINVEDLNKSVMVSNLLPIILLLGFTVVITLISSINIVNTISTNITIRRKELASLKAIGMTSKELKSMICLEGMCFGIYGGILGSIVGTILSYIIYLRFTELKGFEYNIPYIEIIVAIVGVIVIGYVSALIPMKKLRKSNIIETIKAN

>VN21_00935_UniProt_A0A0M3DN60
MKVLEVRNLKKYYGQGENKVKAIDNVSFNINKGEFVAVVGQSGSGKSTLLNLLGGLDRPSSGSVVINENEIYKLDDDRLSIFRRRNIGFIFQFFNLIPVLDVEENIAFPTLLDNEKVDSKYLDEIINTLGLKKRRNHLPSELSGGQQQRVSIGRALINKPAIILADEPTGNLDSKTTKEVIELLKCTAKKYNQTLILITHDEKVAEQADRVITVSDGKIIDDVYNA

>VN21_00940_UniProt_A0A0M3DKI0
MKKQIYNKLDELGIEYKILEHDEVFTADEFYAVTRDMPGHHCKNLFLKNSNKSINFLVVAKHDKAVDLKEIKSQIRSSRLSFDSPEKLYELMKVTPGSVNPFSIINDEDSVVEVIVDNDLLDGQNLNFHPAINTETFNISGDDFIKFLDYIENKVVKISI

>VN21_00945_UniProt_A0A0M3DN20
MSIYEDKRLKHCEKFESNVIEDNWGFSYIESNVNFNSVSVSVLPKNAVWEDMEGFVDRKYGPFGYSIRNENDEIIASLIFYFSYSCKGTFNGKGSYLADATVSPKIISASPGYYLDCNVTASEPKNYGTKENPAPGVTLRLQVKISSYRDLTNCNVCGTSKLENMDNESICTNQNEIDCNKSNNLNFIYPHCSCDGLNSIEFFAIATVRGDGQVNLISAQCY

>VN21_00950_UniProt_A0A0M3DL49
MSNKHHADIVLYGGNIVNVLTKEIYTGDIAINGKYILMVGNCEDLIGENTIVVDVRGKYLSPGFIDSHMHFESSMLTVTEFSRLSIPSGTTTLIADPHEIGNALGTVGMKAMADEASYVPNYVRFVVPALTPDCPSLETAGVDVSSKDMEDLLNYKNIIGIGELQGFSNAKHVYNNTPEIITDLLASTTYAKSIGKIVDGNAPELFSNELAAHIVCTGGKCSCHETTTKSECIEKLRQGVYVFMREGSTQKNMGECIKAITEEHLDSRRCILATDDMVAKDLQELGHMNEIIKRTIRAGINPVEAIQMATINPATYFNLEDRGVLAPSKVADIAIINNLNDMDIEAVFIEGELVASNKKLLIDLPKYTYPDSVKNSIKIDQINEKDIGIISDEKEVVARCIKAIPDQNLTECMEVKLKTRDNVVEADTTNDILHIACIERYGRNNNIGKAFVNGFGLKKGAFAESIAHDTHNITVVGTNINDMVVAVNKVIEMGGGIAVVNNGRVLEELRLNVGGLITDELTGSEVSEKIDLLENVVSKDLGGNLHAPFMHLSFLALSTSPKWKITDKGLIDVNNFEVLSPIVN

>VN21_00955_UniProt_A0A0M3DJU7
MQIGKVIGTVVATKKDDSLIGSKLMITQPLNLKNEIDGKPLIAVDTVGAGIGELVIYTEGTAARNATKKLQSSINAAIIGIVDNIDVWED

>VN21_00960_UniProt_A0A0M3DL28
MKEKIDFTKNILNKISKNIKKDNKKESSNCKTIISNNKFNSIEDNSYVMIPTNHKNIKEILDLLNNNHTKYKNETINHKNNKDEVRKEIITLNDIMNLNEGTISISKNTIITPMAKDYIKQKKIKIEIGG

>VN21_00965_UniProt_A0A0M3DN65
MGQALGMIETKGLVGAVEAADAMVKSANVTLMGYEKIGFGLVTVMVSGDVGAVKAAVDAGAEAARNVGELHSVHVIPRPHSEVERVILSRD

>VN21_00970_UniProt_A0A0M3DKI3
MRKALGMIEAVGLTTAIAALDAASKAADITLVGYDKVIGVEKAVSVTIHIAGEVAAVNAAIDAGVEAGNKVGKIVSSKTIARPHEEIDVLIKEFEKNLKVKNINKKVIENKSEANN

>VN21_00975_UniProt_A0A0M3DN26
MADLLTKVVMKNISNKALNKKICKKEENKKIENINCKEVEILKSILYKNSKKNNLNNLNNEKHINKEMKFKSLKDLNHNIVVDKNIHTNNKCKNMISLKDLAK

>VN21_00980_UniProt_A0A0M3DJV2
MKALGIVEVKSLIGAIQAADTMLKSADVELVDIDLVGSGIVAAIIKGDVAAVKAAVENGEESAGRLAEIISTNVIARPHDEVSKIL

>VN21_00985_UniProt_A0A0M3DL34
MESQMLRFTLDKLEKSGYLKTCKKRVDKEFELGAVLRYFDNEVPIVFKNIKNYDIDLVGGVYGNRKIFNDLMDVNEENRIYKFMDAIANPKSYKEVKSGPIAQNVITKNIDINKLFPIPTSHEKDSSNFITAGMLIIKDPETDDTHMAVRRFQINDKDNISALVSGASPHLNKIIKKAELNNEKLECAIVLGYDAEFLIASQISSSKYGLDKYEVYSSLKNEPLEVIKCSSVDILVPAFCEIVIEGYLNPNKKIKEGPFGELMGYYGEVSNHPTIDVKTIMHRDNPIFQHAFPSREEHLSNGLIREVEIYSALKNIVDVIDVNVTIGGGCRLHGVVKINKKNEGDGKSSILTALGSSKDLKHVVIVDDDVDIYNYKDVEFAIASRVQASEDVIIIPNALGSPLEASHVNKGLSDKMGIDATKPLDNELFNRAIIPGYENINIDDYF

>VN21_00990_UniProt_A0A0M3DN71
MKIVVGISGGSGAIYALGILQALRELGVESHLVVSNMGEYVVEHECGVSLDELKKMADFYYENYDLAAPIASGSFKTDGMIIVPCSMKTLASVAHGFSESLLTRCADVCIKDRRKLVLLPRETPLSSIHLENMLKLSNIGVTIMPPTPGFYNHPQDISDIVTSIIGRCLDQFDIEHNLLKRWGE

>VN21_00995_UniProt_A0A0M3DKI8
MKRHAILVIDMLNDFVGEKAPLRCPGGEKIIPDLQKLFAWVRERNARGLDDVQLVHIQEAHRKNDADFRVRPVHAVKGTWGSDFIKELYPQGEEYIVPKRRHSGFAHTDLDLYLREENIDTVVVTGVWTNVCVRSTASDALYNAYKVITLSDGVHSKNDEMHEAGLRDLSIFTKVMTIDEYIDAWEKNLDPWVGGGDTENKVE

>VN21_01000_UniProt_A0A0M3DN30
MDLIIKNANIPQGDEMVLTNILVKDEKIVGFVDDINMIDAKEIIDANKNLVMPGCIDSHTHFMYQGFPHRENFLTGTAAAATGGVTTIIDMPCCSVPSVRSVEQLETKLGICGPQAVVDYAMWGGVTGEDVREGWMNNVKEQADYGVVAFKVYMTPSVPTYPRVTDPEMFECFKAVSETGLPIGIHAENFAMCDFYVNKFKEEGRLDGPAWAEARMELAEKVAIELGISFAEASKARLHIVHMSTGVGAKLVKEAKMRGLDVTSESCPHYLTLNYQDAMTEYGPLAKIAPPLRTKKDNVEHWKGINDGSIDFIATDHAPYEIESEKLKEGTNIWTSFPGIPGVETMVPVIVSEGYNKGRISLSKLVDILSTNAAKHYGLYPKKGALNIGSDADFAIIDLNKEWTIKNENLVTMCGYTPLEGMKLKGRIIKTIVRGNLVYEDGEAGVLGNLENYDVLFNNPEELTSGEYKVSYRKDHPELIVEHVKNIKGIKVKPGFGKFIKRQTISKLDKNIKF

>VN21_01005_UniProt_A0A0M3DJV8
MEKKQYVLAVPNFSNGKDKDVIEAIVDVVRNSNVKLVSYEPEEDFNRTVVTFIGEPEDVKDALVNMAKKSIELIDMREHKGTHPRIGAQDTLPIFPLKNITIEECVKLSKEIGERLHKESKVPIYFAGESASTEERKAFAYIRKGQYEGVRDLLKEIKDDQSRQEEYNNRKPDLSVDGLLSEKAGATLSSAEVNGLTAYNIFLGTENVEIAKKIAKALRGPSGGFSTVRAVGIKFPEKEGVVVSMNLLDCYQTPIHRAFEFVKREAERYGVIVTGSQLVGPIKLDYVLDTFNYYLQLEDFRNEQVLETHLMDM

>VN21_01010_UniProt_A0A0M3DL38
MGFKVIDLSQEIYQGMSVFPMHQPTFIMTNMTHEENMKRTGSKTLGFSARNLLISEHGGTHSDAVWEYKSSGKTIDNMPLDYFFGSAICIDLSNIPYSRYIEIKDIEISLKKSNLQIEKGDILLMYTGHYDRNFNTDKWQTEYSGLSYDAAKYLATSGVVNIGVDAPAIDHPKDLNFSGHLVCGEYDITNTENLCNLDQLVGKRFLYFGLPLKIREGSGSPIRAIALLEDSIL

>VN21_01015_UniProt_A0A0M3DN76
MSENSSSQKIKNQNNSGLLYKIEDRPNLQLSILLGFQHIVAAFGGIVAVPLVVGPAIGLDVQTTALMVSAAIFVAGIATIIQVRGVSKVGSKLPCIMGTDFTFVGPSIVVGSSMGLAGIFGATILGSFIEMILSRFIKPLMKFFPPVVTGTVVTLIGLTLIPVAMDWCAGGVGSPTYGSITNICIALLVMIIVIAFNIYGKGVLSSASILIGMLIGYIVCIPLGLVDFTPVKDASWIGFPGIPLVLKHGIKFSLAGVAPFVIAYLVTTIETVGCLIAIGEASEKETSREEISGGVLADGIGSFIAGFLGAGPNTSFSQNVGLIPITKVASRHVVIMSGIIMMILGVFPKLGALVASIPNPVLGGAGVVMFGVVAASGIKTLSRVDMNNRNLIIISISLALGLGITTRPDLLLNLPDSLKMLFGSGISTGTIFALTLNLLLRDKNNTI

>VN21_01020_UniProt_A0A0M3DKJ2
MELYKINGILNLNLNIAATIALTCFLIILGKIVKKRISVLDRLCIPGPVIGGIFFALLVFFLNQFNILNIVLDTSLQSTFMVAFFTTVGIGASFSLIKKGGKSVLIYWIFCIILIFSQNIIGLLGALLTGLDPLLGLMCGAISMGGGHGTSATFGPTLESMGVVGANTIGLAAATLGLISGGFIGAPTSKFLIEKYKLKPKDSLSNNLHNHIQIEDDINSEIAIASDSKVSSKLDSSEFIKHIFILTTCMSLGYVVSNFIGKITGYALPEYVGGILVAMLFRNSNDKFKFVDVDYSCFELLGDISLNLFLTMALMSIKLWELKTLGLPMLIIVLMQVLFIVLFTIFVMFKLLGKDYDAAVMVGGFIGHELGATPNALANLNSICSRYGYSEKAFFTIPIVCAFLIDLVAIPTIIMFINILS

>VN21_01025_UniProt_A0A0M3DN35
MKKVIVGILIGIVVVLGGCAAMFTAGVSSVDKAVNQVKEDTVKNDSKVQDLAKDMSWDVEKDQFTTKIVGTFENKSNEKIDYLQFDYKLIDKEGTVIESSFTNETDIMPKEKRKVEILCSKNNFDKYEITAKSSTF

>VN21_01030_UniProt_A0A0M3DJW3
MNIDEEYKLSLYEELKSIHKSRKSEIFLVQNTLDEKFYIKRVLKEYTLQVYESLNHIESKNLAKVYEFFEYEDKLIIIEEFISGHTLQEILKIDGKLSEDAVAKYMIDLCCVLKKIHNLNPCIIHRDIKPANIMISNDGVLKLIDFDIARIYKYGENMDTTLLGTKGYASPEQFGFDQTDCRSDIYAIGIMMNVLTTGKHTKEIESDGKLKDIIKKCTKISANERYQSVEDLKVDLEKLINLDYKEGKKLYKLNKISDNDIKDLNINMKKNNNLLDILPGFRSRNKLNMMLAILWYLFLITGLVFVDSTTTFIENILVIGLLLSLFLLYTNFLNITSRLPMVRSKVRYFSVFGYIIYSFMLFMVFGLGLELVK

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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