Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: BUF1


Organism: Clostridium purinilyticum. Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

                                    CLPU_29c00020 (fasta) HMM13382deam_1_buf1 BUF1 (HMM details)
                                          CLPU_29c00030 (fasta) P_moss BUF1 (HMM details)
                                                           CLPU_29c00040 (fasta) HMM02441_04 BUF1 (HMM details)
                                                                CLPU_29c00050 (fasta) H_fuchsia BUF1 (HMM details)
                                                                       CLPU_29c00060 (fasta) H_banana BUF1 (HMM details)
                                                                                   CLPU_29c00070 (fasta)
                                                                                        CLPU_29c00080 (fasta) H_treeGreen BUF1 (HMM details)
                                                                                                                  CLPU_29c00090 (fasta) HMM01977ubiD_1_buf1 BUF1 (HMM details)
                                                                                                                            CLPU_29c00100 (fasta) HMM02441_02 BUF1 (HMM details)
                                                                                                                                       CLPU_29c00110 (fasta) HMM00857isoch_1_buf1 BUF1 (HMM details)
                                                                                                                                                                      CLPU_29c00120 (fasta) HMM13382deam_1_buf1 BUF1 (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_fuchsia
       H_treeGreen
       H_banana

BMC-P(map on tree)

       P_moss

(complete list of loci)

Protein sequences:

>CLPU_29c00020_UniProt_A0A0L0W683
MLKPENIKQAMEYRELIDVLMADDRFADVVLYNGNVINVITREVYTADIAIKGDYIALVGDCQSLIGPDTVVVDVRGKYLSPGFMDSHMHFESSMLTITEFSRLSIPSGTTTLMADPHEIGNALGPVAMKAMADECNVVPNFVRLQVPALTPDAPSLETAGVDVNSKDMEDLLNYPNIYGIGELQGFSLTKHVYRNTPEIITDLLASTTYAKSLGKPVDGNAPELFGADLAAHIICCGGTCSDHETTTKEECVEKLRQGVYVFMREGSTQRNMSECIRAVTEEGLDSRRLVLVSDDMVAEDLEKHGHMNDIVRRTIREGVDPIEAIQMVTINPATYWGLNDRGALLPGRVADIAVISDLKEMTVEAVFIKGQLVASQGKLLIDLPKYTYPDVVKNSVRRNPITEADLEIHADGNTATARYIQAIPDQNLTETGEAQVRVNRGIVEADVNQDVIYLACLERYGRNGNIGKCMVKGIGLKQGAFAQSIAHDTHNITVTGTNLRDMVAAVNRVIEMGGGVAVANNGRVLDELALPVGGLITDELTGQEVSAKIASLESTVRDQLGGTLHAPFMHVSFLALSTSPKWKITDKGLVDVNNFEILDPIVK

>CLPU_29c00030_UniProt_A0A0L0W693
MNLGRVIGTLVATRKDDSLIGSKLMITQPLDIDYNPVGDPFIAVDTVGAGIGEVIIYAEGTASRNAAKKHEAAIDAAIIGIVDNMDVYKDVLER

>CLPU_29c00040_UniProt_A0A0L0W701
MNKYTLTSDVMEELIQRINKGSKRKNSTNTIDFGINASKTNGIIDDKYVGYSSHHILVIFTGTDVGLTESLRELSRVKKYGFTFDVAFSYSGAQVIGESGINHIKSVLSPNKVYFEEDQLIFGDIIESVDGILVTMTTQDTAAKLTLGIQDNFISTLLWQAIWHGKIVLMDFDNVIRYRGTESKSPIQQQIINEYVDKLNKMSVISVDKKSYVVEMLKKFKNVSLNNDGEQSQSLQQPVNTNSESERRIITEKDLLEIAGDSKEVTVPLKAIVTPLAIDTAKKQSIKIIKK

>CLPU_29c00050_UniProt_A0A0L0W6D1
MSQALGMVETKGLVGAVEAADAMVKAANVTLIGYEKIGFGLVTVMVRGDVGAVKAATDAGAEAARSVGELISVHVIPRPHSEVERVLSKGE

>CLPU_29c00060_UniProt_A0A0L0W6D8
MRAALGLIEAVGLTTAITALDAASKAADVKLVGFDKVIGVEKTISVTIHIAGEVAAVRAAVDAGVEAANRIGKVVSSHVIPRPHDEIDKLMAEFEKNLKAKRELKSDDKPKKIEESKKKEEATIKASK

>CLPU_29c00070_UniProt_A0A0L0W689
MANPLARVVMRNISQMSGKVGTGVNTYSSSFKTANLNNREEQLLVSLLNKNGNSSTKVVNTSSSSYSTGRSNSPVNIANNLKTLDSLAAGRKNDSVENNSNTNNYNLNNNYENRNYLNKSTINTGSRNLVQSLSIDDLISGKDKKKPENIIKSVSKNKSGMMSLSDLAGTAKTSSDSNDAKPQPEPNVKNTLVRSSVLNNLETYIPKVTLDSIGKKGSLF

>CLPU_29c00080_UniProt_A0A0L0W698
MRQAIGMVETRSLVAALQAADTMVKSADVHIVDLNFVGSGLIAAIVSGEVAAVQAAVENATETAKGLGEIISSNVIPRPHEEVDKMLDVLL

>CLPU_29c00090_UniProt_A0A0L0W704
METQMLRATMSKLQELGQLEVCNVEVDPKYELGAVLRYFNNQKPILFNNVKGYNMPVMGALYGNRQLYYDLMGVTPENRLYKFMDAIANPQPYKIVSNGPIKENIVTRNIDIQRMFPVPTSHEKDAGSFITAGMLIVKDSETGESHMAVRRFQVRGGNIINALVSGHSPRLRKQLEKCNAMNKPLECAVVLGYDATYLLASQISSTRYGLDKYAVDSALRGEPLELVKCYSVDLEVPAYAEMVLEGHIIPNRLEVEGPFGELMGYYGDVAPNPVMEVTTVMHRNNPIFQHAFPCREEHLANGLIREAEVFSSVKNLVDAKDVNITIGGGCRLHGIISIDKKKDGDGKTAIIGALASGYDIKHVVIVDTDIDIYDPSSVELALASRVQASEDLVTIPGALGSGLEASHVARGLTDKLGIDATKPLGEKSHLFELAEIPGFEGELDIEKYLPGVKK

>CLPU_29c00100_UniProt_A0A0L0W6D5
MRVIVGISGGSGAIYGVALLKVLQQLNIETHLVVSTLGEYVTQHECGMSLEELKGLATYYHDNKDLAASIASGSFKTDAMIIAPCSMKTVAAVANGLSDNLLTRAADVIIKENRKLVVIPRETPLSSIHLENMLKLSRLGVTVLPASPGFYNHPQSIGDMVSSIVGRALDQIGVEHNLIERWGE

>CLPU_29c00110_UniProt_A0A0L0W6E3
MPRYGIVVIDMLNDFIGEKAPLRCPGGEEIVPNLQKLFKWVRERNAQGKDDVQLIHIQEAHRKNDADFRVRPVHAVKGTWGSDFIKELYPEGEEYTIPKRRHSSFWHTDLDLYLREENLDTVVVTGVWTNVCVRSTAADALALAYRVITLSDGVHSKNQAQHEHGLVDLSIFTKVMTIDEFTSAIDAGKDAWAGAGDQENKVE

>CLPU_29c00120_UniProt_A0A0L0W692
MYDLILKNARIPQGDDTIVTNILVRDEKIAGFTDCIEEVQAKEIIDIEGQLTLPGCIDSHTHFMYQGFPHRENFLTGTAAAATGGITTVIDMPCCSVPSARSVEQLQLKIDLCQPQSLVDFAMWGGVTGEDVREDWMHNVKEQADYGVVAFKVYMTPSVPTYPRVTDPEMLECFRAVAETGLPIGIHAENFAMCDFYVKKFQKEGRMDGPAWAEARMELAEKVAIELGISFAEDTGARLHIVHMSTGIGAKLVGEAKKRGINVTSETCPHYLTLNYQDAMSEYGAFAKIAPPLRTKRDNEELWEGLNNGSVDFIATDHAPYEIESEKAKEGMNIWTAFPGIPGVETMVPVLVSEGYNKGRLSLSKLVDILSTNAAKHYGLYPKKGALNIGSDADFTVIDLDREWTITKDMVTMCGYNPLEGLKLKGKPVKTIVRGHIVYQDGEEGALPSLTDEELKTIVHEYPAGVEEKYSGVFEGFPHLHSAEYERSYRKEHPEVIDEHIRGIKGIMVKPGFGQFVKRQSIQVLPKTITY

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
© www.kerfeldlab.org, 2022